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MS004708 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004708
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMuDRA-like transposase
Genome locationscaffold741:265230..265397
RNA-Seq ExpressionMS004708
SyntenyMS004708
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]1.4e-0966.67Show/hide
Query:  GQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL
        GQWNEA +VYEGG++ GL+VD+ ITY +L+SAIFR+TR +P+ FNIVL
Subjt:  GQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL

XP_022156802.1 uncharacterized protein LOC111023635 [Momordica charantia]6.9e-0956.36Show/hide
Query:  RLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL
        RLF  Y G+WNEA +VYEGG + GLDVD+ ITY  L+SA+  LTR D +QF++++
Subjt:  RLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL

XP_022156834.1 uncharacterized protein LOC111023667 [Momordica charantia]3.7e-1056.36Show/hide
Query:  RLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL
        RLF  Y G+WNEA ++YEGG++ GLDVD+ ITY  L+SA+  LTR DP+QF++++
Subjt:  RLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL

XP_031257222.1 uncharacterized protein LOC116115200 isoform X1 [Pistacia vera]3.0e-0437.93Show/hide
Query:  RLFFSYNGQWNEAQS---VYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL
        R+   YNG+W  + S   VY GG ++G+ + D ITY EL+  +++L + DPN++ I++
Subjt:  RLFFSYNGQWNEAQS---VYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL

XP_031257229.1 uncharacterized protein LOC116115200 isoform X2 [Pistacia vera]3.0e-0437.93Show/hide
Query:  RLFFSYNGQWNEAQS---VYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL
        R+   YNG+W  + S   VY GG ++G+ + D ITY EL+  +++L + DPN++ I++
Subjt:  RLFFSYNGQWNEAQS---VYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL

TrEMBL top hitse value%identityAlignment
A0A6J1DLB0 uncharacterized protein LOC1110219696.7e-1066.67Show/hide
Query:  GQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL
        GQWNEA +VYEGG++ GL+VD+ ITY +L+SAIFR+TR +P+ FNIVL
Subjt:  GQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL

A0A6J1DPC2 uncharacterized protein LOC111022579 isoform X22.5e-0440Show/hide
Query:  RLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQ
        R+F  Y G WN+ Q+ Y+GG+++G+ V   ITY +L+  ++ LT  DP +
Subjt:  RLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQ

A0A6J1DRN0 uncharacterized protein LOC111022579 isoform X12.5e-0440Show/hide
Query:  RLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQ
        R+F  Y G WN+ Q+ Y+GG+++G+ V   ITY +L+  ++ LT  DP +
Subjt:  RLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQ

A0A6J1DSY0 uncharacterized protein LOC1110236353.3e-0956.36Show/hide
Query:  RLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL
        RLF  Y G+WNEA +VYEGG + GLDVD+ ITY  L+SA+  LTR D +QF++++
Subjt:  RLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL

A0A6J1DUS4 uncharacterized protein LOC1110236671.8e-1056.36Show/hide
Query:  RLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL
        RLF  Y G+WNEA ++YEGG++ GLDVD+ ITY  L+SA+  LTR DP+QF++++
Subjt:  RLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTCGCCTCTTTTTTAGTTACAATGGTCAGTGGAATGAGGCACAATCTGTCTACGAAGGTGGAATTATAAGAGGTTTGGATGTAGACGATATTATAACATATAATGAGCT
CATAAGTGCTATATTTAGGCTTACCCGAACAGATCCTAACCAGTTCAACATCGTGCTA
mRNA sequenceShow/hide mRNA sequence
TCTCGCCTCTTTTTTAGTTACAATGGTCAGTGGAATGAGGCACAATCTGTCTACGAAGGTGGAATTATAAGAGGTTTGGATGTAGACGATATTATAACATATAATGAGCT
CATAAGTGCTATATTTAGGCTTACCCGAACAGATCCTAACCAGTTCAACATCGTGCTA
Protein sequenceShow/hide protein sequence
SRLFFSYNGQWNEAQSVYEGGIIRGLDVDDIITYNELISAIFRLTRTDPNQFNIVL