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MS004765 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004765
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold176:55931..56416
RNA-Seq ExpressionMS004765
SyntenyMS004765
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039967.1 hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa]9.5e-3548.28Show/hide
Query:  WRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGWIRFRNIPLHL
        W  T+VLTRR FHDDWERI   + EQ + T    PF+ DKAL+    EE A LL  N+GW T G    K E W    H     IPSYGGWI+ R +PLH 
Subjt:  WRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGWIRFRNIPLHL

Query:  WSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP
        W+L +F  IGD  GGF++ A +   L D  E +I+++ NY GFIP
Subjt:  WSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP

KAA0041398.1 hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa]8.6e-3646.06Show/hide
Query:  PAQRREVRA------LIWRDTLVLTRRDFHDDWERIRGFIQEQT---EETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGK
        PA + E+R       + W  T++L+RR FHDDW++I   ++EQT   E  F   PF  DKALL    ++LA LL  N GW T GP   K E+W    H  
Subjt:  PAQRREVRA------LIWRDTLVLTRRDFHDDWERIRGFIQEQT---EETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGK

Query:  INAIPSYGGWIRFRNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP
           IPSYGGW RFR IPLH+W+L TF  IG+  GGFID A ++ + I+  E  I+V+ NY GF+P
Subjt:  INAIPSYGGWIRFRNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP

KAA0044557.1 hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa]1.9e-3545.45Show/hide
Query:  PAQRREVRA------LIWRDTLVLTRRDFHDDWERIRGFIQEQTEE---TFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGK
        PA + E+R       + W  T++L+RR FHDDW++I   ++EQT++    F   PF  DKALL    ++LA LL  N GW T GP   K E+W    H  
Subjt:  PAQRREVRA------LIWRDTLVLTRRDFHDDWERIRGFIQEQTEE---TFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGK

Query:  INAIPSYGGWIRFRNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP
           IPSYGGW RFR IPLH+W+L TF  IG+  GGFID A ++ + I+  E  I+V+ NY GF+P
Subjt:  INAIPSYGGWIRFRNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP

KAA0050054.1 hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]1.2e-3447.59Show/hide
Query:  WRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGWIRFRNIPLHL
        W  T+VLTRR FHDDWE+I   + EQ + T    PF  DKAL+    EE A L+  N+GW T G    K E W+   H     IPSYGGWI+ R +PLH 
Subjt:  WRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGWIRFRNIPLHL

Query:  WSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP
        W+L +F  IGD  GGFI+ A +   L D  E +I+++ NY GFIP
Subjt:  WSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]5.5e-5964.52Show/hide
Query:  AQRREVRALIWRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGW
        A   EVR L W +T+V+TRRDFHDDW RI  +++EQTE +++INPFQ DKAL+KCP+++LA LL +N+GWVTFGPVT KLE W+PL HG+    PSYG W
Subjt:  AQRREVRALIWRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGW

Query:  IRFRNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP
        ++ RNIPLHLWSL TFKAIG+  GGFIDY D NS  I+C +VAI+V+ NYCGFIP
Subjt:  IRFRNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP

TrEMBL top hitse value%identityAlignment
A0A5A7TEK8 DUF4283 domain-containing protein4.6e-3548.28Show/hide
Query:  WRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGWIRFRNIPLHL
        W  T+VLTRR FHDDWERI   + EQ + T    PF+ DKAL+    EE A LL  N+GW T G    K E W    H     IPSYGGWI+ R +PLH 
Subjt:  WRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGWIRFRNIPLHL

Query:  WSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP
        W+L +F  IGD  GGF++ A +   L D  E +I+++ NY GFIP
Subjt:  WSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP

A0A5A7TEP0 DUF4283 domain-containing protein4.2e-3646.06Show/hide
Query:  PAQRREVRA------LIWRDTLVLTRRDFHDDWERIRGFIQEQT---EETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGK
        PA + E+R       + W  T++L+RR FHDDW++I   ++EQT   E  F   PF  DKALL    ++LA LL  N GW T GP   K E+W    H  
Subjt:  PAQRREVRA------LIWRDTLVLTRRDFHDDWERIRGFIQEQT---EETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGK

Query:  INAIPSYGGWIRFRNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP
           IPSYGGW RFR IPLH+W+L TF  IG+  GGFID A ++ + I+  E  I+V+ NY GF+P
Subjt:  INAIPSYGGWIRFRNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP

A0A5A7TRS9 DUF4283 domain-containing protein9.3e-3645.45Show/hide
Query:  PAQRREVRA------LIWRDTLVLTRRDFHDDWERIRGFIQEQTEE---TFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGK
        PA + E+R       + W  T++L+RR FHDDW++I   ++EQT++    F   PF  DKALL    ++LA LL  N GW T GP   K E+W    H  
Subjt:  PAQRREVRA------LIWRDTLVLTRRDFHDDWERIRGFIQEQTEE---TFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGK

Query:  INAIPSYGGWIRFRNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP
           IPSYGGW RFR IPLH+W+L TF  IG+  GGFID A ++ + I+  E  I+V+ NY GF+P
Subjt:  INAIPSYGGWIRFRNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP

A0A5A7U495 DUF4283 domain-containing protein6.0e-3547.59Show/hide
Query:  WRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGWIRFRNIPLHL
        W  T+VLTRR FHDDWE+I   + EQ + T    PF  DKAL+    EE A L+  N+GW T G    K E W+   H     IPSYGGWI+ R +PLH 
Subjt:  WRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGWIRFRNIPLHL

Query:  WSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP
        W+L +F  IGD  GGFI+ A +   L D  E +I+++ NY GFIP
Subjt:  WSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP

A0A6J1D6X4 uncharacterized protein LOC1110181862.7e-5964.52Show/hide
Query:  AQRREVRALIWRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGW
        A   EVR L W +T+V+TRRDFHDDW RI  +++EQTE +++INPFQ DKAL+KCP+++LA LL +N+GWVTFGPVT KLE W+PL HG+    PSYG W
Subjt:  AQRREVRALIWRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGW

Query:  IRFRNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP
        ++ RNIPLHLWSL TFKAIG+  GGFIDY D NS  I+C +VAI+V+ NYCGFIP
Subjt:  IRFRNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCCAAAGACAGCCCGTCTCCAGCACAAAGACGGGAAGTAAGAGCTCTAATTTGGCGGGATACTCTAGTGCTCACCCGTCGTGATTTCCACGATGATTGGGAAAGGATTCG
TGGTTTTATACAAGAACAGACTGAAGAAACATTTCTCATAAACCCTTTCCAACCGGACAAAGCCCTCCTTAAATGCCCCACTGAGGAACTAGCAACTTTATTATCCAGTA
ATAGAGGGTGGGTTACGTTTGGTCCAGTCACAGCGAAGTTAGAGAGATGGGACCCGTTGAAACATGGAAAAATAAATGCGATCCCATCCTATGGAGGGTGGATTCGCTTT
AGAAATATTCCTCTTCATTTATGGAGCCTTACAACCTTTAAAGCCATAGGAGACTGTTTTGGAGGCTTCATTGACTATGCAGACCAAAACTCCAGCCTTATTGACTGTGC
GGAGGTCGCCATCCAAGTTCAAGGGAATTACTGCGGTTTCATCCCT
mRNA sequenceShow/hide mRNA sequence
CCCAAAGACAGCCCGTCTCCAGCACAAAGACGGGAAGTAAGAGCTCTAATTTGGCGGGATACTCTAGTGCTCACCCGTCGTGATTTCCACGATGATTGGGAAAGGATTCG
TGGTTTTATACAAGAACAGACTGAAGAAACATTTCTCATAAACCCTTTCCAACCGGACAAAGCCCTCCTTAAATGCCCCACTGAGGAACTAGCAACTTTATTATCCAGTA
ATAGAGGGTGGGTTACGTTTGGTCCAGTCACAGCGAAGTTAGAGAGATGGGACCCGTTGAAACATGGAAAAATAAATGCGATCCCATCCTATGGAGGGTGGATTCGCTTT
AGAAATATTCCTCTTCATTTATGGAGCCTTACAACCTTTAAAGCCATAGGAGACTGTTTTGGAGGCTTCATTGACTATGCAGACCAAAACTCCAGCCTTATTGACTGTGC
GGAGGTCGCCATCCAAGTTCAAGGGAATTACTGCGGTTTCATCCCT
Protein sequenceShow/hide protein sequence
PKDSPSPAQRREVRALIWRDTLVLTRRDFHDDWERIRGFIQEQTEETFLINPFQPDKALLKCPTEELATLLSSNRGWVTFGPVTAKLERWDPLKHGKINAIPSYGGWIRF
RNIPLHLWSLTTFKAIGDCFGGFIDYADQNSSLIDCAEVAIQVQGNYCGFIP