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MS004822 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004822
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationscaffold176:812729..812911
RNA-Seq ExpressionMS004822
SyntenyMS004822
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0010375 - stomatal complex patterning (biological process)
GO:2000122 - negative regulation of stomatal complex development (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5224840.1 Membrane lipoprotein [Salix suchowensis]3.6e-1975.41Show/hide
Query:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        RRG+TV+IAGSRLPDCS ACG CSPCRLVMV +IC A++E++ETCP AYKCMC  KS+PVP
Subjt:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
KAG6738026.1 hypothetical protein POTOM_059562 [Populus tomentosa]6.2e-1975.41Show/hide
Query:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        RRG+TV+IAGS LPDCSHACG CSPCRLVMV +IC A++E++ETCP AYKCMC  KS+PVP
Subjt:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
KAG7034925.1 Protein EPIDERMAL PATTERNING FACTOR 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-2181.67Show/hide
Query:  RGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        RGETV++AGSRLPDCSHACG C+PCRLVMVRY C ++VEDSETCP AYKCMC+ KSFPVP
Subjt:  RGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
NP_179684.1 epidermal patterning factor 1 [Arabidopsis thaliana]4.7e-1973.77Show/hide
Query:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        RR +TV++AGSRLPDCSHACG CSPCRLVMV ++C A+VE++ETCP AYKCMC  KS+PVP
Subjt:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
XP_022140689.1 protein EPIDERMAL PATTERNING FACTOR 1-like [Momordica charantia]7.7e-30100Show/hide
Query:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
Subjt:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
TrEMBL top hitse value%identityAlignment
A0A178VX97 Epidermal patterning factor-like protein2.3e-1973.77Show/hide
Query:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        RR +TV++AGSRLPDCSHACG CSPCRLVMV ++C A+VE++ETCP AYKCMC  KS+PVP
Subjt:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
A0A6D2HH05 Epidermal patterning factor-like protein3.0e-1972.13Show/hide
Query:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        RR +TV++AGSRLPDCSHACG CSPCRLVMV ++C A++E++ETCP AYKCMC  KS+PVP
Subjt:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
A0A6J1CGD5 Epidermal patterning factor-like protein3.7e-30100Show/hide
Query:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
Subjt:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
A0A6M2EHS9 Epidermal patterning factor-like protein3.0e-1975.41Show/hide
Query:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        RRG+TV+IAGS LPDCSHACG CSPCRLVMV +IC A++E++ETCP AYKCMC  KS+PVP
Subjt:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
B9N2A9 Epidermal patterning factor-like protein3.0e-1975.41Show/hide
Query:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        RRG+TV+IAGS LPDCSHACG CSPCRLVMV +IC A++E++ETCP AYKCMC  KS+PVP
Subjt:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
SwissProt top hitse value%identityAlignment
C4B8C5 EPIDERMAL PATTERNING FACTOR-like protein 72.4e-1050.91Show/hide
Query:  KIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        K +GS +PDCS+ACG C PC+LV++   C A    SE CP  YKC+C  K + VP
Subjt:  KIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
Q8LC53 Protein EPIDERMAL PATTERNING FACTOR 23.0e-0848.08Show/hide
Query:  GSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        GS LPDCS+ACG CSPC+ VM+ + C  A    E+C   Y+C C  + + VP
Subjt:  GSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
Q8S8I4 Protein EPIDERMAL PATTERNING FACTOR 16.2e-2273.77Show/hide
Query:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        RR +TV++AGSRLPDCSHACG CSPCRLVMV ++C A+VE++ETCP AYKCMC  KS+PVP
Subjt:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
Arabidopsis top hitse value%identityAlignment
AT1G34245.1 Putative membrane lipoprotein2.1e-0948.08Show/hide
Query:  GSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        GS LPDCS+ACG CSPC+ VM+ + C  A    E+C   Y+C C  + + VP
Subjt:  GSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
AT1G71866.1 LOCATED IN: endomembrane system1.7e-1150.91Show/hide
Query:  KIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        K +GS +PDCS+ACG C PC+LV++   C A    SE CP  YKC+C  K + VP
Subjt:  KIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
AT2G20875.1 epidermal patterning factor 14.4e-2373.77Show/hide
Query:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP
        RR +TV++AGSRLPDCSHACG CSPCRLVMV ++C A+VE++ETCP AYKCMC  KS+PVP
Subjt:  RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGAGAGGCGAGACAGTGAAAATTGCAGGGTCGAGGTTACCAGATTGCTCACACGCTTGTGGGTGGTGCTCGCCATGCAGATTAGTGATGGTTAGGTACATTTGTGGTGC
TGCAGTGGAAGATTCAGAGACGTGTCCAACGGCTTACAAGTGCATGTGCACCTTTAAATCCTTCCCTGTTCCA
mRNA sequenceShow/hide mRNA sequence
AGGAGAGGCGAGACAGTGAAAATTGCAGGGTCGAGGTTACCAGATTGCTCACACGCTTGTGGGTGGTGCTCGCCATGCAGATTAGTGATGGTTAGGTACATTTGTGGTGC
TGCAGTGGAAGATTCAGAGACGTGTCCAACGGCTTACAAGTGCATGTGCACCTTTAAATCCTTCCCTGTTCCA
Protein sequenceShow/hide protein sequence
RRGETVKIAGSRLPDCSHACGWCSPCRLVMVRYICGAAVEDSETCPTAYKCMCTFKSFPVP