CuGenDBv2

Gene ID	MS004761
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CRM domain-containing protein
Genome location	scaffold176:50530..53032
RNA-Seq Expression	MS004761
Synteny	MS004761
Gene Ontology terms	GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR001890 - RNA-binding, CRM domain IPR035920 - YhbY-like superfamily IPR040286 - CRM domain-containing protein At3g25440-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6580934.1 putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-169

79.51

Show/hide

Query:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS
        RP+LGVPD+ FS+ K+FPL NIS+P LGFRN S+GSV+LVISQGKPKFETHEVDPPKK KWKTKK+LK+QRKREK+KR+AANKKDPR LRVKGKKKQ+FS
Subjt:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS

Query:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD
        NAEERIKHKLEKARIKEALLIERLKRYEVP VQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV CKPCKPGQVH+
Subjt:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD

Query:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L
        YAQEIARLSGGI IQIIGDD IIFYRGK+YVQPEVMSPIDTLSKKRALEKSKYEQSLESV+RFIAIAEKELELYYRH+ALYGDPNDRNPLSILD+PSD L
Subjt:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L

Query:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ
        K SQKHQV +ME+S S ALCLASD++N RN + SDDES +I ++ ADS  STSE++ ESD L D ++G  EGS               SA + KF FHNQ
Subjt:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ

Query:  ELLIN
        EL I+
Subjt:  ELLIN

KAG7017679.1 putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-169

79.51

Show/hide

Query:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS
        RP+LGVPD+ FS+ K+FPL NIS+P LGFRN S+GSV+LVISQGKPKFETHEVDPPKK KWKTKK+LK+QRKREK+KR+AANKKDPR LRVKGKKKQ+FS
Subjt:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS

Query:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD
        NAEERIKHKLEKARIKEALLIERLKRYEVP VQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV CKPCKPGQVH+
Subjt:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD

Query:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L
        YAQEIARLSGGI IQIIGDD IIFYRGK+YVQPEVMSPIDTLSKKRALEKSKYEQSLESV+RFIAIAEKELELYYRH+ALYGDPNDRNPLSILD+PSD L
Subjt:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L

Query:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ
        K SQKHQV +ME+S S ALCLASD++N RN + SDDES +I ++ ADS  STSE++ ESD L D ++G  EGS               SA + KF FHNQ
Subjt:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ

Query:  ELLIN
        EL I+
Subjt:  ELLIN

XP_022156591.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Momordica charantia]

6.2e-205

97.93

Show/hide

Query:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS
        RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQ+FS
Subjt:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS

Query:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD
        NAEERIKHKL KARIKEALLIERLKRYEVPMVQGPLVKP NLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVI KPCKPGQVHD
Subjt:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD

Query:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L
        YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD L
Subjt:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L

Query:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFETKFGFHNQEL
        KESQKHQVCQMENSDSTALCLASDL+N RNLDLSD ESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFETKFGFHNQEL
Subjt:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFETKFGFHNQEL

XP_022935659.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita moschata]

2.5e-169

79.75

Show/hide

Query:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS
        RP+LGVPD+ FS+ K+FPL NISKP LGFRN S+GSV+LVISQGKPKFETHEVDPPKK KWKTKK+LK+QRKREK+KR+AANKKDPR LRVKGKKKQ+FS
Subjt:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS

Query:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD
        NAEERIKHKLEKARIKEALLIERLKRYEVP VQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV CKPCKPGQVH+
Subjt:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD

Query:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L
        YAQEIARLSGGI IQIIGDD IIFYRGK+YVQPEVMSPIDTLSKKRALEKSKYEQSLESV+RFIAIAEKELELYYRH+ALYGDPNDRNPLSILD+PSD L
Subjt:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L

Query:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ
        K S KHQV +ME+S S ALCLASD++N RN + SDDES +I ++ ADS  STSES+ ESD L D ++G  EGS               SA + KF FHNQ
Subjt:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ

Query:  ELLIN
        EL I+
Subjt:  ELLIN

XP_023526219.1 CRM-domain containing factor CFM2, chloroplastic [Cucurbita pepo subsp. pepo]

