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MS004696 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004696
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAAA-ATPase
Genome locationscaffold741:122673..122989
RNA-Seq ExpressionMS004696
SyntenyMS004696
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017730.1 AAA-ATPase ASD, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-3074.26Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE
        +H EKLD AL+RRGRMDKHIE+SYC FEAFKVL+MNYLDVEWHESY  I +LL+ETEMTPADVAENLMP  E E  ++C   LV  LE+AKEEAKKK EE
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE

Query:  E
        E
Subjt:  E

XP_011002797.1 PREDICTED: probable mitochondrial chaperone BCS1-B [Populus euphratica]3.2e-3169.81Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE
        ++V+KLDPAL+RRGRMDKHIE+SYC FEAFKVLA NYL++EWHE +G I  LL ET+MTPADVAENLMP S+EE  +DCL  L+E LE+AKEEA+KK EE
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE

Query:  EGAKMA
        E    A
Subjt:  EGAKMA

XP_022157662.1 AAA-ATPase At3g28580-like [Momordica charantia]2.0e-4188.07Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKK---
        +HVEKLDPALVRRGRMDKHIE+SYCGFEAFKVLAMNYLDVEWHESYG+IRRLLEETEMTPADVAENLMP SEEEVAEDC   LVE LESAKEEAKKK   
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKK---

Query:  EEEEGAKMA
        EE E AKMA
Subjt:  EEEEGAKMA

XP_038904832.1 AAA-ATPase ASD, mitochondrial-like [Benincasa hispida]6.4e-3275.93Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKK--KE
        +H EKLD AL+RRGRMDKHIE+SYCGFEAFKVLAMNYLDVEW ESY  IR L EETEMTPADVAENLMP  E E  E+CL  LVE LES KE A+K  KE
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKK--KE

Query:  EEEGAKMA
        E E AKMA
Subjt:  EEEGAKMA

XP_038905504.1 AAA-ATPase At3g28580-like [Benincasa hispida]1.2e-3071.7Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE
        +H EKLD AL+RRGRMDKHIE+SYCGFEAFKVLAMNYLDVEW +SY  IR LLEETEMTPADVAENLMP  E E  E+C   L+E LE+AK  A+KK+ E
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE

Query:  EGAKMA
        E A+ A
Subjt:  EGAKMA

TrEMBL top hitse value%identityAlignment
A0A2K2AS23 AAA domain-containing protein2.9e-3069.81Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE
        ++V+KLDPAL+RRGRMDKHIE+SYC FEAFKVLA NYL++E HE +G I  LL ET+MTPADVAENLMP S+EE  EDCL  L+E LE+AKEEA+KK EE
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE

Query:  EGAKMA
        E    A
Subjt:  EGAKMA

A0A6A6M817 Uncharacterized protein1.0e-3072.64Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAK-EEAKKKEE
        ++VEKLDPAL+RRGRMDKHIE+SYC FEAFKVLA NYLD+E HE +G I+ LLEET+MTPADVAENLMP SEEE  E CL  L+  LE AK EEA+KK E
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAK-EEAKKKEE

Query:  EEGAKM
        EE AK+
Subjt:  EEGAKM

A0A6J1DV28 AAA-ATPase At3g28580-like9.6e-4288.07Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKK---
        +HVEKLDPALVRRGRMDKHIE+SYCGFEAFKVLAMNYLDVEWHESYG+IRRLLEETEMTPADVAENLMP SEEEVAEDC   LVE LESAKEEAKKK   
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKK---

Query:  EEEEGAKMA
        EE E AKMA
Subjt:  EEEEGAKMA

A0A6J1F7K3 AAA-ATPase At3g28580-like3.8e-3073.27Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE
        +H EKLD AL+RRGRMDKHIE+SYC F AFKVL+MNYLDVEWHESY  I +LL+ETEMTPADVAENLMP  E E  ++C   LV  LE+AKEEAKKK EE
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE

Query:  E
        E
Subjt:  E

A0A6J1J8M3 AAA-ATPase ASD, mitochondrial-like1.0e-3068.75Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKK---
        +H EKLD AL+RRGRMDKHIE+ +CGFEAFKVL+ NYLDVEWH+SY  IR+LLEE EM+PADVAENLMP  E E  +DC   LVE LE AKEEA+KK   
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKK---

Query:  ---EEEEGAKMA
           EE E AKMA
Subjt:  ---EEEEGAKMA

SwissProt top hitse value%identityAlignment
Q9FLD5 AAA-ATPase ASD, mitochondrial3.0e-2459.81Show/hide
Query:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDV---EWHESYGDIRRLL--EETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKK
        ++KLDPAL+R+GRMDKHIE+SYCGFEAFKVLA NYLD    + +E + +I+RLL  EE +MTPADV ENL+  SE E  E CL  L+E L+  KEEAK++
Subjt:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDV---EWHESYGDIRRLL--EETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKK

Query:  EEEEGAK
         E+E  K
Subjt:  EEEEGAK

Q9LH82 AAA-ATPase At3g285402.1e-3064.15Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE
        ++++KLDPAL+RRGRMD HIE+SYC FEAFKVLA NYL++E H+ +G+I+RL+EET+M+PADVAENLMP S+E+ A+ CL  LV++LE  KE+AKK  EE
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE

Query:  EGAKMA
        E  K A
Subjt:  EGAKMA

Q9LH83 AAA-ATPase At3g285201.2e-2563.73Show/hide
Query:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEEEG
        V+ LDPAL+RRGRMD HIE+SYC FEAFKVLA NYL+ E H+ YG+I RLLEE +++PADVAENLMP S+E+ A+ C   LV++LE   EE KKK E+E 
Subjt:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEEEG

Query:  AK
         K
Subjt:  AK

Q9LH84 AAA-ATPase At3g285106.2e-3066.35Show/hide
Query:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEEEG
        V+KLDPAL+RRGRMD HIE+SYC FEAFKVLA NYL++E H+ YG+I R LEET+M+PADVAE LMP S+EE A+ C+  LV+TLE  KE+A+K  EEE 
Subjt:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEEEG

Query:  AKMA
         K A
Subjt:  AKMA

Q9LJJ7 AAA-ATPase At3g285803.4e-2868.32Show/hide
Query:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLL--EETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE
        V+KLDPAL+R+GRMDKHIE+SYC FEAFKVLA NYLDVE  E + +I+RLL  EE +MTPADV ENL+P SE+E  E CL  L+E L+  KEEAKKK EE
Subjt:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLL--EETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE

Query:  E
        E
Subjt:  E

Arabidopsis top hitse value%identityAlignment
AT3G28510.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.4e-3166.35Show/hide
Query:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEEEG
        V+KLDPAL+RRGRMD HIE+SYC FEAFKVLA NYL++E H+ YG+I R LEET+M+PADVAE LMP S+EE A+ C+  LV+TLE  KE+A+K  EEE 
Subjt:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEEEG

Query:  AKMA
         K A
Subjt:  AKMA

AT3G28520.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein8.6e-2763.73Show/hide
Query:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEEEG
        V+ LDPAL+RRGRMD HIE+SYC FEAFKVLA NYL+ E H+ YG+I RLLEE +++PADVAENLMP S+E+ A+ C   LV++LE   EE KKK E+E 
Subjt:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEEEG

Query:  AK
         K
Subjt:  AK

AT3G28540.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.5e-3164.15Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE
        ++++KLDPAL+RRGRMD HIE+SYC FEAFKVLA NYL++E H+ +G+I+RL+EET+M+PADVAENLMP S+E+ A+ CL  LV++LE  KE+AKK  EE
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE

Query:  EGAKMA
        E  K A
Subjt:  EGAKMA

AT3G28540.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.5e-3164.15Show/hide
Query:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE
        ++++KLDPAL+RRGRMD HIE+SYC FEAFKVLA NYL++E H+ +G+I+RL+EET+M+PADVAENLMP S+E+ A+ CL  LV++LE  KE+AKK  EE
Subjt:  DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE

Query:  EGAKMA
        E  K A
Subjt:  EGAKMA

AT3G28580.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.4e-2968.32Show/hide
Query:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLL--EETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE
        V+KLDPAL+R+GRMDKHIE+SYC FEAFKVLA NYLDVE  E + +I+RLL  EE +MTPADV ENL+P SE+E  E CL  L+E L+  KEEAKKK EE
Subjt:  VEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLL--EETEMTPADVAENLMPTSEEEVAEDCL-GLVETLESAKEEAKKKEEE

Query:  E
        E
Subjt:  E


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATCATGTGGAGAAGCTTGATCCGGCGCTGGTGAGGAGAGGGAGGATGGACAAGCATATTGAGATTTCTTATTGTGGGTTCGAGGCTTTTAAGGTTCTTGCCATGAATTA
TTTGGATGTGGAGTGGCATGAGTCGTACGGGGACATCCGGCGGTTGTTGGAGGAGACGGAGATGACTCCGGCCGACGTCGCGGAGAATTTGATGCCCACGTCGGAGGAGG
AAGTGGCGGAGGATTGTCTCGGGTTAGTTGAAACTTTGGAGAGTGCGAAAGAGGAAGCCAAGAAGAAGGAAGAAGAAGAAGGTGCAAAAATGGCT
mRNA sequenceShow/hide mRNA sequence
GATCATGTGGAGAAGCTTGATCCGGCGCTGGTGAGGAGAGGGAGGATGGACAAGCATATTGAGATTTCTTATTGTGGGTTCGAGGCTTTTAAGGTTCTTGCCATGAATTA
TTTGGATGTGGAGTGGCATGAGTCGTACGGGGACATCCGGCGGTTGTTGGAGGAGACGGAGATGACTCCGGCCGACGTCGCGGAGAATTTGATGCCCACGTCGGAGGAGG
AAGTGGCGGAGGATTGTCTCGGGTTAGTTGAAACTTTGGAGAGTGCGAAAGAGGAAGCCAAGAAGAAGGAAGAAGAAGAAGGTGCAAAAATGGCT
Protein sequenceShow/hide protein sequence
DHVEKLDPALVRRGRMDKHIEISYCGFEAFKVLAMNYLDVEWHESYGDIRRLLEETEMTPADVAENLMPTSEEEVAEDCLGLVETLESAKEEAKKKEEEEGAKMA