CuGenDBv2

Gene ID	MS004653
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	30S ribosomal protein S14, chloroplastic
Genome location	scaffold564:423476..423640
RNA-Seq Expression	MS004653
Synteny	MS004653
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR001209 - Ribosomal protein S14 IPR018271 - Ribosomal protein S14, conserved site

Homology

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GenBank top hits

e value

%identity

Alignment

QCG75853.1 Rps14 [Verbena incisa]

1.3e-20

96.23

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCF TGR RANYRDFGLSRHILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

QJQ74048.1 ribosomal protein S14 [Schnabelia oligophylla]

1.3e-20

96.23

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCF TGR RANYRDFGLSRHILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

YP_009347703.1 30S ribosomal protein S14 [Anoectochilus emeiensis]

1.3e-20

96.23

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAP RLHRRCFLTGR RANYRDFGLSRHILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

YP_009383143.1 ribosomal protein S14 [Parkia javanica]

2.7e-21

98.11

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCFLTGR RANYRDFGLSRHILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

YP_009456059.1 ribosomal protein S14 [Momordica charantia]

3.5e-21

98.11

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLS HILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

TrEMBL top hits

e value

%identity

Alignment

A0A1Z1CF49 30S ribosomal protein S14, chloroplastic

1.3e-21

98.11

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCFLTGR RANYRDFGLSRHILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

A0A2I6C003 30S ribosomal protein S14, chloroplastic

1.7e-21

98.11

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLS HILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

A0A4P7YDP5 30S ribosomal protein S14, chloroplastic

6.4e-21

96.23

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCF TGR RANYRDFGLSRHILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

A0A5Q0UXU4 30S ribosomal protein S14, chloroplastic

1.3e-21

98.11

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCFLTGR RANYRDFGLSRHILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

A0A7U1G5H6 Ribosomal protein S14

6.4e-21

96.23

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCF TGR RANYRDFGLSRHILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

SwissProt top hits

e value

%identity

Alignment

B2XWK3 30S ribosomal protein S14, chloroplastic

6.6e-23

94.34

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCFLTGR RANYRDFGLS HILREMVH CLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

P06371 30S ribosomal protein S14, chloroplastic

2.3e-23

96.23

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCFLTGR RANYRDFGLS HILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

Q33C38 30S ribosomal protein S14, chloroplastic

2.3e-23

96.23

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCFLTGR RANYRDFGLS HILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

Q3C1I0 30S ribosomal protein S14, chloroplastic

2.3e-23

96.23

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCFLTGR RANYRDFGLS HILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

Q4VZN5 30S ribosomal protein S14, chloroplastic

2.3e-23

96.23

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCFLTGR RANYRDFGLS HILREMVHACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

Arabidopsis top hits

e value

%identity

Alignment

AT2G34520.1 mitochondrial ribosomal protein S14

7.0e-04

41.51

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KL   PRNSA  R+  RC  TGR R+    F +SR + R +     L G T+S
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

ATCG00330.1 chloroplast ribosomal protein S14

6.7e-23

92.45

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Query:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS
        KLQSPPRNSAPTRLHRRCF TGR RANYRDFGLS HILREMV ACLLPGATRS
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRS

Sequences

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CDS sequence

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AAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACAGAGAGCTAACTATCGAGACTTTGGGCTATCTAGACACAT
ACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAAGCAG

mRNA sequence

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AAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACAGAGAGCTAACTATCGAGACTTTGGGCTATCTAGACACAT
ACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAAGCAG

Protein sequence

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KLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSRHILREMVHACLLPGATRSKQ

MS004653 (gene) of Bitter gourd (TR) v1 genome