; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004619 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004619
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionserine/arginine-rich splicing factor SR45
Genome locationscaffold995:731855..733714
RNA-Seq ExpressionMS004619
SyntenyMS004619
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034201 - RNPS1, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136021.1 serine/arginine-rich splicing factor SR45 isoform X1 [Momordica charantia]1.0e-11497.42Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT     VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT

Query:  PPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
        PPRTVAIAPKRDGPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
Subjt:  PPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS

Query:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
        PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Subjt:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR

XP_022136031.1 serine/arginine-rich splicing factor SR45 isoform X2 [Momordica charantia]1.4e-11699.56Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV

Query:  AIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRR
        AIAPKRDGPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRR
Subjt:  AIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRR

Query:  HRSPPRPSPRRIRGSPVRRRSPPPPRRR
        HRSPPRPSPRRIRGSPVRRRSPPPPRRR
Subjt:  HRSPPRPSPRRIRGSPVRRRSPPPPRRR

XP_022136040.1 serine/arginine-rich splicing factor SR45 isoform X3 [Momordica charantia]1.0e-11497.42Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT     VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT

Query:  PPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
        PPRTVAIAPKRDGPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
Subjt:  PPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS

Query:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
        PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Subjt:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR

XP_022136048.1 serine/arginine-rich splicing factor SR45 isoform X4 [Momordica charantia]1.0e-11497.42Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT     VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT

Query:  PPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
        PPRTVAIAPKRDGPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
Subjt:  PPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS

Query:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
        PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Subjt:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR

XP_031740559.1 serine/arginine-rich splicing factor SR45 [Cucumis sativus]1.7e-10694.35Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV
        RKPSPVRESLVLHIDALSRNVHEGHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTR DAEKAQVYMDGAQIDGNVIR RFTLPQRQKMPTPPRTV
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV

Query:  AIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDS-PPRRRPASPIR-GRSPSPLP
        A  PKRDGPKPENVG DAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGS PRRQPDSPRRRP+SPPRRR+ESPFRRDS PPRRRPASP+R GRSPSPL 
Subjt:  AIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDS-PPRRRPASPIR-GRSPSPLP

Query:  RRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
        RRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Subjt:  RRHRSPPRPSPRRIRGSPVRRRSPPPPRRR

TrEMBL top hitse value%identityAlignment
A0A0A0KZM9 RRM domain-containing protein8.3e-10794.35Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV
        RKPSPVRESLVLHIDALSRNVHEGHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTR DAEKAQVYMDGAQIDGNVIR RFTLPQRQKMPTPPRTV
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV

Query:  AIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDS-PPRRRPASPIR-GRSPSPLP
        A  PKRDGPKPENVG DAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGS PRRQPDSPRRRP+SPPRRR+ESPFRRDS PPRRRPASP+R GRSPSPL 
Subjt:  AIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDS-PPRRRPASPIR-GRSPSPLP

Query:  RRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
        RRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Subjt:  RRHRSPPRPSPRRIRGSPVRRRSPPPPRRR

A0A6J1C2C4 serine/arginine-rich splicing factor SR45 isoform X14.9e-11597.42Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT     VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT

Query:  PPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
        PPRTVAIAPKRDGPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
Subjt:  PPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS

Query:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
        PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Subjt:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR

A0A6J1C2D4 serine/arginine-rich splicing factor SR45 isoform X26.8e-11799.56Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV

Query:  AIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRR
        AIAPKRDGPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRR
Subjt:  AIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRR

Query:  HRSPPRPSPRRIRGSPVRRRSPPPPRRR
        HRSPPRPSPRRIRGSPVRRRSPPPPRRR
Subjt:  HRSPPRPSPRRIRGSPVRRRSPPPPRRR

A0A6J1C2R4 serine/arginine-rich splicing factor SR45 isoform X34.9e-11597.42Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT     VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT

Query:  PPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
        PPRTVAIAPKRDGPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
Subjt:  PPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS

Query:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
        PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Subjt:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR

A0A6J1C6J2 serine/arginine-rich splicing factor SR45 isoform X44.9e-11597.42Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT     VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT

Query:  PPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
        PPRTVAIAPKRDGPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
Subjt:  PPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS

Query:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
        PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Subjt:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR

SwissProt top hitse value%identityAlignment
Q15287 RNA-binding protein with serine-rich domain 12.9e-1640.38Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT
        R PSP  +   +HI  L+RNV + H+ EIF  +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I     L      P PP  
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT

Query:  VAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ
            P+R  P P           M R+  P  RR+  SPRRRSPV RR  SP RR+
Subjt:  VAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ

Q4R5N1 RNA-binding protein with serine-rich domain 12.9e-1640.38Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT
        R PSP  +   +HI  L+RNV + H+ EIF  +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I     L      P PP  
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT

Query:  VAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ
            P+R  P P           M R+  P  RR+  SPRRRSPV RR  SP RR+
Subjt:  VAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ

Q5NVM8 RNA-binding protein with serine-rich domain 12.9e-1640.38Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT
        R PSP  +   +HI  L+RNV + H+ EIF  +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I     L      P PP  
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT

Query:  VAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ
            P+R  P P           M R+  P  RR+  SPRRRSPV RR  SP RR+
Subjt:  VAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ

Q99M28 RNA-binding protein with serine-rich domain 12.9e-1640.38Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT
        R PSP  +   +HI  L+RNV + H+ EIF  +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I     L      P PP  
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT

Query:  VAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ
            P+R  P P           M R+  P  RR+  SPRRRSPV RR  SP RR+
Subjt:  VAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ

Q9SEE9 Serine/arginine-rich splicing factor SR456.6e-6970.48Show/hide
Query:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK
        V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAEKAQ+YMDGAQIDG V++  FTLP RQK+ +PP+ V+ APK
Subjt:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK

Query:  RDGPKPENVGADAEKD-DMKRQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRH
        RD PK +N  ADAEKD   +R RE SP+RK   SPRRRSP+ RRG SP RR PDSP RRRP SP RR      R D+PPRRRPASP RGRSP SP PRR+
Subjt:  RDGPKPENVGADAEKD-DMKRQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRH

Query:  RSPPRPSPRRIRGSPVRRRSPPPPRRR
        RSPPR SPRRIRGSPVRRRSP P RRR
Subjt:  RSPPRPSPRRIRGSPVRRRSPPPPRRR

Arabidopsis top hitse value%identityAlignment
AT1G16610.1 arginine/serine-rich 454.7e-7070.48Show/hide
Query:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK
        V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAEKAQ+YMDGAQIDG V++  FTLP RQK+ +PP+ V+ APK
Subjt:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK

Query:  RDGPKPENVGADAEKD-DMKRQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRH
        RD PK +N  ADAEKD   +R RE SP+RK   SPRRRSP+ RRG SP RR PDSP RRRP SP RR      R D+PPRRRPASP RGRSP SP PRR+
Subjt:  RDGPKPENVGADAEKD-DMKRQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRH

Query:  RSPPRPSPRRIRGSPVRRRSPPPPRRR
        RSPPR SPRRIRGSPVRRRSP P RRR
Subjt:  RSPPRPSPRRIRGSPVRRRSPPPPRRR

AT1G16610.2 arginine/serine-rich 454.4e-6869.33Show/hide
Query:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK
        V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAEKAQ+YMDGAQIDG V++  FTLP RQK+ +PP+ V+ APK
Subjt:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK

Query:  RDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRHRS
        RD PK +N  ADAEKD   R+    PR +  SPRRRSP+ RRG SP RR PDSP RRRP SP RR      R D+PPRRRPASP RGRSP SP PRR+RS
Subjt:  RDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRHRS

Query:  PPRPSPRRIRGSPVRRRSPPPPRRR
        PPR SPRRIRGSPVRRRSP P RRR
Subjt:  PPRPSPRRIRGSPVRRRSPPPPRRR

AT1G16610.3 arginine/serine-rich 454.7e-7070.48Show/hide
Query:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK
        V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAEKAQ+YMDGAQIDG V++  FTLP RQK+ +PP+ V+ APK
Subjt:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK

Query:  RDGPKPENVGADAEKD-DMKRQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRH
        RD PK +N  ADAEKD   +R RE SP+RK   SPRRRSP+ RRG SP RR PDSP RRRP SP RR      R D+PPRRRPASP RGRSP SP PRR+
Subjt:  RDGPKPENVGADAEKD-DMKRQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRH

Query:  RSPPRPSPRRIRGSPVRRRSPPPPRRR
        RSPPR SPRRIRGSPVRRRSP P RRR
Subjt:  RSPPRPSPRRIRGSPVRRRSPPPPRRR

AT2G29210.1 splicing factor PWI domain-containing protein2.0e-0442.25Show/hide
Query:  PQRQKMPTPPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPAS
        P+R+++ +P R+ + +P R   +P + G        +R+R PS    PP+ RRRSP      SPP R     RRR  SPP RR  SP    +PP R    
Subjt:  PQRQKMPTPPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPAS

Query:  PIRGRSPSPLPRRHRSPPRPSPRRIRGSPV-RRRSPPPPRRR
          + RSPSP  RRHRSPP    RR    P  RRRSP PP RR
Subjt:  PIRGRSPSPLPRRHRSPPRPSPRRIRGSPV-RRRSPPPPRRR

AT3G13570.1 SC35-like splicing factor 30A6.9e-0531.03Show/hide
Query:  LSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGA
        L  +  +  LR  F  FG V ++ L  D     P+G+G+++F    DA +A+  MDG  + G  + V F    R+K PT  RT      RD     N   
Subjt:  LSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGA

Query:  DAEKDDMKRQREPSPRR------------KPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPP--------------RRRVESPFRRDSPPRRRPASPIR
        D  +   +  R P PRR             PP+ R +S    R  SP  R+ +  R    SPP              +    SP R  SP + R  +P +
Subjt:  DAEKDDMKRQREPSPRR------------KPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPP--------------RRRVESPFRRDSPPRRRPASPIR

Query:  GRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSP
         RS SP+PR+ RS P P P   RG+    RSP
Subjt:  GRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGAAACCTTCTCCTGTACGCGAGTCCCTTGTTCTTCACATTGATGCACTTAGCAGGAATGTCCATGAGGGTCATTTAAGAGAAATATTCTGTAACTTTGGCGAAGTAGT
CAATGTTGAGCTGGCAATGGATCGTACAGTCAATCTTCCTAAAGGTTATGGATATGTTGAATTCAAAACGAGACCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTG
CTCAAATTGATGGAAATGTTATTAGAGTGAGATTTACATTACCTCAAAGACAGAAGATGCCGACTCCTCCAAGGACTGTGGCGATTGCTCCAAAGAGAGATGGTCCCAAG
CCTGAAAATGTTGGTGCTGATGCTGAGAAGGATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAACCTCCTTCACCTAGAAGGCGCTCACCGGTAGCTCGACG
TGGTGGGTCTCCCCCTAGAAGACAACCCGATTCTCCACGCCGCCGTCCAGAGTCTCCTCCACGCCGCCGTGTCGAATCTCCTTTCCGTCGTGATTCTCCACCTAGAAGGA
GGCCTGCATCGCCGATTAGAGGCCGTTCTCCATCCCCTTTGCCAAGGCGACATAGATCTCCTCCAAGGCCTTCTCCAAGAAGAATTCGTGGCAGTCCCGTTCGAAGACGT
TCCCCACCTCCTCCTAGGCGCCGG
mRNA sequenceShow/hide mRNA sequence
AGGAAACCTTCTCCTGTACGCGAGTCCCTTGTTCTTCACATTGATGCACTTAGCAGGAATGTCCATGAGGGTCATTTAAGAGAAATATTCTGTAACTTTGGCGAAGTAGT
CAATGTTGAGCTGGCAATGGATCGTACAGTCAATCTTCCTAAAGGTTATGGATATGTTGAATTCAAAACGAGACCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTG
CTCAAATTGATGGAAATGTTATTAGAGTGAGATTTACATTACCTCAAAGACAGAAGATGCCGACTCCTCCAAGGACTGTGGCGATTGCTCCAAAGAGAGATGGTCCCAAG
CCTGAAAATGTTGGTGCTGATGCTGAGAAGGATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAACCTCCTTCACCTAGAAGGCGCTCACCGGTAGCTCGACG
TGGTGGGTCTCCCCCTAGAAGACAACCCGATTCTCCACGCCGCCGTCCAGAGTCTCCTCCACGCCGCCGTGTCGAATCTCCTTTCCGTCGTGATTCTCCACCTAGAAGGA
GGCCTGCATCGCCGATTAGAGGCCGTTCTCCATCCCCTTTGCCAAGGCGACATAGATCTCCTCCAAGGCCTTCTCCAAGAAGAATTCGTGGCAGTCCCGTTCGAAGACGT
TCCCCACCTCCTCCTAGGCGCCGG
Protein sequenceShow/hide protein sequence
RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPK
PENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRR
SPPPPRRR