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MS004701 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004701
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein Ycf2-like
Genome locationscaffold741:172900..173473
RNA-Seq ExpressionMS004701
SyntenyMS004701
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR015410 - Domain of unknown function DUF1985


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040869.1 protein Ycf2-like [Cucumis melo var. makuwa]6.8e-4046.01Show/hide
Query:  LCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD
        +CKP+  S+L F I G++L+FG+ +FAL+TGL C  +  I   D+   G ++ +YFE  K+V R++LN+ F ++    +DD +KM  LY+LESFL+P ++
Subjt:  LCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD

Query:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEV
         ++V+ DHI+MVDD+E+F+ YPWGRV+F+LL+++M +A  S+G  G+ MGGFI  ++ WAYE+
Subjt:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEV

KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]2.0e-5249.48Show/hide
Query:  RFRQTCFGHLLDFSISKTSSQLLFHLIQCLCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAF
        RFR+  FGH L+ SI+  SSQLL HLIQ +CKP+  S+L F I G++L+FG+ +FAL+TGL C  +P I   D++  G ++ +YFE  K+V R++LN+ F
Subjt:  RFRQTCFGHLLDFSISKTSSQLLFHLIQCLCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAF

Query:  KVNKNAPEDDMVKMTLLYYLESFLLPHKDSVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP
         ++    +DD +KM  LY+LESFL+P ++   V+ DHI+MVDD+E+F+ YPWGRV+F+LL+++M +   S+G  G+ MGGFI  ++ WAYEVIP
Subjt:  KVNKNAPEDDMVKMTLLYYLESFLLPHKDSVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP

KAA0051382.1 protein Ycf2-like [Cucumis melo var. makuwa]6.8e-4045.45Show/hide
Query:  LCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD
        +CKP+  S+L F I G++L+FG+ +FAL+TGL C  +P I   D+   G ++ +YFE  K+V+R++LN+ F ++    +DD +KM  LY+LESFL+P ++
Subjt:  LCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD

Query:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP
         + V+ DHI+MVDD+E+F+ YPWGRV+F+LL+++M +   S+G  G+ + GFI  ++ WAYEV P
Subjt:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]8.0e-4147.59Show/hide
Query:  LCKPRKASELNFYIG-KILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD
        +CKP+  S+L F IG ++L+FG+ +FAL+TGL C  +P I   D+   G ++ +YFE  K+V R++LN+ F ++    +DD +KM  LY+LESFL+P ++
Subjt:  LCKPRKASELNFYIG-KILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD

Query:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGM-GGFISALIVWAYEVIP
         + V+ DHI+MVDD+E+F+ YPWGRV+F+LL+++M +A  S+G  G+ M GGFI  ++ WAYEVIP
Subjt:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGM-GGFISALIVWAYEVIP

TYK23840.1 protein Ycf2-like [Cucumis melo var. makuwa]6.8e-4045.45Show/hide
Query:  LCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD
        +CKP+  S+L F I G++L+FG+ +FAL+TGL C  +P I   D+   G ++ +YFE  K+V+R++LN+ F ++    +DD +KM  LY+LESFL+P ++
Subjt:  LCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD

Query:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP
         + V+ DHI+MVDD+E+F+ YPWGRV+F+LL+++M +   S+G  G+ + GFI  ++ WAYEV P
Subjt:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP

TrEMBL top hitse value%identityAlignment
A0A5A7THT9 Protein Ycf2-like3.3e-4046.01Show/hide
Query:  LCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD
        +CKP+  S+L F I G++L+FG+ +FAL+TGL C  +  I   D+   G ++ +YFE  K+V R++LN+ F ++    +DD +KM  LY+LESFL+P ++
Subjt:  LCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD

Query:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEV
         ++V+ DHI+MVDD+E+F+ YPWGRV+F+LL+++M +A  S+G  G+ MGGFI  ++ WAYE+
Subjt:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEV

A0A5A7U047 Protein Ycf2-like9.8e-5349.48Show/hide
Query:  RFRQTCFGHLLDFSISKTSSQLLFHLIQCLCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAF
        RFR+  FGH L+ SI+  SSQLL HLIQ +CKP+  S+L F I G++L+FG+ +FAL+TGL C  +P I   D++  G ++ +YFE  K+V R++LN+ F
Subjt:  RFRQTCFGHLLDFSISKTSSQLLFHLIQCLCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAF

