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MS004649 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004649
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein IDA-LIKE 2
Genome locationscaffold564:338827..339069
RNA-Seq ExpressionMS004649
SyntenyMS004649
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR47671.1 hypothetical protein CICLE_v10003011mg [Citrus clementina]3.8e-0849.38Show/hide
Query:  MGKRHQIQLLLRTLMVLTLLLNGHGSR-LTQFFYEKKP--HKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
        MGK+H I LL   L+++  + + H +R  TQ F  K+P  H+   SP  I GFLPK+ P+PPSGPSK+HN I L SSQ  P
Subjt:  MGKRHQIQLLLRTLMVLTLLLNGHGSR-LTQFFYEKKP--HKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
KAG2663124.1 hypothetical protein I3760_16G013000 [Carya illinoinensis]5.0e-0848.72Show/hide
Query:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
        MGK +Q+ LL   LM+  ++   HG+R +Q F + KP    S+     GFLPKA P+PPSGPSKKHN I L SS+  P
Subjt:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
KAG5246034.1 Protein IDA [Salix suchowensis]8.5e-0846.67Show/hide
Query:  RHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
        R  + L+L  L++ + + + +G+R +Q F   KP    SSPS   GFLPK +PVPPSGPSK+HNGI + SS   P
Subjt:  RHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
PNT37459.1 hypothetical protein POPTR_005G189900 [Populus trichocarpa]1.5e-0946.15Show/hide
Query:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
        MG+R  + L L  L++ +   + +G+R +Q F   KP+   SSPS   GFLPK +P+PPSGPSK+HN I L SS+  P
Subjt:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
RVW24422.1 hypothetical protein CK203_093235 [Vitis vinifera]2.0e-0953.85Show/hide
Query:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
        MGKR QI +L   L+++ L+   HGSR TQ   EK   K ++SP    GFLPK +P+PPSGPSKKHN I L SSQ  P
Subjt:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
TrEMBL top hitse value%identityAlignment
A0A438CMI4 Uncharacterized protein9.8e-1053.85Show/hide
Query:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
        MGKR QI +L   L+++ L+   HGSR TQ   EK   K ++SP    GFLPK +P+PPSGPSKKHN I L SSQ  P
Subjt:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
A0A445LL44 Uncharacterized protein1.2e-0746.67Show/hide
Query:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQ
        MG+RH   LL+   +++  +   +GSR TQ F  K   K + S    +GFLPKA+P+PPSGPSK+HN IQL +S+
Subjt:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQ
B9H7Q3 Uncharacterized protein7.5e-1046.15Show/hide
Query:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
        MG+R  + L L  L++ +   + +G+R +Q F   KP+   SSPS   GFLPK +P+PPSGPSK+HN I L SS+  P
Subjt:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
K7K742 Uncharacterized protein1.2e-0746.67Show/hide
Query:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQ
        MG+RH   LL+   +++  +   +GSR TQ F  K   K + S    +GFLPKA+P+PPSGPSK+HN IQL +S+
Subjt:  MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQ
V4TDF6 Uncharacterized protein1.8e-0849.38Show/hide
Query:  MGKRHQIQLLLRTLMVLTLLLNGHGSR-LTQFFYEKKP--HKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
        MGK+H I LL   L+++  + + H +R  TQ F  K+P  H+   SP  I GFLPK+ P+PPSGPSK+HN I L SSQ  P
Subjt:  MGKRHQIQLLLRTLMVLTLLLNGHGSR-LTQFFYEKKP--HKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHP
SwissProt top hitse value%identityAlignment
Q6DUW9 Protein IDA-LIKE 23.7e-0641.46Show/hide
Query:  IQLLLRTLMVLTLLLNG--HGSRLTQFFYEKKPHK-----LRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHPCSP
        +    RT+++L +LL G  +G+R     +  KPHK     + SS     GFLP+  PVP SGPS+KHN I L S  +H  SP
Subjt:  IQLLLRTLMVLTLLLNG--HGSRLTQFFYEKKPHK-----LRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHPCSP
Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein7.9e-0452.94Show/hide
Query:  EKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHN
        +K   +L    S I G+LPK VP+PPS PSK+HN
Subjt:  EKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHN
AT5G64667.1 inflorescence deficient in abscission (IDA)-like 22.6e-0741.46Show/hide
Query:  IQLLLRTLMVLTLLLNG--HGSRLTQFFYEKKPHK-----LRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHPCSP
        +    RT+++L +LL G  +G+R     +  KPHK     + SS     GFLP+  PVP SGPS+KHN I L S  +H  SP
Subjt:  IQLLLRTLMVLTLLLNG--HGSRLTQFFYEKKPHK-----LRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHPCSP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAAAGACATCAAATTCAGCTGCTACTAAGGACATTAATGGTGCTAACTCTGCTCCTCAATGGGCATGGCTCAAGGCTCACACAGTTCTTCTATGAGAAGAAGCC
CCACAAGCTGAGAAGCTCCCCAAGCATCATCAATGGCTTCCTCCCAAAGGCAGTCCCAGTCCCTCCCTCTGGCCCCTCCAAGAAGCACAATGGCATCCAATTAGACAGCT
CCCAATTCCATCCTTGCTCCCCA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAAAGACATCAAATTCAGCTGCTACTAAGGACATTAATGGTGCTAACTCTGCTCCTCAATGGGCATGGCTCAAGGCTCACACAGTTCTTCTATGAGAAGAAGCC
CCACAAGCTGAGAAGCTCCCCAAGCATCATCAATGGCTTCCTCCCAAAGGCAGTCCCAGTCCCTCCCTCTGGCCCCTCCAAGAAGCACAATGGCATCCAATTAGACAGCT
CCCAATTCCATCCTTGCTCCCCA
Protein sequenceShow/hide protein sequence
MGKRHQIQLLLRTLMVLTLLLNGHGSRLTQFFYEKKPHKLRSSPSIINGFLPKAVPVPPSGPSKKHNGIQLDSSQFHPCSP