3.9e-167

79.01

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Query:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS
        RP+ GVPD+ FS  K FPL NISKP LGFRN S+GSV+LVISQGKPKFETHEVDPPKK KWKTKK+LKVQRKREK+KR+AANKKDPR LRVKGKKKQ+FS
Subjt:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS

Query:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD
        NAEERIKHKLEKARIKEALLIERLKRYEVP VQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV CKPCKPGQV +
Subjt:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD

Query:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L
        YAQEIARLSGGI IQIIGDD IIFYRGK+YVQPEVMSPIDTLSKKRALEKSKYEQSLE V+RFIAIAEKELELYYRH+ALYGDPNDRNPLSILD+PSD L
Subjt:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L

Query:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ
        K SQKHQV +ME+S S ALCLASD++N +N + SDDES +I ++ ADS  STSES+ ESD L D ++G  EGS               SA + KF +HNQ
Subjt:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ

Query:  ELLIN
        EL I+
Subjt:  ELLIN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B7C2 CRM-domain containing factor CFM3, chloroplastic/mitochondrial

3.3e-164

77.53

Show/hide

Query:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS
        RPIL +PDTVFSQ K+FP  NISKP LGFRN SHGSV+LV++QGKPKFETH VDPPKK KWKTKK+LK+QR R K+KR+AANK+DPR LRVKGKKKQ+F 
Subjt:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS

Query:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD
        NA ERIK+KLE+ARIKEALLIERLKRYEVP VQGP+VKPHNLTAEERFY+KKMGQKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV CKPCKPGQVH+
Subjt:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD

Query:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L
        YAQEIARLSGGI IQIIGDD IIFYRGK+YVQPEVMSPI TLSKKRALEKSKYEQSLESV+RFIAIAEKELELYYRHIALYGDPNDRNPLSIL++PSD L
Subjt:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L

Query:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ
        K S KHQ+  ME+S S ALCL SD++N RN D SDDES DI D+  D+  STSESD ESDKL +SD+G  E S               SAF+ K  FH Q
Subjt:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ

Query:  ELLIN
        EL I+
Subjt:  ELLIN

A0A5A7UFD6 CRM-domain containing factor CFM3

3.3e-164

77.53

Show/hide

Query:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS
        RPIL +PDTVFSQ K+FP  NISKP LGFRN SHGSV+LV++QGKPKFETH VDPPKK KWKTKK+LK+QR R K+KR+AANK+DPR LRVKGKKKQ+F 
Subjt:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS

Query:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD
        NA ERIK+KLE+ARIKEALLIERLKRYEVP VQGP+VKPHNLTAEERFY+KKMGQKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV CKPCKPGQVH+
Subjt:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD

Query:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L
        YAQEIARLSGGI IQIIGDD IIFYRGK+YVQPEVMSPI TLSKKRALEKSKYEQSLESV+RFIAIAEKELELYYRHIALYGDPNDRNPLSIL++PSD L
Subjt:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L

Query:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ
        K S KHQ+  ME+S S ALCL SD++N RN D SDDES DI D+  D+  STSESD ESDKL +SD+G  E S               SAF+ K  FH Q
Subjt:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ

Query:  ELLIN
        EL I+
Subjt:  ELLIN

A0A6J1DSE1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic

3.0e-205

97.93

Show/hide

Query:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS
        RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQ+FS
Subjt:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS

Query:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD
        NAEERIKHKL KARIKEALLIERLKRYEVPMVQGPLVKP NLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVI KPCKPGQVHD
Subjt:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD

Query:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L
        YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD L
Subjt:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L

Query:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFETKFGFHNQEL
        KESQKHQVCQMENSDSTALCLASDL+N RNLDLSD ESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFETKFGFHNQEL
Subjt:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFETKFGFHNQEL

A0A6J1F621 uncharacterized CRM domain-containing protein At3g25440, chloroplastic

1.2e-169

79.75

Show/hide

Query:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS
        RP+LGVPD+ FS+ K+FPL NISKP LGFRN S+GSV+LVISQGKPKFETHEVDPPKK KWKTKK+LK+QRKREK+KR+AANKKDPR LRVKGKKKQ+FS
Subjt:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS

Query:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD
        NAEERIKHKLEKARIKEALLIERLKRYEVP VQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV CKPCKPGQVH+
Subjt:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD

Query:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L
        YAQEIARLSGGI IQIIGDD IIFYRGK+YVQPEVMSPIDTLSKKRALEKSKYEQSLESV+RFIAIAEKELELYYRH+ALYGDPNDRNPLSILD+PSD L
Subjt:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L

Query:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ
        K S KHQV +ME+S S ALCLASD++N RN + SDDES +I ++ ADS  STSES+ ESD L D ++G  EGS               SA + KF FHNQ
Subjt:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGS---------------SAFETKFGFHNQ

Query:  ELLIN
        EL I+
Subjt:  ELLIN

A0A6J1J3F1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic

2.0e-161

84.66

Show/hide

Query:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS
        RP+LGVPD+ FS  K+ PL NISKPFLGFRN S+GSV+LVISQGKPKFETHEVDPPKK KWKTKK+LK+QR REK+KR+AANKKDPR LRVKGKKKQ+FS
Subjt:  RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFS

Query:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD
        NAEERIKHKLEKARIKEALLIERLKRYEVP VQGP+V+PHNLTAEERFYMKKMGQKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV CKPCKPGQVH+
Subjt:  NAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHD

Query:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L
        YAQEIARLSGGI IQIIGDD IIFYRGK+YVQP VMSPIDTLSKKRALEKSKYEQSLESV+RFIAIAEKELELYYRH+ALYGDPNDRNPLSILD+PSD L
Subjt:  YAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSD-L

Query:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLST
        K SQKHQV +ME+S S +LCLASD++N RN + SDDES +I ++ ADS  ST
Subjt:  KESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLST

SwissProt top hits

e value

%identity

Alignment

A7XN92 CRM-domain containing factor CFM3, chloroplastic/mitochondrial

1.5e-15

27.34

Show/hide

Query:  PHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAI---QIIGDDMIIFYRGKDYVQPEV
        P  +T EERF  +K+G +   ++ +GRRG+F G I NMH+HWK  E VK++ K      V   A  +   SGGI +   ++     I+ +RGK+Y +P  
Subjt:  PHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAI---QIIGDDMIIFYRGKDYVQPEV

Query:  MSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQMENSDSTALCLASDLINWRNLDLSDD
        + P + LSK++AL +S   Q  +++ R  A   +++E     +    D  ++      ++ + L  +       ME+ D  A     D  N      +DD
Subjt:  MSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQMENSDSTALCLASDLINWRNLDLSDD

Query:  ESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFETKFGFHNQELLINDD
        + SD    +AD        D   D   D      + ++A  +  GFH + +  + D
Subjt:  ESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFETKFGFHNQELLINDD

F4JVH1 CRM-domain containing factor CFM3B, chloroplastic

8.0e-14

30.89

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Query:  QRKREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIF
        + K+E EK R+A     +L+R   K +++ + AE+    KL KA    A + E LK  E             +T EERF  +K+G K   ++ +GRRG+F
Subjt:  QRKREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIF

Query:  GGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAI---QIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAI
         G + NMH+HWK  E +K++ K          A  +   SGGI +   +I     +I YRGKDY +P  + P + L+K++AL +S   Q  E++ + I  
Subjt:  GGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAI---QIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAI

Query:  AE---KELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSE--SDKL
         +   ++L      + L  D  D      LD+     E       + E +D        D+     LD  +DE  D E+    +N S SE+D E  SD+ 
Subjt:  AE---KELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQMENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADSNLSTSESDSE--SDKL

Query:  YDSDNGSTEGSSAF-ETKF-GFHNQEL
         D+D G    SS   ET F    N+EL
Subjt:  YDSDNGSTEGSSAF-ETKF-GFHNQEL

Q2R1U8 CRM-domain containing factor CFM3, chloroplastic/mitochondrial

2.0e-17

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Query:  PHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAI---QIIGDDMIIFYRGKDYVQPEV
        P  +T EERF  +K+G +   ++ +GRRG+F G I NMH+HWK  E VK++ K    G V   A  +   SGGI +   ++     I+ +RGKDY +P  
Subjt:  PHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAI---QIIGDDMIIFYRGKDYVQPEV

