; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004854 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004854
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalcium-binding EF-hand protein
Genome locationscaffold176:985510..985845
RNA-Seq ExpressionMS004854
SyntenyMS004854
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570861.1 Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4283.48Show/hide
Query:  MARK---GGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLM
        MARK   GG F DLLPVMAEKLGGEGLI ELCNGFQ+LMDKEKGVITLESLRRNSSLLGL +M E+EL SMMREGDLD DGALNQMEFCVLMFRLSP+LM
Subjt:  MARK---GGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLM

Query:  EHSLYLLQHALEDEF
        E SLY L  ALE EF
Subjt:  EHSLYLLQHALEDEF

XP_004140055.1 calcium-binding protein KRP1 [Cucumis sativus]6.6e-4383.19Show/hide
Query:  MARKGG-HFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEH
        M++KGG +F DLLPVMAEKLGGEGLIKELCNGF++LMDKEKGVITLESLRRNS LLG+ +MAE+EL SMMREGDLD DGALNQMEFCVLMFRLSP LM+H
Subjt:  MARKGG-HFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEH

Query:  SLYLLQHALEDEF
        SLY LQ ALE+EF
Subjt:  SLYLLQHALEDEF

XP_022944617.1 calcium-binding protein PBP1-like [Cucurbita moschata]4.3e-4281.36Show/hide
Query:  MARK------GGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSP
        MARK      GG F DLLPVMAEKLGGEGLI ELCNGFQ+LMDKEKGVITLESLRRNSSLLGL +M E+EL SMMREGDLD DGALNQMEFCVLMFRLSP
Subjt:  MARK------GGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSP

Query:  QLMEHSLYLLQHALEDEF
        +LME SLY L  ALE EF
Subjt:  QLMEHSLYLLQHALEDEF

XP_022986403.1 calcium-binding protein PBP1-like [Cucurbita maxima]5.6e-4280.67Show/hide
Query:  MARK-------GGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLS
        MARK       GG F DLLPVMAEKLGGEGLI ELCNGFQ+LMDKEKGVITLESLRRNSSLLGL +M E+EL SMMREGDLD DGALNQMEFCVLMFRLS
Subjt:  MARK-------GGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLS

Query:  PQLMEHSLYLLQHALEDEF
        P+LME SLY L  ALE EF
Subjt:  PQLMEHSLYLLQHALEDEF

XP_023512862.1 calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo]9.5e-4282.61Show/hide
Query:  MARK---GGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLM
        MARK   GG F DLLPVMAEKLGGEGLI ELCNGFQ+LMDKEKGVITLESLR NSSLLGL +M E+EL SMMREGDLD DGALNQMEFCVLMFRLSP+LM
Subjt:  MARK---GGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLM

Query:  EHSLYLLQHALEDEF
        E SLY L  ALE EF
Subjt:  EHSLYLLQHALEDEF

TrEMBL top hitse value%identityAlignment
A0A0A0KCV2 EF-hand domain-containing protein3.2e-4383.19Show/hide
Query:  MARKGG-HFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEH
        M++KGG +F DLLPVMAEKLGGEGLIKELCNGF++LMDKEKGVITLESLRRNS LLG+ +MAE+EL SMMREGDLD DGALNQMEFCVLMFRLSP LM+H
Subjt:  MARKGG-HFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEH

Query:  SLYLLQHALEDEF
        SLY LQ ALE+EF
Subjt:  SLYLLQHALEDEF

A0A6J1FW37 calcium-binding protein PBP1-like2.1e-4281.36Show/hide
Query:  MARK------GGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSP
        MARK      GG F DLLPVMAEKLGGEGLI ELCNGFQ+LMDKEKGVITLESLRRNSSLLGL +M E+EL SMMREGDLD DGALNQMEFCVLMFRLSP
Subjt:  MARK------GGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSP

Query:  QLMEHSLYLLQHALEDEF
        +LME SLY L  ALE EF
Subjt:  QLMEHSLYLLQHALEDEF

A0A6J1G6H5 calcium-binding protein PBP1-like1.9e-4080.18Show/hide
Query:  MARKGGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHS
        MARK   F DLLPVMAE+LGGEGLI ELCNGFQLLMDKEKGVITL+SLR NSSLLGL +M E EL SMM EGDLD DGALNQMEFCVLMFRLSP+LMEHS
Subjt:  MARKGGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHS

Query:  LYLLQHALEDE
        L  LQHA  ++
Subjt:  LYLLQHALEDE

A0A6J1HZZ8 calcium-binding protein PBP1-like3.0e-4180.36Show/hide
Query:  MARKGGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHS
        MARK   F DLLPVMAE+LGGEGLI ELCNGFQLLMDKEKGVITL+SLR NSSLLGL +M E EL SMM EGDLD DGALNQMEFCVLMFRLSP+LM+HS
Subjt:  MARKGGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHS

Query:  LYLLQHALEDEF
        LY LQHA   +F
Subjt:  LYLLQHALEDEF

A0A6J1JGE3 calcium-binding protein PBP1-like2.7e-4280.67Show/hide
Query:  MARK-------GGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLS
        MARK       GG F DLLPVMAEKLGGEGLI ELCNGFQ+LMDKEKGVITLESLRRNSSLLGL +M E+EL SMMREGDLD DGALNQMEFCVLMFRLS
Subjt:  MARK-------GGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLS

