; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004859 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004859
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold176:1054612..1054920
RNA-Seq ExpressionMS004859
SyntenyMS004859
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1352Show/hide
Query:  VVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKEEEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN
        + ++ LLCLILA + LIQ  A+      +  +A P          E   +AEAPEIRRLG+HH   S+AGGGV+IGGL TAVFA VFCYIRVTRK + V+
Subjt:  VVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKEEEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN
KAG7034949.1 hypothetical protein SDJN02_01742 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2773.33Show/hide
Query:  NMAVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKE---EEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTR
        NMAVVR GLLCL+L GM L Q TAA TAEAP VA A P+F   IGKE   E Q  VA  PEIRRLG+HH HTSMAGGGVL+GGLATAVFAVVFCYIRVTR
Subjt:  NMAVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKE---EEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTR

Query:  KPNAV
        K + V
Subjt:  KPNAV
KGN46704.1 hypothetical protein Csa_020980 [Cucumis sativus]1.7e-2469.9Show/hide
Query:  AVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKEE--EQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPN
        AVVRL L+ LILAGM  IQ TAA+  EAP V  A  +F + IGKEE  +  VVAE P IRRLG+HHFHTS+AGG VLIG LATAVFA+VFCYIRVTRKPN
Subjt:  AVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKEE--EQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPN

Query:  AVN
         VN
Subjt:  AVN
XP_022947872.1 uncharacterized protein LOC111451632 [Cucurbita moschata]7.9e-2773.08Show/hide
Query:  MAVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKE---EEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        MAVVR GLLCL+L GM L Q TAA TAEAP VA A P+F   IGKE   E Q  VA  PEIRRLG+HH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRK
Subjt:  MAVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKE---EEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK

Query:  PNAV
         + V
Subjt:  PNAV
XP_023532519.1 uncharacterized protein LOC111794654 [Cucurbita pepo subsp. pepo]1.3e-2974.29Show/hide
Query:  NMAVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKE---EEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTR
        NMAVVR GLLCL+L GM L Q TAA TAEAP VA A P+F A IG E   E Q  VA  PEIRRLG+HH HTSMAGGGVL+GGLATAVFAVVFCYIRVTR
Subjt:  NMAVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKE---EEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTR

Query:  KPNAV
        KP+ V
Subjt:  KPNAV
TrEMBL top hitse value%identityAlignment
A0A067KB75 Uncharacterized protein3.2e-1356.12Show/hide
Query:  MAVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKEEEQAVVAEAPEIRRLGRHH-FHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        MA +RL + CLILAG+ ++Q T AD +E  + + A    A+    EE     AEAPEIRRLG+HH    S+AGGGV+IGGL TA+FA VFCYIRVTRK
Subjt:  MAVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKEEEQAVVAEAPEIRRLGRHH-FHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
A0A0A0KCY0 Uncharacterized protein8.0e-2569.9Show/hide
Query:  AVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKEE--EQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPN
        AVVRL L+ LILAGM  IQ TAA+  EAP V  A  +F + IGKEE  +  VVAE P IRRLG+HHFHTS+AGG VLIG LATAVFA+VFCYIRVTRKPN
Subjt:  AVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKEE--EQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPN

Query:  AVN
         VN
Subjt:  AVN
A0A200QMD0 Uncharacterized protein5.4e-1369.49Show/hide
Query:  KEEEQAVVAEAPEIRRLGRHHFHT----SMAGGGVLIGGLATAVFAVVFCYIRVTRKPN
        K E+Q  VAEAPEIRR+G+HH H+    S+AGGGV+IGGLATA+FA VFCYIRVTR+ N
Subjt:  KEEEQAVVAEAPEIRRLGRHHFHT----SMAGGGVLIGGLATAVFAVVFCYIRVTRKPN
A0A5D3C590 Uncharacterized protein2.4e-1356.7Show/hide
Query:  LLCLILAGMTLIQ--PTAADTAEAPAVAAATPYFAAGIGKEEEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN
        L CLI+A + LIQ   + A T + P  AA  P   A  G   E + VAEAPEIRRLG+HH   S+AGGGV+IGGL TA+FA VFCYIRVTRK + V+
Subjt:  LLCLILAGMTLIQ--PTAADTAEAPAVAAATPYFAAGIGKEEEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN
A0A6J1G7L7 uncharacterized protein LOC1114516323.8e-2773.08Show/hide
Query:  MAVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKE---EEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        MAVVR GLLCL+L GM L Q TAA TAEAP VA A P+F   IGKE   E Q  VA  PEIRRLG+HH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRK
Subjt:  MAVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKE---EEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK

Query:  PNAV
         + V
Subjt:  PNAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein1.0e-0846.75Show/hide
Query:  APAVAAATPYFAAGIGKEEEQAVVAEAPEIRRL------GRHH--FHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        A A + A P     +G+ E     AEAPE+  L      G HH     S+AGGGV++GGLAT    VVFCYIR TRK
Subjt:  APAVAAATPYFAAGIGKEEEQAVVAEAPEIRRL------GRHH--FHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATATGGCTGTGGTTCGACTTGGTTTGCTGTGTCTGATTCTCGCCGGGATGACGTTGATCCAACCCACGGCAGCGGATACCGCCGAGGCGCCAGCTGTTGCCGCCGCGAC
GCCATATTTTGCAGCTGGAATCGGAAAGGAGGAGGAGCAGGCAGTAGTGGCTGAAGCTCCTGAAATCCGACGGCTGGGAAGGCATCATTTTCACACCTCCATGGCCGGTG
GAGGGGTGCTGATCGGCGGCCTCGCCACTGCTGTATTTGCTGTGGTCTTTTGCTACATTCGGGTGACTAGAAAACCAAACGCTGTCAAT
mRNA sequenceShow/hide mRNA sequence
AATATGGCTGTGGTTCGACTTGGTTTGCTGTGTCTGATTCTCGCCGGGATGACGTTGATCCAACCCACGGCAGCGGATACCGCCGAGGCGCCAGCTGTTGCCGCCGCGAC
GCCATATTTTGCAGCTGGAATCGGAAAGGAGGAGGAGCAGGCAGTAGTGGCTGAAGCTCCTGAAATCCGACGGCTGGGAAGGCATCATTTTCACACCTCCATGGCCGGTG
GAGGGGTGCTGATCGGCGGCCTCGCCACTGCTGTATTTGCTGTGGTCTTTTGCTACATTCGGGTGACTAGAAAACCAAACGCTGTCAAT
Protein sequenceShow/hide protein sequence
NMAVVRLGLLCLILAGMTLIQPTAADTAEAPAVAAATPYFAAGIGKEEEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN