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MS004774 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004774
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold176:187866..188018
RNA-Seq ExpressionMS004774
SyntenyMS004774
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PNX71533.1 ribonuclease H [Trifolium pratense]8.0e-0445.83Show/hide
Query:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESA
        W   V  K+K   W++ KNI+P +SNL +KGI  D LC  C + EES+
Subjt:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESA

RYR32240.1 hypothetical protein Ahy_A10g046827 [Arachis hypogaea]4.7e-0439.58Show/hide
Query:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESA
        WN    QK+K+  WK+  NIIP+++NL +K ++T+++C  C   EE++
Subjt:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESA

RYR36428.1 hypothetical protein Ahy_A09g041389 [Arachis hypogaea]8.0e-0439.58Show/hide
Query:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESA
        WN    QK+K+  WK+  NIIP+++NL  K ++T+++C  C   EE++
Subjt:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESA

VVA38592.1 PREDICTED: reverse mRNAase, partial [Prunus dulcis]4.7e-0440.82Show/hide
Query:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESAV
        WN  V  K+KI  W++  +I+P K+NL++KG+   ++C FC +  ESA+
Subjt:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESAV

XP_025703912.1 uncharacterized protein LOC112805796 [Arachis hypogaea]2.7e-0439.58Show/hide
Query:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESA
        WN    QK+K+  WK+  NIIP+++NL +K ++T+++C  C   EE++
Subjt:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESA

TrEMBL top hitse value%identityAlignment
A0A445B0R3 Uncharacterized protein2.3e-0439.58Show/hide
Query:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESA
        WN    QK+K+  WK+  NIIP+++NL +K ++T+++C  C   EE++
Subjt:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESA

A0A5E4GGB8 PREDICTED: reverse mRNAase (Fragment)2.3e-0440.82Show/hide
Query:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESAV
        WN  V  K+KI  W++  +I+P K+NL++KG+   ++C FC +  ESA+
Subjt:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESAV

M5VU98 Reverse transcriptase domain-containing protein2.3e-0440.82Show/hide
Query:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESAV
        WN  V  K+KI  W++  +I+P K+NL++KG+   ++C FC +  ESA+
Subjt:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESAV

M5XHI9 Reverse transcriptase domain-containing protein2.3e-0440.82Show/hide
Query:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESAV
        WN  V  K+KI  W++  +I+P K+NL++KG+   ++C FC +  ESA+
Subjt:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESAV

M5XK32 Reverse transcriptase domain-containing protein (Fragment)2.3e-0440.82Show/hide
Query:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESAV
        WN  V  K+KI  W++  +I+P K+NL++KG+   ++C FC +  ESA+
Subjt:  WNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCTGGAACACATATGTGGCACAAAAGATGAAGATCGCCTGCTGGAAGATAGGGAAAAACATAATCCCTATAAAATCAAACCTTCTTAGAAAAGGAATTGTGACTGATAA
TCTGTGCTCTTTTTGCAGGAATCATGAGGAATCTGCGGTCCTC
mRNA sequenceShow/hide mRNA sequence
TTCTGGAACACATATGTGGCACAAAAGATGAAGATCGCCTGCTGGAAGATAGGGAAAAACATAATCCCTATAAAATCAAACCTTCTTAGAAAAGGAATTGTGACTGATAA
TCTGTGCTCTTTTTGCAGGAATCATGAGGAATCTGCGGTCCTC
Protein sequenceShow/hide protein sequence
FWNTYVAQKMKIACWKIGKNIIPIKSNLLRKGIVTDNLCSFCRNHEESAVL