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MS004850 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004850
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor MYB30-like
Genome locationscaffold176:960816..961378
RNA-Seq ExpressionMS004850
SyntenyMS004850
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059063.1 transcription repressor MYB6-like [Cucumis melo var. makuwa]6.8e-5988.79Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        MVRAPVVD++G+KRGAWSLEED KL AY+EKYGPWKWR+VP LAGL RCGKSCRLRWLNYLRPG+KRGNYTNEEN+LICKLH+KYGNRWSTIAAKLPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNEVKNHWNAHL+KQV
Subjt:  DNEVKNHWNAHLKKQV

TYK04689.1 transcription repressor MYB6-like [Cucumis melo var. makuwa]3.0e-5989.66Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        MVRAPVVD++G+KRGAWSLEED KL AY+EKYGPWKWR+VP LAGL RCGKSCRLRWLNYLRPG+KRGNYTNEEN+LICKLH+KYGNRWSTIAAKLPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNEVKNHWNAHLKKQV
Subjt:  DNEVKNHWNAHLKKQV

XP_004140052.2 transcription factor MYB10 [Cucumis sativus]5.7e-5887.93Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        MVRAPVVD++G+KRGAWSLEED KL AY+EKYGPWKWR+VPRLAGL RCGKSCRLRWLNYLRPG+KRGNYTNEEN+LICKLH+ +GNRWSTIAAKLPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNEVKN+WNAHLKKQV
Subjt:  DNEVKNHWNAHLKKQV

XP_008448223.1 PREDICTED: transcription repressor MYB6-like [Cucumis melo]3.0e-5989.66Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        MVRAPVVD++G+KRGAWSLEED KL AY+EKYGPWKWR+VP LAGL RCGKSCRLRWLNYLRPG+KRGNYTNEEN+LICKLH+KYGNRWSTIAAKLPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNEVKNHWNAHLKKQV
Subjt:  DNEVKNHWNAHLKKQV

XP_022140615.1 transcription factor MYB30-like [Momordica charantia]3.7e-65100Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNEVKNHWNAHLKKQV
Subjt:  DNEVKNHWNAHLKKQV

TrEMBL top hitse value%identityAlignment
A0A0A0KAD1 Uncharacterized protein2.8e-5887.93Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        MVRAPVVD++G+KRGAWSLEED KL AY+EKYGPWKWR+VPRLAGL RCGKSCRLRWLNYLRPG+KRGNYTNEEN+LICKLH+ +GNRWSTIAAKLPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNEVKN+WNAHLKKQV
Subjt:  DNEVKNHWNAHLKKQV

A0A1S3BIL1 transcription repressor MYB6-like1.5e-5989.66Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        MVRAPVVD++G+KRGAWSLEED KL AY+EKYGPWKWR+VP LAGL RCGKSCRLRWLNYLRPG+KRGNYTNEEN+LICKLH+KYGNRWSTIAAKLPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNEVKNHWNAHLKKQV
Subjt:  DNEVKNHWNAHLKKQV

A0A5A7USZ0 Transcription repressor MYB6-like3.3e-5988.79Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        MVRAPVVD++G+KRGAWSLEED KL AY+EKYGPWKWR+VP LAGL RCGKSCRLRWLNYLRPG+KRGNYTNEEN+LICKLH+KYGNRWSTIAAKLPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNEVKNHWNAHL+KQV
Subjt:  DNEVKNHWNAHLKKQV

A0A5D3C2S1 Transcription repressor MYB6-like1.5e-5989.66Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        MVRAPVVD++G+KRGAWSLEED KL AY+EKYGPWKWR+VP LAGL RCGKSCRLRWLNYLRPG+KRGNYTNEEN+LICKLH+KYGNRWSTIAAKLPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNEVKNHWNAHLKKQV
Subjt:  DNEVKNHWNAHLKKQV

A0A6J1CFK4 transcription factor MYB30-like1.8e-65100Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNEVKNHWNAHLKKQV
Subjt:  DNEVKNHWNAHLKKQV

SwissProt top hitse value%identityAlignment
Q42379 Transcription factor MYB73.3e-4056.9Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        M R+P  ++  + +GAW+ EED +L +Y++ +G   WR +PR AGL RCGKSCRLRW+NYLRP +KRGN+T++E++LI KLH   GN+WS IAA+LPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNE+KN+WN H+K+++
Subjt:  DNEVKNHWNAHLKKQV

Q6K1S6 Transcription factor MYB302.3e-4163.79Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        M RAP  ++ GLKRG W+ EED  L A++E++G   WR +PR AGL RCGKSCRLRW+NYLRP IKRGN+T EE D I  LH+  GNRWS IAA+LPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNE+KN W+ HLKK++
Subjt:  DNEVKNHWNAHLKKQV

Q6R0A6 Transcription factor MYB631.9e-4060.53Show/hide
Query:  RAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRTDN
        RAP  D+  +KRG WS EED KL ++++K+G   WR +P+ +GL RCGKSCRLRW+NYLRP +KRGN+T+EE + I KLH  YGN+WS IA++LPGRTDN
Subjt:  RAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRTDN

Query:  EVKNHWNAHLKKQV
        E+KN W+ HLKK++
Subjt:  EVKNHWNAHLKKQV

Q9LTV4 Transcription factor MYB102.5e-4061.4Show/hide
Query:  RAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRTDN
        RAP  D++ +KRG WS EE  +L +++ K G   WR +P+LAGL RCGKSCRLRW+NYLRPG+KRGN+T EE D I  LH+ YGN+WS IA+  PGRTDN
Subjt:  RAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRTDN

Query:  EVKNHWNAHLKKQV
        E+KN WN HLKK++
Subjt:  EVKNHWNAHLKKQV

Q9M0J5 Transcription factor MYB411.9e-4059.48Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        M R+P  D+NG+K+G W+ EED KL  Y+  +GP  WR +P+ AGL RCGKSCRLRW NYLRP IKRG ++ EE + I +LH   GN+WS IAA+LPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNE+KNHWN H++K++
Subjt:  DNEVKNHWNAHLKKQV

Arabidopsis top hitse value%identityAlignment
AT1G79180.1 myb domain protein 631.4e-4160.53Show/hide
Query:  RAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRTDN
        RAP  D+  +KRG WS EED KL ++++K+G   WR +P+ +GL RCGKSCRLRW+NYLRP +KRGN+T+EE + I KLH  YGN+WS IA++LPGRTDN
Subjt:  RAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRTDN

Query:  EVKNHWNAHLKKQV
        E+KN W+ HLKK++
Subjt:  EVKNHWNAHLKKQV

AT3G12820.1 myb domain protein 101.8e-4161.4Show/hide
Query:  RAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRTDN
        RAP  D++ +KRG WS EE  +L +++ K G   WR +P+LAGL RCGKSCRLRW+NYLRPG+KRGN+T EE D I  LH+ YGN+WS IA+  PGRTDN
Subjt:  RAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRTDN

Query:  EVKNHWNAHLKKQV
        E+KN WN HLKK++
Subjt:  EVKNHWNAHLKKQV

AT4G28110.1 myb domain protein 411.4e-4159.48Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        M R+P  D+NG+K+G W+ EED KL  Y+  +GP  WR +P+ AGL RCGKSCRLRW NYLRP IKRG ++ EE + I +LH   GN+WS IAA+LPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNE+KNHWN H++K++
Subjt:  DNEVKNHWNAHLKKQV

AT5G16770.1 myb domain protein 93.6e-4261.21Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        M R+P  DENGLK+G W+ EED KL  +++K+G   WR +P+ AGL RCGKSCRLRW NYLRP IKRGN+T EE   I  LH   GN+WS+IA  LPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNE+KN+WN HL+K++
Subjt:  DNEVKNHWNAHLKKQV

AT5G16770.2 myb domain protein 93.6e-4261.21Show/hide
Query:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT
        M R+P  DENGLK+G W+ EED KL  +++K+G   WR +P+ AGL RCGKSCRLRW NYLRP IKRGN+T EE   I  LH   GN+WS+IA  LPGRT
Subjt:  MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRT

Query:  DNEVKNHWNAHLKKQV
        DNE+KN+WN HL+K++
Subjt:  DNEVKNHWNAHLKKQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCGAGCGCCTGTGGTTGATGAGAATGGATTGAAGAGAGGCGCGTGGAGTTTAGAAGAAGACCATAAGCTCACAGCTTATGTTGAAAAATATGGCCCTTGGAAATG
GCGGCAGGTCCCCAGGCTTGCAGGGTTGACGAGATGTGGCAAAAGTTGTAGATTGCGGTGGCTGAACTATCTCCGCCCTGGTATTAAACGAGGGAATTACACAAACGAAG
AGAACGATTTAATCTGCAAATTGCATGAGAAATATGGCAATAGATGGTCGACGATCGCTGCAAAGTTACCAGGGAGAACAGACAACGAAGTGAAGAATCATTGGAACGCT
CACCTAAAGAAACAAGTG
mRNA sequenceShow/hide mRNA sequence
ATGGTGCGAGCGCCTGTGGTTGATGAGAATGGATTGAAGAGAGGCGCGTGGAGTTTAGAAGAAGACCATAAGCTCACAGCTTATGTTGAAAAATATGGCCCTTGGAAATG
GCGGCAGGTCCCCAGGCTTGCAGGGTTGACGAGATGTGGCAAAAGTTGTAGATTGCGGTGGCTGAACTATCTCCGCCCTGGTATTAAACGAGGGAATTACACAAACGAAG
AGAACGATTTAATCTGCAAATTGCATGAGAAATATGGCAATAGATGGTCGACGATCGCTGCAAAGTTACCAGGGAGAACAGACAACGAAGTGAAGAATCATTGGAACGCT
CACCTAAAGAAACAAGTG
Protein sequenceShow/hide protein sequence
MVRAPVVDENGLKRGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYLRPGIKRGNYTNEENDLICKLHEKYGNRWSTIAAKLPGRTDNEVKNHWNA
HLKKQV