Query:  KVNKNAPEDDMVKMTLLYYLESFLLPHKDSVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP
         ++    +DD +KM  LY+LESFL+P ++   V+ DHI+MVDD+E+F+ YPWGRV+F+LL+++M +   S+G  G+ MGGFI  ++ WAYEVIP
Subjt:  KVNKNAPEDDMVKMTLLYYLESFLLPHKDSVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP

A0A5A7U6E1 Protein Ycf2-like3.3e-4045.45Show/hide
Query:  LCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD
        +CKP+  S+L F I G++L+FG+ +FAL+TGL C  +P I   D+   G ++ +YFE  K+V+R++LN+ F ++    +DD +KM  LY+LESFL+P ++
Subjt:  LCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD

Query:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP
         + V+ DHI+MVDD+E+F+ YPWGRV+F+LL+++M +   S+G  G+ + GFI  ++ WAYEV P
Subjt:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP

A0A5D3CEX9 Protein Ycf2-like3.9e-4147.59Show/hide
Query:  LCKPRKASELNFYIG-KILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD
        +CKP+  S+L F IG ++L+FG+ +FAL+TGL C  +P I   D+   G ++ +YFE  K+V R++LN+ F ++    +DD +KM  LY+LESFL+P ++
Subjt:  LCKPRKASELNFYIG-KILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD

Query:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGM-GGFISALIVWAYEVIP
         + V+ DHI+MVDD+E+F+ YPWGRV+F+LL+++M +A  S+G  G+ M GGFI  ++ WAYEVIP
Subjt:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGM-GGFISALIVWAYEVIP

A0A5D3DKA6 Protein Ycf2-like3.3e-4045.45Show/hide
Query:  LCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD
        +CKP+  S+L F I G++L+FG+ +FAL+TGL C  +P I   D+   G ++ +YFE  K+V+R++LN+ F ++    +DD +KM  LY+LESFL+P ++
Subjt:  LCKPRKASELNFYI-GKILKFGITKFALVTGLNCCPLPQI---DMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKD

Query:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP
         + V+ DHI+MVDD+E+F+ YPWGRV+F+LL+++M +   S+G  G+ + GFI  ++ WAYEV P
Subjt:  SVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31150.1 Domain of unknown function (DUF1985)8.6e-0925.84Show/hide
Query:  RFRQTCFGHLLDFSISKT--SSQLLFHLIQCLCKPRKASELNF-YIGKILKFGITKFALVTGLNCCPLPQIDMDREGHIRNIYFE------GEKSVIRKH
        R + + FG L +F +++   S +L+  L+      +K  EL F + G  ++F I +F +VTGL C  LP  D + + H  + Y        GEK ++   
Subjt:  RFRQTCFGHLLDFSISKT--SSQLLFHLIQCLCKPRKASELNF-YIGKILKFGITKFALVTGLNCCPLPQIDMDREGHIRNIYFE------GEKSVIRKH

Query:  LNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKDSVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIG----------VGMGGFISAL
          L     K       + + L+  ++  ++ +  S  V +D + M++D + F  YPWGR +F   I       D+   +G              GF  AL
Subjt:  LNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKDSVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIG----------VGMGGFISAL

Query:  IVWAYEVIP
         +  +E IP
Subjt:  IVWAYEVIP

AT2G07240.1 cysteine-type peptidases;cysteine-type peptidases7.5e-0528.57Show/hide
Query:  VKMTLLYYLESFLLPHKDSVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKAS-DSRGLIGVGMGGFISALIVWAYEVIP
        ++   L  ++ FLLP      +  DH  M +D + F +YPWGR+SF++++  +K+   +      V + G + AL +   E +P
Subjt:  VKMTLLYYLESFLLPHKDSVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKAS-DSRGLIGVGMGGFISALIVWAYEVIP

AT4G08430.1 Ulp1 protease family protein4.7e-0728.39Show/hide
Query:  LKFGITKFALVTGLNCCPLPQIDMDREGHIRNIYFEGEKSV------IRKHLNLAFKVNK--NAPEDDMVKMTLLYYLESFLLPHKDSVDVEMDHILMVD
        ++F + +F  +TGLNC      D    G      F  E  V      +   L   F+++K  +  +  MV    L Y+    + H     V +     V 
Subjt:  LKFGITKFALVTGLNCCPLPQIDMDREGHIRNIYFEGEKSV------IRKHLNLAFKVNK--NAPEDDMVKMTLLYYLESFLLPHKDSVDVEMDHILMVD

