; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004788 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004788
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS4 RNA-binding domain-containing protein
Genome locationscaffold176:440228..447255
RNA-Seq ExpressionMS004788
SyntenyMS004788
Gene Ontology termsGO:0032259 - methylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR002877 - Ribosomal RNA methyltransferase FtsJ domain
IPR002942 - RNA-binding S4 domain
IPR004538 - Haemolysin A /rRNA methyltransferase TlyA
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593038.1 hypothetical protein SDJN03_12514, partial [Cucurbita argyrosperma subsp. sororia]6.7e-14387.21Show/hide
Query:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII
        MSK  L+RNN ARIFL+SP +C   H++SPK+FS AKSGKIQ LNLKKK+RLDE+CVERYQQYSRTIIQSWILQGKVLVDG+VVSKAGTPVGDKAKVEII
Subjt:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII

Query:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
        AE+PKYVCRAGFKLEAAIEQLGVDV G+VALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
Subjt:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI

Query:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD
        SILLVMPAVV+VMKETST+VTLVKPQFECRRSQVGG G+VRDP VHQEV+EKIIKGV++FGFCS+GWIESP+KGAEGNTEFL CF RTT +S+A+ D
Subjt:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD

KAG7025446.1 yqxC [Cucurbita argyrosperma subsp. argyrosperma]3.0e-14387.54Show/hide
Query:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII
        MSK  L+RNN ARIFL+SP +C   H++SPK+FS AKSGKIQ LNLKKK+RLDE+CVERYQQYSRTIIQSWILQGKVLVDG+VVSKAGTPVGDKAKVEII
Subjt:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII

Query:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
        AE+PKYVCRAGFKLEAAIEQLGVDV GKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
Subjt:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI

Query:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD
        SILLVMPAVV+VMKETST+VTLVKPQFECRRSQVGG G+VRDP VHQEV+EKIIKGV++FGFCS+GWIESP+KGAEGNTEFL CF RTT +S+A+ D
Subjt:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD

XP_022157878.1 uncharacterized protein LOC111024489 isoform X2 [Momordica charantia]3.9e-15997.98Show/hide
Query:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII
        MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFS+AKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII
Subjt:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII

Query:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
        AEIPKYVCRAGFKLEAAIEQ GVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQV DKIRRDE VCVMERTNLRYLAGLPQKVDIVTLDLSFI
Subjt:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI

Query:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD
        SILLVMPAVVSVMKE STLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGV+NFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD
Subjt:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD

XP_022960528.1 uncharacterized protein LOC111461240 isoform X1 [Cucurbita moschata]1.0e-14387.88Show/hide
Query:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII
        MSK  L+RNN ARIFL+SP +C   H++SPK+FS+AKSGKIQ LNLKKK+RLDE+CVERYQQYSRTIIQSWILQGKVLVDG+VVSKAGTPVGDKAKVEII
Subjt:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII

Query:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
        AE+PKYVCRAGFKLEAAIEQLGVDV GKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
Subjt:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI

Query:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD
        SILLVMPAVV+VMKETST+VTLVKPQFECRRSQVGG GIVRDP VHQEV+EKIIKGV++FGFCS+GWIESP+KGAEGNTEFL CF RTT +S+A+ D
Subjt:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD

XP_038899562.1 putative rRNA methyltransferase YqxC [Benincasa hispida]9.3e-14589.08Show/hide
Query:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII
        MSK  L+RNNCARIFLLSPLS SP  ++SPK+FS+AKSGKI  LNLKKK+RLDE+CVERYQQYSRT+IQSWILQGKVLVDG+V+SKAGTPVGDKAKVEII
Subjt:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII

Query:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
        AE+PKYVCRAG KLEAAIEQLGVDV GKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
Subjt:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI

Query:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSS
        SILLVMPAVV+VMKETST+VTLVKPQFECRRSQVGGGGIVRDP VHQEV+EKIIKGV+NFGFCS+GWIESP+KGAEGNTEFL CF+RTT  +S
Subjt:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSS

TrEMBL top hitse value%identityAlignment
A0A0A0KA33 S4 RNA-binding domain-containing protein5.5e-14387.71Show/hide
Query:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII
        M K  L+RNNCARIFL SPLS SP H+ SPK+FS+AKSGKIQ L LKKKRRLDE+CVERYQQ+SRT+IQSWILQGKVLVDG+V+SKAGTPV DKAKVEII
Subjt:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII

Query:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
        AE+PKYVCRAG KLEAAIEQL VDV GKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
Subjt:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI

Query:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSS
        SILLVMPAV++VMKETST+VTLVKPQFECRRSQVGGGGIVRDP VHQEV+EKIIKGV+NFGFCS+GWIESP+KGAEGNTEFL CF+RTT  +S
Subjt:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSS

A0A1S3C7N4 putative rRNA methyltransferase YqxC isoform X12.7e-14287.71Show/hide
Query:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII
        MSK  L+RNNCARI L SP S SP H+ SPK+FS+AKSGKIQ L LKKKRRLDE+CVERYQQ+SRT+IQSWILQGKVLVDG+V+SKAGTPV DKAKVEII
Subjt:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII

Query:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
        AE+PKYVCRAG KLEAAIEQL VDV GKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
Subjt:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI

Query:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSS
        SILLVMPAVV+VMKETST+VTLVKPQFECRRSQVGGGGIVRDP VHQEV+EKIIKGV+NFGFCS+GWIESP+KGAEGNTEFL CF+RTT  +S
Subjt:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSS

A0A5D3BCA3 Putative rRNA methyltransferase YqxC isoform X12.7e-14287.71Show/hide
Query:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII
        MSK  L+RNNCARI L SP S SP H+ SPK+FS+AKSGKIQ L LKKKRRLDE+CVERYQQ+SRT+IQSWILQGKVLVDG+V+SKAGTPV DKAKVEII
Subjt:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII

Query:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
        AE+PKYVCRAG KLEAAIEQL VDV GKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
Subjt:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI

Query:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSS
        SILLVMPAVV+VMKETST+VTLVKPQFECRRSQVGGGGIVRDP VHQEV+EKIIKGV+NFGFCS+GWIESP+KGAEGNTEFL CF+RTT  +S
Subjt:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSS

A0A6J1DUJ9 uncharacterized protein LOC111024489 isoform X21.9e-15997.98Show/hide
Query:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII
        MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFS+AKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII
Subjt:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII

Query:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
        AEIPKYVCRAGFKLEAAIEQ GVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQV DKIRRDE VCVMERTNLRYLAGLPQKVDIVTLDLSFI
Subjt:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI

Query:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD
        SILLVMPAVVSVMKE STLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGV+NFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD
Subjt:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD

A0A6J1H982 uncharacterized protein LOC111461240 isoform X15.0e-14487.88Show/hide
Query:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII
        MSK  L+RNN ARIFL+SP +C   H++SPK+FS+AKSGKIQ LNLKKK+RLDE+CVERYQQYSRTIIQSWILQGKVLVDG+VVSKAGTPVGDKAKVEII
Subjt:  MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEII

Query:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
        AE+PKYVCRAGFKLEAAIEQLGVDV GKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI
Subjt:  AEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFI

Query:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD
        SILLVMPAVV+VMKETST+VTLVKPQFECRRSQVGG GIVRDP VHQEV+EKIIKGV++FGFCS+GWIESP+KGAEGNTEFL CF RTT +S+A+ D
Subjt:  SILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD

SwissProt top hitse value%identityAlignment
P19672 Putative rRNA methyltransferase YqxC3.6e-4342.32Show/hide
Query:  KKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQH
        KK RLD + VER    +R   +  I+ G V  +   + K G  +     + +     +YV R G KLE A+++  V V  K+ +D G STGGFTDC LQ+
Subjt:  KKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQH

Query:  GASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLA------GLPQKVDIVTLDLSFISILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVR
        GA   Y VDVGY Q+A K+R+DERV VMERTN RY        G+P   +  T+D+SFIS+ L++P + +++   S  + LVKPQFE  R  VG  GIVR
Subjt:  GASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLA------GLPQKVDIVTLDLSFISILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVR

Query:  DPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFL
        DP VH +V++++I      G+  +G   SP+ G +GN EFL
Subjt:  DPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFL

