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MS004712 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004712
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold741:308303..308413
RNA-Seq ExpressionMS004712
SyntenyMS004712
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5458478.1 hypothetical protein F2P56_022503 [Juglans regia]2.6e-0470.27Show/hide
Query:  IENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII
        ++NLN TYI LI KVK  +LV+D RPISLCNV YKII
Subjt:  IENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII
XP_018853114.2 uncharacterized protein LOC109015083 [Juglans regia]2.6e-0470.27Show/hide
Query:  IENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII
        ++NLN TYI LI KVK  +LV+D RPISLCNV YKII
Subjt:  IENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII
XP_030970335.1 uncharacterized protein LOC115990665 [Quercus lobata]4.4e-0469.44Show/hide
Query:  ENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII
        E+LN T+IALI KVKH + V+D RPISLCNV YK+I
Subjt:  ENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII
XP_042969109.1 uncharacterized protein LOC122301799 [Carya illinoinensis]9.9e-0467.57Show/hide
Query:  IENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII
        I  LN+TYIALI K KH  LVS+ RPISLCNV YK++
Subjt:  IENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII
TrEMBL top hitse value%identityAlignment
A0A2I4HAC4 uncharacterized protein LOC1090150831.3e-0470.27Show/hide
Query:  IENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII
        ++NLN TYI LI KVK  +LV+D RPISLCNV YKII
Subjt:  IENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII
A0A5B7A5I4 Reverse transcriptase domain-containing protein2.8e-0467.57Show/hide
Query:  IENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII
        I  +NKTYI LI K+K+ R VSD RPISLCNV YK+I
Subjt:  IENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCGAAAATTTGAATAAAACCTATATTGCTCTTATTCAGAAAGTGAAGCATCTGAGGTTAGTGTCTGATTCTAGACCCATTAGCTTATGTAATGTGTGTTATAAGATCAT
T
mRNA sequenceShow/hide mRNA sequence
ATCGAAAATTTGAATAAAACCTATATTGCTCTTATTCAGAAAGTGAAGCATCTGAGGTTAGTGTCTGATTCTAGACCCATTAGCTTATGTAATGTGTGTTATAAGATCAT
T
Protein sequenceShow/hide protein sequence
IENLNKTYIALIQKVKHLRLVSDSRPISLCNVCYKII