Query:  MSPIDTLSKKRALEKSKYEQSLESVQRFIAI-------------------AEKELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQMENSDST
        + P + LSK++AL +S   Q  E++   IA                     E ++ELY +  + Y   +D   +   D  + L+ S  + V      D T
Subjt:  MSPIDTLSKKRALEKSKYEQSLESVQRFIAI-------------------AEKELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQMENSDST

Query:  ALCLASDLINWRNLDLSDDES--SDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFETKFGFHNQE
        +L   SD         SDDE   SD +DD  D N      D E+D   D    +++G     T FG  + E
Subjt:  ALCLASDLINWRNLDLSDDES--SDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFETKFGFHNQE

Q67XL4 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic

3.3e-36

37.38

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Query:  KREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGG
        KR+K K + A  +  +  R K KK+     +EE+I +KL KAR KE  L+E +K+ E          P  LT EE FY  KMG K  NYVP+GRRGI+ G
Subjt:  KREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGG

Query:  VILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQP--EVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEK
        VILNMH+HWKKH+T++V+ K   P +V + A E+ARL+GGI + +   + II YRGK+YVQP  E+MSP  TL +K+AL+KSK   +L +V+++I   E+
Subjt:  VILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQP--EVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEK

Query:  ELELYYRHIALYGDPNDRNPLSILDIPSDLKE-SQKHQVC--QMENSDSTALCLASDLINWRNLDLSD--DESSDIEDDSADSNLSTSE-------SDSE
        EL+L         D  +       +   +LK+  ++ + C    +  D   L LA+D       DLSD  +  S++ED   +  L   E       ++ E
Subjt:  ELELYYRHIALYGDPNDRNPLSILDIPSDLKE-SQKHQVC--QMENSDSTALCLASDLINWRNLDLSD--DESSDIEDDSADSNLSTSE-------SDSE

Query:  SDKLYDSDNGSTEGSSAFETK
         +   D     +EG    + K
Subjt:  SDKLYDSDNGSTEGSSAFETK

Q9LT57 CRM-domain containing factor CFM9, mitochondrial

1.3e-32

32.28

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Query:  RLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGR
        R +  R + + + R  + K  R +R   K K++    EER+ + L++A+ K ALL+++LK+Y++P +  P+  P   T+E+    KK+G K  NYVP+G 
Subjt:  RLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGR

Query:  RGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIA
        RG+FGGV+ NMHMHWK HETV+V C      ++ + A  IARLSGG+ I I     II +RG++Y QP+ + P++TL+K++AL K+++EQ+LES +  I 
Subjt:  RGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIA

Query:  IAEKELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQ-----MENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADS---NLSTSESDSE
          E++L    R + +    N  +P+++  I         H+V       ++  + T      D  + R   + + E S+  D+ +D    +   +E +  
Subjt:  IAEKELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQ-----MENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADS---NLSTSESDSE

Query:  SDKLYDSDNGSTEGSS
        +DK ++ +  + +  S
Subjt:  SDKLYDSDNGSTEGSS

Arabidopsis top hits

e value

%identity

Alignment

AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein

2.0e-116

67.05

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Query:  RNSSH--GSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRY
        RN SH  G+V+LVIS+GKPKFET E+DPPKKYKW TKKRLK++RK+E+E+R AAN+KDPR L VKGKKK +F NAEERIK+KLEKA+IKEALLIERLKRY
Subjt:  RNSSH--GSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRY

Query:  EVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRG
        EV  VQGP V+PH +T EERFY+KKMGQKRSNYVPIGRRG+FGGVILNMH+HWKKHETVKVIC   KPGQV  YA+E+A+LSGG+ + IIGDD IIFYRG
Subjt:  EVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRG

Query:  KDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQMENSDSTALCLASDLINW
        K YVQP+VMSPIDTLSKKRA EKSKYEQSLESV+ FIAIAEKELELYYRH+ALY DPN+RNPLSILD      ES++H                    N 
Subjt:  KDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQMENSDSTALCLASDLINW

Query:  RNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFE
          L  SD +SS             SE + E ++L + DNGS+  SSA E
Subjt:  RNLDLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFE

AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein

2.4e-37

37.38

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Query:  KREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGG
        KR+K K + A  +  +  R K KK+     +EE+I +KL KAR KE  L+E +K+ E          P  LT EE FY  KMG K  NYVP+GRRGI+ G
Subjt:  KREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGG

Query:  VILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQP--EVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEK
        VILNMH+HWKKH+T++V+ K   P +V + A E+ARL+GGI + +   + II YRGK+YVQP  E+MSP  TL +K+AL+KSK   +L +V+++I   E+
Subjt:  VILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQP--EVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEK

Query:  ELELYYRHIALYGDPNDRNPLSILDIPSDLKE-SQKHQVC--QMENSDSTALCLASDLINWRNLDLSD--DESSDIEDDSADSNLSTSE-------SDSE
        EL+L         D  +       +   +LK+  ++ + C    +  D   L LA+D       DLSD  +  S++ED   +  L   E       ++ E
Subjt:  ELELYYRHIALYGDPNDRNPLSILDIPSDLKE-SQKHQVC--QMENSDSTALCLASDLINWRNLDLSD--DESSDIEDDSADSNLSTSE-------SDSE

Query:  SDKLYDSDNGSTEGSSAFETK
         +   D     +EG    + K
Subjt:  SDKLYDSDNGSTEGSSAFETK

AT3G25440.2 RNA-binding CRS1 / YhbY (CRM) domain protein

2.4e-37

37.38

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Query:  KREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGG
        KR+K K + A  +  +  R K KK+     +EE+I +KL KAR KE  L+E +K+ E          P  LT EE FY  KMG K  NYVP+GRRGI+ G
Subjt:  KREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGG

Query:  VILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQP--EVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEK
        VILNMH+HWKKH+T++V+ K   P +V + A E+ARL+GGI + +   + II YRGK+YVQP  E+MSP  TL +K+AL+KSK   +L +V+++I   E+
Subjt:  VILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQP--EVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEK

Query:  ELELYYRHIALYGDPNDRNPLSILDIPSDLKE-SQKHQVC--QMENSDSTALCLASDLINWRNLDLSD--DESSDIEDDSADSNLSTSE-------SDSE
        EL+L         D  +       +   +LK+  ++ + C    +  D   L LA+D       DLSD  +  S++ED   +  L   E       ++ E
Subjt:  ELELYYRHIALYGDPNDRNPLSILDIPSDLKE-SQKHQVC--QMENSDSTALCLASDLINWRNLDLSD--DESSDIEDDSADSNLSTSE-------SDSE

Query:  SDKLYDSDNGSTEGSSAFETK
         +   D     +EG    + K
Subjt:  SDKLYDSDNGSTEGSSAFETK

AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein

9.3e-34

32.28

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Query:  RLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGR
        R +  R + + + R  + K  R +R   K K++    EER+ + L++A+ K ALL+++LK+Y++P +  P+  P   T+E+    KK+G K  NYVP+G 
Subjt:  RLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGR

Query:  RGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIA
        RG+FGGV+ NMHMHWK HETV+V C      ++ + A  IARLSGG+ I I     II +RG++Y QP+ + P++TL+K++AL K+++EQ+LES +  I 
Subjt:  RGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIA

Query:  IAEKELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQ-----MENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADS---NLSTSESDSE
          E++L    R + +    N  +P+++  I         H+V       ++  + T      D  + R   + + E S+  D+ +D    +   +E +  
Subjt:  IAEKELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQ-----MENSDSTALCLASDLINWRNLDLSDDESSDIEDDSADS---NLSTSESDSE