P9WJ62 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA2.4e-3940.59Show/hide
Query:  LKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEIPK-YVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCL
        + ++ R+D   V R    SR      I  GKV +DG    K  T V D   + ++ +  + +V R   KL  A+E   + VAG+  LDAG STGGFT+ L
Subjt:  LKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEIPK-YVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCL

Query:  LQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLA--GLPQKVDIVTLDLSFISILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRD
        L  GA+ V   DVGYGQ+A  +R D RV V+ERTN R L    +  +VD+V  DLSFIS+  V+PA+V      + +V LVKPQFE  + QVG GG+V D
Subjt:  LQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLA--GLPQKVDIVTLDLSFISILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRD

Query:  PLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEF
        P +    V  + +  +  G+ S G   SP+ G  GN E+
Subjt:  PLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEF

P9WJ63 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA2.4e-3940.59Show/hide
Query:  LKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEIPK-YVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCL
        + ++ R+D   V R    SR      I  GKV +DG    K  T V D   + ++ +  + +V R   KL  A+E   + VAG+  LDAG STGGFT+ L
Subjt:  LKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEIPK-YVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCL

Query:  LQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLA--GLPQKVDIVTLDLSFISILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRD
        L  GA+ V   DVGYGQ+A  +R D RV V+ERTN R L    +  +VD+V  DLSFIS+  V+PA+V      + +V LVKPQFE  + QVG GG+V D
Subjt:  LQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLA--GLPQKVDIVTLDLSFISILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRD

Query:  PLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEF
        P +    V  + +  +  G+ S G   SP+ G  GN E+
Subjt:  PLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEF

Q06803 Hemolysin A1.9e-3939.92Show/hide
Query:  RLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGAS
        RLDE         SR+  Q  IL G V V+G  V+     + D   +E++  I KYV RAG KLE A  + G+ V  K+ LD G STGGFTDCLL+HGA 
Subjt:  RLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEIPKYVCRAGFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGAS

Query:  FVYGVDVGYGQVADKIRRDERVCVMERTNLRYL---AGLPQKVDIVTLDLSFISILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQ
         VY +DVG+ Q+  K+R D RV  +E  N + +       +   ++  D+SFISI  + P +   +      VTL+KPQFE  R  V  GGI+RD ++ +
Subjt:  FVYGVDVGYGQVADKIRRDERVCVMERTNLRYL---AGLPQKVDIVTLDLSFISILLVMPAVVSVMKETSTLVTLVKPQFECRRSQVGGGGIVRDPLVHQ

Query:  EVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACF
        +++   I  + + GF       SP+KGA+GN E+LA F
Subjt:  EVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACF

Q8DEV0 Ribosomal large subunit pseudouridine synthase D5.7e-0438.89Show/hide
Query:  RRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEI
        +RLD+   E +  +SR+ ++ W+L GKV VDG VV+K  T V     + ++AE+
Subjt:  RRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEI

Arabidopsis top hitse value%identityAlignment
AT3G25470.1 bacterial hemolysin-related2.3e-10169.4Show/hide
Query:  SSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEIPKYVCRAGFKLEAAIEQLGVDVAG
        S+ + F+ A  GK       KK+RLDE CVER+ +YSRT+IQSWI+QGKVLVDGR V KAG PV   A ++I AE+PK+VCR G KLEAA+E+L VDV+ 
Subjt:  SSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEIPKYVCRAGFKLEAAIEQLGVDVAG

Query:  KVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFISILLVMPAVVSVMKETSTLVTLVKPQF
        KV LDAGLSTGGFTDCLL++GA+ VYGVDVGYGQVADKIR D++V V+ERTNLRYL GLPQKVD+VTLDLSFISIL VMPA+++VMKE +TLVTLVKPQF
Subjt:  KVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFISILLVMPAVVSVMKETSTLVTLVKPQF