Query:  PQLMEHSLYLLQHALEDEF
        P+LME SLY L  ALE EF
Subjt:  PQLMEHSLYLLQHALEDEF

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP13.2e-3264.49Show/hide
Query:  HFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRN-SSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQ
        +F D LP MA  LGGEGLI ELCNGF+LLMD+EKGVIT ESLRRN +++LGL ++ ++++  M++EGD D DGALNQMEFCVLMFRLSP LME S  L+ 
Subjt:  HFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRN-SSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQ

Query:  HALEDEF
          +E+EF
Subjt:  HALEDEF

Q2TBN3 Centrin-24.2e-0835.63Show/hide
Query:  HFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLS
        +F D L VM +K+  +   +E+   F+L  D E G I+ ++L+R +  LG  N++++EL  M+ E D D DG +N+ EF  +M + S
Subjt:  HFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLS

Q9LSQ6 Calcium-binding protein PBP17.1e-3264.15Show/hide
Query:  FLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRN-SSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQH
        F D  P MA KLGGEGLI+E+C GF+LLMDK+KGVIT ESLRRN S++LGL ++ +D++  M+ EGD D DGALNQMEFCVLMFRLSP+LME S  ++  
Subjt:  FLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRN-SSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQH

Query:  ALEDEF
         +E+EF
Subjt:  ALEDEF

Q9R1K9 Centrin-25.5e-0835.63Show/hide
Query:  HFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLS
        +F D L VM +K+  +   +E+   F+L  D E G I+ ++L+R +  LG  N+ ++EL  M+ E D D DG +N+ EF  +M + S
Subjt:  HFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLS

Q9ZPX9 Calcium-binding protein KIC2.0e-2657.84Show/hide
Query:  DLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQHALE
        D+LPVMAEK+  E  + ELC GF LL D E+ +IT ESLRRNS +LG+  M++++   M+REGDLD DGALNQ EFCVLM RLSP++ME +   L+ AL 
Subjt:  DLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQHALE

Query:  DE
         E
Subjt:  DE

Arabidopsis top hitse value%identityAlignment
AT1G66410.1 calmodulin 43.4e-0531.71Show/hide
Query:  FLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLM
        F + L +MA+K+      +EL   F++    + G I+   LR   + LG   + ++E+  M+RE D+D DG +N  EF  +M
Subjt:  FLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLM

AT1G66410.2 calmodulin 43.4e-0531.71Show/hide
Query:  FLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLM
        F + L +MA+K+      +EL   F++    + G I+   LR   + LG   + ++E+  M+RE D+D DG +N  EF  +M
Subjt:  FLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLM

AT2G46600.1 Calcium-binding EF-hand family protein1.4e-2757.84Show/hide
Query:  DLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQHALE
        D+LPVMAEK+  E  + ELC GF LL D E+ +IT ESLRRNS +LG+  M++++   M+REGDLD DGALNQ EFCVLM RLSP++ME +   L+ AL 
Subjt:  DLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQHALE

Query:  DE
         E
Subjt:  DE

AT4G27280.1 Calcium-binding EF-hand family protein2.3e-3364.49Show/hide
Query:  HFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRN-SSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQ
        +F D LP MA  LGGEGLI ELCNGF+LLMD+EKGVIT ESLRRN +++LGL ++ ++++  M++EGD D DGALNQMEFCVLMFRLSP LME S  L+ 
Subjt:  HFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRN-SSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQ

Query:  HALEDEF
          +E+EF
Subjt:  HALEDEF

AT5G54490.1 pinoid-binding protein 15.0e-3364.15Show/hide
Query:  FLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRN-SSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQH
        F D  P MA KLGGEGLI+E+C GF+LLMDK+KGVIT ESLRRN S++LGL ++ +D++  M+ EGD D DGALNQMEFCVLMFRLSP+LME S  ++  
Subjt:  FLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRN-SSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQH

Query:  ALEDEF
         +E+EF
Subjt:  ALEDEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACGAAAGGGTGGCCATTTCCTTGATTTACTACCTGTAATGGCCGAGAAACTGGGGGGAGAGGGGCTGATAAAGGAGCTGTGCAATGGGTTTCAGTTGCTGATGGA
CAAAGAGAAGGGGGTGATCACGCTGGAGAGCCTGAGGAGGAACTCTTCGCTGCTGGGTCTGCACAACATGGCAGAGGACGAGCTGGCCAGCATGATGAGGGAGGGCGACC
TCGACGCCGACGGTGCCTTGAACCAGATGGAGTTTTGCGTTTTGATGTTCAGATTAAGCCCTCAGTTAATGGAACACTCTCTGTATTTGCTGCAGCACGCTTTAGAAGAC
GAGTTT
mRNA sequenceShow/hide mRNA sequence
ATGGCACGAAAGGGTGGCCATTTCCTTGATTTACTACCTGTAATGGCCGAGAAACTGGGGGGAGAGGGGCTGATAAAGGAGCTGTGCAATGGGTTTCAGTTGCTGATGGA
CAAAGAGAAGGGGGTGATCACGCTGGAGAGCCTGAGGAGGAACTCTTCGCTGCTGGGTCTGCACAACATGGCAGAGGACGAGCTGGCCAGCATGATGAGGGAGGGCGACC
TCGACGCCGACGGTGCCTTGAACCAGATGGAGTTTTGCGTTTTGATGTTCAGATTAAGCCCTCAGTTAATGGAACACTCTCTGTATTTGCTGCAGCACGCTTTAGAAGAC
GAGTTT
Protein sequenceShow/hide protein sequence
MARKGGHFLDLLPVMAEKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNSSLLGLHNMAEDELASMMREGDLDADGALNQMEFCVLMFRLSPQLMEHSLYLLQHALED
EF