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MS004656 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004656
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description3-deoxy-8-phosphooctulonate synthase
Genome locationscaffold564:443027..443110
RNA-Seq ExpressionMS004656
SyntenyMS004656
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR013785 - Aldolase-type TIM barrel


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MCI07647.1 peroxisomal (S)-2-hydroxy-acid oxidase-like [Trifolium medium]4.4e-0482.14Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        MTNSAEK+R+  NPNVMVCER TMFGYS
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
XP_028758163.1 2-dehydro-3-deoxyphosphooctonate aldolase-like, partial [Prosopis alba]7.5e-0482.14Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        MTNSAEKIR+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
XP_028759000.1 2-dehydro-3-deoxyphosphooctonate aldolase isoform X1 [Prosopis alba]7.5e-0482.14Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        MTNSAEKIR+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
XP_028759002.1 2-dehydro-3-deoxyphosphooctonate aldolase isoform X2 [Prosopis alba]7.5e-0482.14Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        MTNSAEKIR+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
XP_031283337.1 LOW QUALITY PROTEIN: 2-dehydro-3-deoxyphosphooctonate aldolase 1 [Pistacia vera]7.5e-0482.14Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        MTNSAEKIR+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
TrEMBL top hitse value%identityAlignment
A0A392P6K6 3-deoxy-8-phosphooctulonate synthase (Fragment)2.1e-0482.14Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        MTNSAEK+R+  NPNVMVCER TMFGYS
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
A0A445FWR2 3-deoxy-8-phosphooctulonate synthase4.7e-0478.57Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        MTNSAEK+R+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
I1L645 3-deoxy-8-phosphooctulonate synthase4.7e-0478.57Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        MTNSAEK+R+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
K7LFV9 3-deoxy-8-phosphooctulonate synthase2.1e-0482.14Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        MTNSAEK+R+  NPNVMVCER TMFGYS
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
K7MUK5 3-deoxy-8-phosphooctulonate synthase4.7e-0478.57Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        MTNSAEK+R+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
SwissProt top hitse value%identityAlignment
O50044 2-dehydro-3-deoxyphosphooctonate aldolase4.9e-0675Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        M NSAEK+R+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
Q6NQL4 2-dehydro-3-deoxyphosphooctonate aldolase 26.3e-0675Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        M NSAEK+R+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
Q9AV97 2-dehydro-3-deoxyphosphooctonate aldolase 14.9e-0678.57Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        M NSAEKIR+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
Arabidopsis top hitse value%identityAlignment
AT1G79500.1 Aldolase-type TIM barrel family protein3.5e-0778.57Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        M NSAEKIR+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
AT1G79500.2 Aldolase-type TIM barrel family protein3.5e-0778.57Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        M NSAEKIR+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
AT1G79500.3 Aldolase-type TIM barrel family protein3.5e-0778.57Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        M NSAEKIR+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
AT1G79500.4 Aldolase-type TIM barrel family protein3.5e-0778.57Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        M NSAEKIR+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS
AT1G79500.5 Aldolase-type TIM barrel family protein3.5e-0778.57Show/hide
Query:  MTNSAEKIRMTRNPNVMVCERETMFGYS
        M NSAEKIR+  NPNVMVCER TMFGY+
Subjt:  MTNSAEKIRMTRNPNVMVCERETMFGYS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATTCTGCTGAAAAGATCAGAATGACTAGAAATCCGAACGTGATGGTTTGTGAGAGAGAAACTATGTTTGGATATAGT
mRNA sequenceShow/hide mRNA sequence
ATGACAAATTCTGCTGAAAAGATCAGAATGACTAGAAATCCGAACGTGATGGTTTGTGAGAGAGAAACTATGTTTGGATATAGT
Protein sequenceShow/hide protein sequence
MTNSAEKIRMTRNPNVMVCERETMFGYS