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MS004698 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004698
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold741:152359..152628
RNA-Seq ExpressionMS004698
SyntenyMS004698
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6736244.1 hypothetical protein POTOM_061027 [Populus tomentosa]5.0e-1745.12Show/hide
Query:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYN
        RL  +WK +G+  L+ L NDFF+AR   KEDR+  +  GPW + D+YL +R W P F P+  TI++ A+W+ +PD  ME Y+
Subjt:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYN

QHO10922.1 uncharacterized protein DS421_15g493820 [Arachis hypogaea]2.2e-1747.19Show/hide
Query:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI
        RL  +W   G   +I L NDFF+ +    ED D  LM+GPWKILD+YL IR W P+F P T TID  A W+ +P   +E YN T + +I
Subjt:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI

QHO29058.1 uncharacterized protein DS421_7g222010 [Arachis hypogaea]5.9e-1844.94Show/hide
Query:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI
        RL A+W   G   +I L NDFF+ +     D D  LM+GPWK+LD+YL IR W P F P+T  ID+ A+W+ +PD P+E Y+   + +I
Subjt:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI

XP_015954644.1 uncharacterized protein LOC107479006 [Arachis duranensis]2.2e-1747.19Show/hide
Query:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI
        RL  +W   G   +I L NDFF+ +    ED D  LM+GPWKILD+YL IR W P+F P T TID  A W+ +P   +E YN T + +I
Subjt:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI

XP_016206221.1 uncharacterized protein LOC107646555 [Arachis ipaensis]4.5e-1846.07Show/hide
Query:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI
        RL ++W  KG   +I LSNDF++ +    ED D  L++GPWKI D+YL +R W P F P   TIDR   WV +P  P+ELY+ T + +I
Subjt:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI

TrEMBL top hitse value%identityAlignment
A0A101LV11 DUF4283 domain-containing protein3.1e-1745.78Show/hide
Query:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNE
        R+  +WK++GE+++I L  D F+ + +  EDR+RVL +GPW I D+YL +R WSP+FRPS  TI +  +WV +P+ P+E ++E
Subjt:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNE

A0A2I0KPA3 DUF4283 domain-containing protein7.0e-1748.19Show/hide
Query:  LMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNET
        L+ +W  KG+F LI LSND+FI +   +EDRD  L DGPW +  +++ +R W P F+P+   IDR A+WV IP+ P+E  NET
Subjt:  LMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNET

A0A6P4CMU1 uncharacterized protein LOC1074786557.0e-1742.7Show/hide
Query:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI
        R+  +W   GE  +I L ND+++ +   +ED D  L+DGPWKI D+YL +R W P F P T TID+   W+ +P  P+ELYN   + +I
Subjt:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI

A0A6P4CNW1 uncharacterized protein LOC1074790061.1e-1747.19Show/hide
Query:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI
        RL  +W   G   +I L NDFF+ +    ED D  LM+GPWKILD+YL IR W P+F P T TID  A W+ +P   +E YN T + +I
Subjt:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI

A0A6P4DS76 uncharacterized protein LOC1074964232.4e-1745.88Show/hide
Query:  IWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI
        +W  KG   +I LSNDF++ +    ED D  L++GPWKI D+YL +R W P F P   TIDR   WV +P  P+ELY+ T + +I
Subjt:  IWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01050.1 zinc ion binding;nucleic acid binding2.3e-1232.22Show/hide
Query:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEIS
        +L  +WK  G   ++ L   FF+ R EL+E+    L  GPW++L  YL+++ WS +F P    I    +WV + + P   Y+   + EI+
Subjt:  RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGTTAATGGCAATTTGGAAATCAAAAGGGGAATTCAAGTTGATCAGTCTCAGCAATGATTTCTTTATTGCGCGCCTGGAATTGAAAGAGGATCGAGACAGAGTCCTTAT
GGACGGCCCTTGGAAGATTTTAGACTACTATCTAGTGATTCGTGGTTGGTCTCCCAAATTCAGGCCATCAACAGTGACTATTGACAGGGCTGCTTTGTGGGTTTGCATCC
CTGATTGCCCGATGGAACTTTATAATGAGACAGAGATGAATGAAATCAGT
mRNA sequenceShow/hide mRNA sequence
AGGTTAATGGCAATTTGGAAATCAAAAGGGGAATTCAAGTTGATCAGTCTCAGCAATGATTTCTTTATTGCGCGCCTGGAATTGAAAGAGGATCGAGACAGAGTCCTTAT
GGACGGCCCTTGGAAGATTTTAGACTACTATCTAGTGATTCGTGGTTGGTCTCCCAAATTCAGGCCATCAACAGTGACTATTGACAGGGCTGCTTTGTGGGTTTGCATCC
CTGATTGCCCGATGGAACTTTATAATGAGACAGAGATGAATGAAATCAGT
Protein sequenceShow/hide protein sequence
RLMAIWKSKGEFKLISLSNDFFIARLELKEDRDRVLMDGPWKILDYYLVIRGWSPKFRPSTVTIDRAALWVCIPDCPMELYNETEMNEIS