Query:  SDKLYDSDNGSTEGSS
        +DK ++ +  + +  S
Subjt:  SDKLYDSDNGSTEGSS

AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein

9.0e-61

49.22

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Query:  RNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEV
        R  S+ +++L       +F  + V         T+K  K +R +   K   A   + R  R+K KKK    N E RI++KLEKA+ KE  LIE+L++Y+V
Subjt:  RNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKLEKARIKEALLIERLKRYEV

Query:  PMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPC-KPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRGK
        P        P +LT EE+ Y+K+ G+KR N+V +GRRG+FGGV+LN+H+HWKKHETVKVICKPC KPGQVH+YA+E+ARLS GI I +  ++ I+ YRGK
Subjt:  PMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPC-KPGQVHDYAQEIARLSGGIAIQIIGDDMIIFYRGK

Query:  DYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPND
        +YV+PEVMSP+DTLSK +ALEK +YEQSLE    FI   EKELE Y++++A +    D
Subjt:  DYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPND

Sequences

Show/hide sequences

CDS sequence

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AGACCTATTCTTGGAGTACCTGACACTGTTTTCTCTCAATTCAAACACTTTCCTCTGCCCAACATCTCAAAACCTTTCTTGGGATTTAGAAACTCGAGCCACGGTTCTGT
GGATCTTGTCATATCTCAAGGGAAACCGAAATTTGAAACACATGAAGTGGATCCTCCGAAAAAGTATAAGTGGAAAACTAAGAAAAGGTTGAAGGTTCAGCGAAAGAGAG
AGAAGGAGAAAAGAAGAGCAGCAAACAAGAAAGACCCTCGTCTACTACGTGTAAAGGGAAAGAAAAAGCAGAGGTTTTCAAATGCAGAAGAGAGAATCAAGCACAAGCTG
GAAAAGGCCAGGATTAAGGAGGCATTGCTGATTGAGAGATTAAAGCGGTATGAAGTTCCAATGGTTCAGGGCCCTTTGGTGAAACCACACAATCTAACTGCTGAGGAACG
GTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCCATTGGAAGAAGAGGAATTTTTGGAGGTGTGATTCTAAACATGCACATGCATTGGAAGAAACATG
AAACAGTTAAAGTTATTTGCAAGCCTTGTAAACCCGGCCAAGTGCATGATTATGCCCAGGAAATTGCAAGATTGAGTGGAGGGATCGCAATACAGATAATTGGTGATGAT
ATGATTATTTTTTATCGAGGAAAGGACTACGTGCAACCAGAAGTTATGTCACCAATCGATACATTATCTAAGAAACGTGCGCTAGAAAAATCCAAGTATGAGCAATCACT
CGAGTCTGTACAGCGATTTATCGCTATCGCTGAGAAGGAACTGGAGCTATATTACAGGCATATTGCACTTTATGGTGATCCAAATGATAGGAATCCATTGTCCATCTTGG
ACATTCCATCTGACTTGAAGGAATCACAGAAACATCAAGTTTGTCAAATGGAAAACTCTGATTCTACTGCTCTTTGCTTAGCTTCTGATCTTATAAACTGGAGAAATCTC
GATTTGTCCGATGACGAATCATCAGACATTGAAGATGACTCTGCAGATTCCAACTTATCTACAAGTGAATCAGATTCTGAAAGTGACAAATTATATGATTCTGATAATGG
GAGTACAGAAGGAAGTTCAGCTTTTGAGACTAAATTTGGATTTCATAACCAAGAATTACTGATAAATGATGATGAC

mRNA sequence

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Protein sequence

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RPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSHGSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGKKKQRFSNAEERIKHKL
EKARIKEALLIERLKRYEVPMVQGPLVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIAIQIIGDD
MIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVQRFIAIAEKELELYYRHIALYGDPNDRNPLSILDIPSDLKESQKHQVCQMENSDSTALCLASDLINWRNL
DLSDDESSDIEDDSADSNLSTSESDSESDKLYDSDNGSTEGSSAFETKFGFHNQELLINDDD

MS004761 (gene) of Bitter gourd (TR) v1 genome