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MS004704 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004704
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor MYB35
Genome locationscaffold741:248413..249436
RNA-Seq ExpressionMS004704
SyntenyMS004704
Gene Ontology termsGO:0048658 - anther wall tapetum development (biological process)
GO:0052545 - callose localization (biological process)
GO:0055046 - microgametogenesis (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580990.1 Transcription factor MYB35, partial [Cucurbita argyrosperma subsp. sororia]6.4e-6599.15Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DNDVKNYWNTKLRKKLSK
Subjt:  DNDVKNYWNTKLRKKLSK

XP_008443447.1 PREDICTED: transcription factor MYB35 [Cucumis melo]3.2e-6498.31Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DNDVKNYWNTKLRKKL K
Subjt:  DNDVKNYWNTKLRKKLSK

XP_022157667.1 transcription factor MYB35 [Momordica charantia]2.9e-65100Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DNDVKNYWNTKLRKKLSK
Subjt:  DNDVKNYWNTKLRKKLSK

XP_022934424.1 transcription factor MYB35-like [Cucurbita moschata]6.4e-6599.15Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DNDVKNYWNTKLRKKLSK
Subjt:  DNDVKNYWNTKLRKKLSK

XP_023526254.1 transcription factor MYB35-like [Cucurbita pepo subsp. pepo]6.4e-6599.15Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DNDVKNYWNTKLRKKLSK
Subjt:  DNDVKNYWNTKLRKKLSK

TrEMBL top hitse value%identityAlignment
A0A1S3B843 transcription factor MYB351.5e-6498.31Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DNDVKNYWNTKLRKKL K
Subjt:  DNDVKNYWNTKLRKKLSK

A0A5A7UJQ3 Transcription factor MYB351.5e-6498.31Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DNDVKNYWNTKLRKKL K
Subjt:  DNDVKNYWNTKLRKKLSK

A0A6J1DV32 transcription factor MYB351.4e-65100Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DNDVKNYWNTKLRKKLSK
Subjt:  DNDVKNYWNTKLRKKLSK

A0A6J1F2J0 transcription factor MYB35-like3.1e-6599.15Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DNDVKNYWNTKLRKKLSK
Subjt:  DNDVKNYWNTKLRKKLSK

A0A6J1J901 transcription factor MYB35-like3.1e-6599.15Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWS+IAKQLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DNDVKNYWNTKLRKKLSK
Subjt:  DNDVKNYWNTKLRKKLSK

SwissProt top hitse value%identityAlignment
Q7XQN1 Transcription factor MYB801.8e-4970.94Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MG+ PCC+K NVKRG WT EED K+L+Y++ +G  NW L+PK AGL RCGKSCRLRWTNYLRPDL+H  FT  EE  IIKLH  +G+RWS+IA QLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLS
        DNDVKN+WNTKL+KKLS
Subjt:  DNDVKNYWNTKLRKKLS

Q9LE63 Transcription factor MYB1061.7e-4463.56Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MG+ PCCDK+ +K+G WT EED K+LAY+  HG G+W  +P+KAGL RCGKSCRLRWTNYLRPD++   FT QEE  II+LH  +G+RWS IA  LP RT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DN++KNYWNT L+K+L K
Subjt:  DNDVKNYWNTKLRKKLSK

Q9LSI7 Transcription factor MYB353.6e-5883.05Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MG+PPCCDKSNVK+GLWT EEDAKILAYV+ HGVGNW+L+PKKAGLNRCGKSCRLRWTNYLRPDL+HDSF+ QEE+LII+ H+AIGSRWS IA++LPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DNDVKN+WNTKL+KKL K
Subjt:  DNDVKNYWNTKLRKKLSK

Q9M2Y9 Transcription factor RAX31.0e-4464.1Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGV-GNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGR
        MG+ PCCDK+NVK+G W+ EEDAK+ +Y+ N G  GNW  +P+K GL RCGKSCRLRW NYLRP+++H  F+ +EE++I  L+  IGSRWS+IA QLPGR
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGV-GNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGR

Query:  TDNDVKNYWNTKLRKKL
        TDND+KNYWNT+L+KKL
Subjt:  TDNDVKNYWNTKLRKKL

Q9XHV0 Transcription factor MYB801.8e-4970.09Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MG+ PCC+K NVKRG WT EED K+ +Y++ HG  NW L+PK AGL RCGKSCRLRWTNYLRPDL+H  F+  EE +I+K H  +G+RWSLIA QLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLS
        DNDVKNYWNTKL+KKLS
Subjt:  DNDVKNYWNTKLRKKLS