Query:  ECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSAD
        E RR QVG GGIVRDP VHQEV+EKII GV+ +GF ++G+IESP+KGA+GN EFLACF R T    A+
Subjt:  ECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGAGCTTCCTGAATCGTAACAATTGTGCAAGGATTTTTCTCTTATCGCCATTATCGTGCTCTCCGGCGCATGCTTCTTCTCCTAAAAGCTTTTCCATCGCCAA
GTCGGGAAAGATTCAGCCACTCAACCTGAAGAAGAAGAGGAGGTTGGATGAGATTTGCGTGGAAAGGTACCAGCAATACAGCCGAACAATTATACAATCGTGGATATTAC
AAGGCAAAGTGTTGGTAGATGGCAGAGTAGTCAGTAAAGCTGGAACACCTGTTGGGGATAAAGCTAAGGTTGAGATTATTGCTGAAATTCCGAAATATGTATGTAGAGCA
GGATTCAAGTTGGAAGCTGCCATTGAACAGTTGGGGGTTGATGTTGCTGGTAAAGTTGCTCTTGATGCTGGGTTATCCACTGGAGGATTTACTGACTGTTTGCTTCAGCA
TGGGGCTTCATTTGTCTACGGAGTTGATGTTGGCTATGGGCAGGTTGCTGATAAGATTCGCCGAGATGAACGTGTTTGTGTGATGGAAAGGACGAACTTAAGATATCTTG
CTGGACTTCCTCAAAAAGTTGATATTGTTACTCTGGACCTTTCTTTCATTTCTATTCTCTTGGTCATGCCTGCTGTCGTGAGTGTGATGAAGGAAACGTCAACATTGGTT
ACTTTGGTGAAACCTCAATTTGAATGTCGCAGATCACAAGTAGGAGGTGGGGGAATCGTGAGAGATCCACTAGTTCACCAGGAGGTTGTTGAGAAGATAATAAAAGGTGT
GAAGAATTTTGGATTCTGCAGCAGAGGTTGGATTGAATCACCAATGAAGGGGGCTGAGGGTAATACAGAATTCTTGGCTTGCTTTGAGAGGACAACTGCAGTTTCAAGTG
CAGATGCAGAT
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAGAGCTTCCTGAATCGTAACAATTGTGCAAGGATTTTTCTCTTATCGCCATTATCGTGCTCTCCGGCGCATGCTTCTTCTCCTAAAAGCTTTTCCATCGCCAA
GTCGGGAAAGATTCAGCCACTCAACCTGAAGAAGAAGAGGAGGTTGGATGAGATTTGCGTGGAAAGGTACCAGCAATACAGCCGAACAATTATACAATCGTGGATATTAC
AAGGCAAAGTGTTGGTAGATGGCAGAGTAGTCAGTAAAGCTGGAACACCTGTTGGGGATAAAGCTAAGGTTGAGATTATTGCTGAAATTCCGAAATATGTATGTAGAGCA
GGATTCAAGTTGGAAGCTGCCATTGAACAGTTGGGGGTTGATGTTGCTGGTAAAGTTGCTCTTGATGCTGGGTTATCCACTGGAGGATTTACTGACTGTTTGCTTCAGCA
TGGGGCTTCATTTGTCTACGGAGTTGATGTTGGCTATGGGCAGGTTGCTGATAAGATTCGCCGAGATGAACGTGTTTGTGTGATGGAAAGGACGAACTTAAGATATCTTG
CTGGACTTCCTCAAAAAGTTGATATTGTTACTCTGGACCTTTCTTTCATTTCTATTCTCTTGGTCATGCCTGCTGTCGTGAGTGTGATGAAGGAAACGTCAACATTGGTT
ACTTTGGTGAAACCTCAATTTGAATGTCGCAGATCACAAGTAGGAGGTGGGGGAATCGTGAGAGATCCACTAGTTCACCAGGAGGTTGTTGAGAAGATAATAAAAGGTGT
GAAGAATTTTGGATTCTGCAGCAGAGGTTGGATTGAATCACCAATGAAGGGGGCTGAGGGTAATACAGAATTCTTGGCTTGCTTTGAGAGGACAACTGCAGTTTCAAGTG
CAGATGCAGAT
Protein sequenceShow/hide protein sequence
MSKSFLNRNNCARIFLLSPLSCSPAHASSPKSFSIAKSGKIQPLNLKKKRRLDEICVERYQQYSRTIIQSWILQGKVLVDGRVVSKAGTPVGDKAKVEIIAEIPKYVCRA
GFKLEAAIEQLGVDVAGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFISILLVMPAVVSVMKETSTLV
TLVKPQFECRRSQVGGGGIVRDPLVHQEVVEKIIKGVKNFGFCSRGWIESPMKGAEGNTEFLACFERTTAVSSADAD