Query:  DEEIFNNYPWGRVSFDLL---IEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP
        D   F  YPWGRV+FD L   ++++K   DS       + G + AL+VW YE +P
Subjt:  DEEIFNNYPWGRVSFDLL---IEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP

AT5G28810.1 Domain of unknown function (DUF1985)2.9e-0439.62Show/hide
Query:  DEEIFNNYPWGRVSFDLLIEYMKKAS-DSRGLIGVGMGGFISALIVWAYEVIP
        D   F  YPWGRV+FD L+  +K    D    +   + G + AL+VW YE +P
Subjt:  DEEIFNNYPWGRVSFDLLIEYMKKAS-DSRGLIGVGMGGFISALIVWAYEVIP

AT5G45570.1 Ulp1 protease family protein5.2e-0625.83Show/hide
Query:  LKFGITKFALVTGLNCCPLPQIDMDREGHIRNIYFEGEKSV----IRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKDSVDVEMDHILMVDDEEI
        ++F + +F  +TGLNC    + D   E   ++ + E   S+    +   L   F+++K    +  + +  L  L   +        V +     V D   
Subjt:  LKFGITKFALVTGLNCCPLPQIDMDREGHIRNIYFEGEKSV----IRKHLNLAFKVNKNAPEDDMVKMTLLYYLESFLLPHKDSVDVEMDHILMVDDEEI

Query:  FNNYPWGRVSFDLL---IEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP
        F  YPWGRV+FD L   ++ +K   DS       + G +  L+VW YE +P
Subjt:  FNNYPWGRVSFDLL---IEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGTTTAGGCAAACCTGTTTTGGCCATCTATTAGACTTCTCAATTAGCAAAACCTCATCTCAACTTCTCTTTCACCTAATCCAGTGCCTTTGTAAACCAAGAAAGGCATC
AGAATTAAACTTTTATATTGGGAAGATATTAAAGTTTGGAATCACGAAATTTGCCCTAGTGACTGGGTTGAACTGTTGTCCATTACCCCAAATAGACATGGATAGGGAAG
GACACATAAGGAACATTTATTTTGAAGGGGAGAAGTCCGTGATAAGGAAACACTTAAACCTTGCTTTCAAGGTTAACAAAAATGCACCTGAAGATGATATGGTGAAGATG
ACCTTGCTTTATTATTTAGAGAGTTTTCTTTTGCCACACAAGGACTCCGTGGATGTAGAGATGGACCATATCCTAATGGTAGATGATGAGGAAATATTCAATAACTACCC
ATGGGGGAGGGTATCATTTGACCTTCTTATTGAATACATGAAAAAGGCGTCAGATAGCCGAGGGCTAATAGGCGTAGGGATGGGTGGATTCATATCTGCACTGATAGTGT
GGGCGTATGAGGTCATACCT
mRNA sequenceShow/hide mRNA sequence
AGGTTTAGGCAAACCTGTTTTGGCCATCTATTAGACTTCTCAATTAGCAAAACCTCATCTCAACTTCTCTTTCACCTAATCCAGTGCCTTTGTAAACCAAGAAAGGCATC
AGAATTAAACTTTTATATTGGGAAGATATTAAAGTTTGGAATCACGAAATTTGCCCTAGTGACTGGGTTGAACTGTTGTCCATTACCCCAAATAGACATGGATAGGGAAG
GACACATAAGGAACATTTATTTTGAAGGGGAGAAGTCCGTGATAAGGAAACACTTAAACCTTGCTTTCAAGGTTAACAAAAATGCACCTGAAGATGATATGGTGAAGATG
ACCTTGCTTTATTATTTAGAGAGTTTTCTTTTGCCACACAAGGACTCCGTGGATGTAGAGATGGACCATATCCTAATGGTAGATGATGAGGAAATATTCAATAACTACCC
ATGGGGGAGGGTATCATTTGACCTTCTTATTGAATACATGAAAAAGGCGTCAGATAGCCGAGGGCTAATAGGCGTAGGGATGGGTGGATTCATATCTGCACTGATAGTGT
GGGCGTATGAGGTCATACCT
Protein sequenceShow/hide protein sequence
RFRQTCFGHLLDFSISKTSSQLLFHLIQCLCKPRKASELNFYIGKILKFGITKFALVTGLNCCPLPQIDMDREGHIRNIYFEGEKSVIRKHLNLAFKVNKNAPEDDMVKM
TLLYYLESFLLPHKDSVDVEMDHILMVDDEEIFNNYPWGRVSFDLLIEYMKKASDSRGLIGVGMGGFISALIVWAYEVIP