CuGenDBv2

Gene ID	MS004837
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	SYP124 protein
Genome location	scaffold176:895241..897078
RNA-Seq Expression	MS004837
Synteny	MS004837
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7010698.1 hypothetical protein SDJN02_27494 [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-40

94.44

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Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE
        MATLAAAA RQARALTRVSSPQS ATLI RRGLAGAADHHGPPKVNCW DPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKK+E
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE

XP_022140380.1 uncharacterized protein LOC111011068 [Momordica charantia]

1.8e-43

100

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Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE
        MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE

XP_022944460.1 uncharacterized protein LOC111448907 [Cucurbita moschata]

9.3e-40

93.33

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Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE
        MATLAAAA RQARALTRVSSPQS ATLI RRGLAGAADHHGPPKVNCW DPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFT GKGKK+E
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE

XP_023532872.1 uncharacterized protein LOC111794912 [Cucurbita pepo subsp. pepo]

1.4e-40

94.44

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Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE
        MATLAAAAVRQARALTRVSSPQSTATLI RRGLAGAADHHGPPKVNCW+DPMSPSKWKEEHFVIVSLSGWGLLF+GGYKFFT GKGKK+E
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE

XP_038900519.1 uncharacterized protein LOC120087716 [Benincasa hispida]

1.0e-41

96.67

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Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE
        MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHG PKVNCW+DPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKK+E
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BJS2 uncharacterized protein LOC103490467

1.3e-39

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Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE
        MATLAAAAVRQARAL RVSSPQSTA LIH+RGLAGAADHHGPPKVNCW+DPMSPSKWKEEHFV+VSLSGWG+L FGGYKFFTRGKG K+E
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE

A0A5A7U364 Uncharacterized protein

5.9e-40

91.11

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Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE
        MATLAAAAVRQARAL RVSSPQSTA LIH+RGLAGAADHHGPPKVNCW+DPMSPSKWKEEHFV+VSLSGWGLL FGGYKFFTRGKG K+E
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE

A0A6J1CEY6 uncharacterized protein LOC111011068

8.8e-44

100

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Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE
        MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE

A0A6J1FYP0 uncharacterized protein LOC111448907

4.5e-40

93.33

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Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE
        MATLAAAA RQARALTRVSSPQS ATLI RRGLAGAADHHGPPKVNCW DPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFT GKGKK+E
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE

A0A6J1I3K1 uncharacterized protein LOC111469597

5.9e-40

92.22

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Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE
        MATLAA AVRQARALTR SSPQSTATLI RRGLAGAADHHGPPKVNCW+DPMSPSKWKEEHFVIVSLSGWGLLF+GGYKFFT GKGKK+E
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G20820.1 unknown protein

1.5e-19

54.22

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Query:  AAAVRQARALTRVSSPQ---STATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGK
        A+  R+A +L ++ S +     A++  RR LAGAADHHG  KV+ WK P +P  WKEEHFV++SLSGWGLLF+ GYK  T GK
Subjt:  AAAVRQARALTRVSSPQ---STATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGK

AT2G20820.2 unknown protein

5.3e-09

45.9

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Query:  AAAVRQARALTRVSSPQ---STATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFV
        A+  R+A +L ++ S +     A++  RR LAGAADHHG  KV+ WK P +P  WKEEH++
Subjt:  AAAVRQARALTRVSSPQ---STATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFV

Sequences

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CDS sequence

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ATGGCTACCTTAGCGGCTGCTGCAGTTCGTCAAGCCAGAGCCCTAACTCGAGTCTCCTCTCCTCAATCAACCGCGACCCTTATTCACCGCCGCGGTCTCGCTGGCGCTGC
TGACCACCATGGACCACCGAAGGTTAACTGTTGGAAAGATCCTATGAGCCCATCTAAATGGAAGGAAGAGCATTTTGTGATTGTCTCTCTATCGGGATGGGGCCTACTCT
TCTTTGGAGGGTACAAGTTCTTTACCAGGGGCAAAGGAAAGAAGGAAGAG

mRNA sequence

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Protein sequence

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MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKEE

MS004837 (gene) of Bitter gourd (TR) v1 genome