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MS004763 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004763
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold176:55259..55444
RNA-Seq ExpressionMS004763
SyntenyMS004763
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0005544 - calcium-dependent phospholipid binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]1.3e-1156.14Show/hide
Query:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
        G V   A +WGC+VG WP+LYLG+PLGGNP+   FW P+ EKVE +L KW    LS+
Subjt:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
VVA13439.1 Hypothetical predicted protein, partial [Prunus dulcis]1.3e-1156.14Show/hide
Query:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
        G V   A +WGC+VG WP+LYLG+PLGGNP+   FW P+ EKVE +L KW    LS+
Subjt:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
VVA21938.1 Hypothetical predicted protein, partial [Prunus dulcis]1.3e-1156.14Show/hide
Query:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
        G V   A +WGC+VG WP+LYLG+PLGGNP+   FW P+ EKVE +L KW    LS+
Subjt:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
VVA25489.1 Hypothetical predicted protein, partial [Prunus dulcis]1.3e-1156.14Show/hide
Query:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
        G V   A +WGC+VG WP+LYLG+PLGGNP+   FW P+ EKVE +L KW    LS+
Subjt:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
VVA39726.1 Hypothetical predicted protein, partial [Prunus dulcis]9.7e-1257.89Show/hide
Query:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
        G V   A +WGCEVG WP+LYLG+PLGGNP+   FW P+ EKVE +L KW    LS+
Subjt:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
TrEMBL top hitse value%identityAlignment
A0A4Y1R3V4 VIRB2-interacting protein 26.1e-1256.14Show/hide
Query:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
        G V   A +WGC+VG WP+LYLG+PLGGNP+   FW P+ EKVE +L KW    LS+
Subjt:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
A0A5E4FED8 Reverse transcriptase domain-containing protein (Fragment)6.1e-1256.14Show/hide
Query:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
        G V   A +WGC+VG WP+LYLG+PLGGNP+   FW P+ EKVE +L KW    LS+
Subjt:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
A0A5E4GJ11 Reverse transcriptase domain-containing protein (Fragment)4.7e-1257.89Show/hide
Query:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
        G V   A +WGCEVG WP+LYLG+PLGGNP+   FW P+ EKVE +L KW    LS+
Subjt:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
A0A5E4GN72 PREDICTED: RNA-directed DNA polymerase (Fragment)6.1e-1256.14Show/hide
Query:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
        G V   A +WGC+VG WP+LYLG+PLGGNP+   FW P+ EKVE +L KW    LS+
Subjt:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
A0A5H2XKI7 VIRB2-interacting protein 26.1e-1256.14Show/hide
Query:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
        G V   A +WGC+VG WP+LYLG+PLGGNP+   FW P+ EKVE +L KW    LS+
Subjt:  GKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTNACATCCCTAAAGGTAAAGTTGCCTCTAGAGCCATTAGCTGGGGATGTGAAGTTGGGCAGTGGCCTATCCTCTATCTGGGCATGCCGTTGGGAGGAAATCCAAAGAA
GAAGTCATTTTGGCAGCCTATAGAAGAGAAAGTGGAAAGAAAATTGACTAAGTGGAATTCTTTGCATCTGTCCAGG
mRNA sequenceShow/hide mRNA sequence
TTTNACATCCCTAAAGGTAAAGTTGCCTCTAGAGCCATTAGCTGGGGATGTGAAGTTGGGCAGTGGCCTATCCTCTATCTGGGCATGCCGTTGGGAGGAAATCCAAAGAA
GAAGTCATTTTGGCAGCCTATAGAAGAGAAAGTGGAAAGAAAATTGACTAAGTGGAATTCTTTGCATCTGTCCAGG
Protein sequenceShow/hide protein sequence
FXIPKGKVASRAISWGCEVGQWPILYLGMPLGGNPKKKSFWQPIEEKVERKLTKWNSLHLSR