; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004790 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004790
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold176:463466..463720
RNA-Seq ExpressionMS004790
SyntenyMS004790
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD6257659.1 unnamed protein product [Miscanthus lutarioriparius]2.0e-1544.58Show/hide
Query:  RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDC
        R  A+ IG+ VG+F  +D D  +L  G  LR+++ +D+RKP  RG+   +G    +RW PITYE  P+FCY+CGL  HV + C
Subjt:  RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDC

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.0e-1540.48Show/hide
Query:  RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDCE
        + +A  +GN +G F ++DC++    WG +LR+++ ID+ KP RRG+ I +       W PI YE+LP+FCY CG+  H   DC+
Subjt:  RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDCE

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]5.7e-1540.48Show/hide
Query:  RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDCE
        + + +++GN VG+F +MD +D  + WG T+R+++ IDVRKP RRG+ + +   AD  W    YE+LP +CY CG   H  ++C+
Subjt:  RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDCE

XP_039815364.1 uncharacterized protein LOC120678302 [Panicum virgatum]1.4e-1649.4Show/hide
Query:  RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDC
        + +A  IG  +G+F  +D ++DE   G  LRV++ I++ KP RRG+ I VG  A ERW PITYE LP+FCYVCG   H  K C
Subjt:  RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDC

XP_039827601.1 uncharacterized protein LOC120689378 [Panicum virgatum]8.9e-1648.19Show/hide
Query:  RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDC
        + +A  IG  +G+F  +D ++D    G  LRV++ I++ KP RRG+ I VG  A ERW PITYE LP+FCYVCG   H  K C
Subjt:  RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDC

TrEMBL top hitse value%identityAlignment
A0A6J1DU55 uncharacterized protein LOC1110231359.6e-1640.48Show/hide
Query:  RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDCE
        + +A  +GN +G F ++DC++    WG +LR+++ ID+ KP RRG+ I +       W PI YE+LP+FCY CG+  H   DC+
Subjt:  RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDCE

A0A6P9EID8 uncharacterized protein LOC1183488563.6e-1541.98Show/hide
Query:  KVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDCEV
        ++IGN +G  E +D +  E+ WGE LR+++ +++ +P  RG+ +K+G      W    YE+LPNFCY+CG   H QKDCE+
Subjt:  KVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDCEV

A0A803NKW5 Uncharacterized protein3.6e-1544.44Show/hide
Query:  IAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDC
        +AK+IGNL+G++  +  D     WG  LR+Q+ +DV KP  RG  + + +M DE W    YE+LPNFCY CG+  HV  +C
Subjt:  IAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDC

K3ZNG2 CCHC-type domain-containing protein3.3e-1647.5Show/hide
Query:  AKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDC
        A+VIG+  GKF  +D + D+L  G  LRV++ +D+R P RRG+ + +G    +RW P+ YE LP FCYVCG+  HV K C
Subjt:  AKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDC

K4AML8 CCHC-type domain-containing protein1.2e-1546.25Show/hide
Query:  AKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDC
        A+VIG+  GKF  +D + D+L  G  LRV++ +D+R P RRG+ + +G    +RW P+ YE LP FCYVCG+  H  K C
Subjt:  AKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAAATATAGCTAAGGTCATTGGGAATTTAGTCGGGAAGTTTGAGAACATGGATTGTGACGATGATGAGCTATGTTGGGGTGAAACACTCCGAGTCCAGATATATATTGA
TGTGAGGAAACCGTTTCGACGAGGAGTCTTCATCAAAGTCGGTTTTATGGCCGACGAGAGATGGTTTCCAATTACATATGAAAAATTACCGAACTTTTGTTATGTATGTG
GGTTGTTTGACCATGTCCAGAAAGATTGTGAGGTT
mRNA sequenceShow/hide mRNA sequence
AGAAATATAGCTAAGGTCATTGGGAATTTAGTCGGGAAGTTTGAGAACATGGATTGTGACGATGATGAGCTATGTTGGGGTGAAACACTCCGAGTCCAGATATATATTGA
TGTGAGGAAACCGTTTCGACGAGGAGTCTTCATCAAAGTCGGTTTTATGGCCGACGAGAGATGGTTTCCAATTACATATGAAAAATTACCGAACTTTTGTTATGTATGTG
GGTTGTTTGACCATGTCCAGAAAGATTGTGAGGTT
Protein sequenceShow/hide protein sequence
RNIAKVIGNLVGKFENMDCDDDELCWGETLRVQIYIDVRKPFRRGVFIKVGFMADERWFPITYEKLPNFCYVCGLFDHVQKDCEV