Arabidopsis top hitse value%identityAlignment
AT3G02940.1 myb domain protein 1073.5e-4562.07Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MG+ PCCD+S +K+G WT EED K++ ++  HG G+W  +PK+AGLNRCGKSCRLRWTNYLRPD++  +FT +EE  II LH  +G++WS IA  LPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKL
        DN++KNYWNT +RKKL
Subjt:  DNDVKNYWNTKLRKKL

AT3G28470.1 Duplicated homeodomain-like superfamily protein2.5e-5983.05Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MG+PPCCDKSNVK+GLWT EEDAKILAYV+ HGVGNW+L+PKKAGLNRCGKSCRLRWTNYLRPDL+HDSF+ QEE+LII+ H+AIGSRWS IA++LPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLSK
        DNDVKN+WNTKL+KKL K
Subjt:  DNDVKNYWNTKLRKKLSK

AT3G49690.1 myb domain protein 847.1e-4664.1Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGV-GNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGR
        MG+ PCCDK+NVK+G W+ EEDAK+ +Y+ N G  GNW  +P+K GL RCGKSCRLRW NYLRP+++H  F+ +EE++I  L+  IGSRWS+IA QLPGR
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGV-GNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGR

Query:  TDNDVKNYWNTKLRKKL
        TDND+KNYWNT+L+KKL
Subjt:  TDNDVKNYWNTKLRKKL

AT4G28110.1 myb domain protein 413.5e-4562.07Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MG+ PCCDK+ VK+G WTAEED K++ Y+  HG GNW  +PK AGL+RCGKSCRLRWTNYLRPD++   F+ +EE+ II+LH  +G++WS IA +LPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKL
        DN++KN+WNT +RK+L
Subjt:  DNDVKNYWNTKLRKKL

AT5G56110.1 myb domain protein 1031.3e-5070.09Show/hide
Query:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT
        MG+ PCC+K NVKRG WT EED K+ +Y++ HG  NW L+PK AGL RCGKSCRLRWTNYLRPDL+H  F+  EE +I+K H  +G+RWSLIA QLPGRT
Subjt:  MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRT

Query:  DNDVKNYWNTKLRKKLS
        DNDVKNYWNTKL+KKLS
Subjt:  DNDVKNYWNTKLRKKLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAACCTCCTTGCTGTGATAAATCCAATGTCAAAAGAGGCCTTTGGACTGCAGAAGAAGATGCCAAAATCCTTGCTTATGTTTCCAACCATGGAGTTGGAAATTG
GACTCTGGTTCCTAAAAAAGCAGGGCTGAATAGATGTGGGAAGAGTTGCAGGCTGAGATGGACTAATTACCTTAGGCCTGATCTCAGGCATGACAGCTTCACTCCTCAAG
AAGAAGACCTCATTATCAAACTCCATCAAGCCATTGGAAGCAGGTGGTCTCTGATAGCAAAGCAACTCCCAGGAAGAACAGACAATGATGTGAAGAATTACTGGAACACA
AAGCTGAGGAAGAAGCTCTCGAAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAACCTCCTTGCTGTGATAAATCCAATGTCAAAAGAGGCCTTTGGACTGCAGAAGAAGATGCCAAAATCCTTGCTTATGTTTCCAACCATGGAGTTGGAAATTG
GACTCTGGTTCCTAAAAAAGCAGGGCTGAATAGATGTGGGAAGAGTTGCAGGCTGAGATGGACTAATTACCTTAGGCCTGATCTCAGGCATGACAGCTTCACTCCTCAAG
AAGAAGACCTCATTATCAAACTCCATCAAGCCATTGGAAGCAGGTGGTCTCTGATAGCAAAGCAACTCCCAGGAAGAACAGACAATGATGTGAAGAATTACTGGAACACA
AAGCTGAGGAAGAAGCTCTCGAAA
Protein sequenceShow/hide protein sequence
MGKPPCCDKSNVKRGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLRHDSFTPQEEDLIIKLHQAIGSRWSLIAKQLPGRTDNDVKNYWNT
KLRKKLSK