; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004875 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004875
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAPO protein 4, mitochondrial
Genome locationscaffold176:1138850..1140287
RNA-Seq ExpressionMS004875
SyntenyMS004875
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR023342 - APO domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151879.1 APO protein 4, mitochondrial [Cucumis sativus]7.2e-15983.54Show/hide
Query:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS
        MAF+A+RRK   NVVQEFML RCYSSKV+LKKLRPMI KRI++RAK YPIK M PVAQQVLEARA+LIHGVSTLLK+FP++SCKFCPEVYVGE+GHLIRS
Subjt:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS

Query:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNS-DGGGSGRDEWLSSHELMLLANV
        CGGYKRGAKN+VH+WI GDL D++VPVEAFHLH MFQDVIKHDERFNFERVPAV ELC QAGANP+D+NL+SST NS +GGGSG DE LS HE+MLLA  
Subjt:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNS-DGGGSGRDEWLSSHELMLLANV

Query:  TLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCT
        T++AWETLRTGVQKLLMVYP KVCKYCSEVHVGPSGHKARLCGVF YESWRGSHFWEKA+VDDLVPP IVWHRR QDPP+LVD+G+DYYGH PAVVALCT
Subjt:  TLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCT

Query:  QAGVVAPSKYHCMMKIQGLSPR
        QAGV+AP KYHCMMK+QGLSPR
Subjt:  QAGVVAPSKYHCMMKIQGLSPR

XP_022140768.1 APO protein 4, mitochondrial [Momordica charantia]2.2e-18499.37Show/hide
Query:  RKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRG
        RKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPI AMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRG
Subjt:  RKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRG

Query:  AKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELMLLANVTLKAWETL
        AKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELM LANVTLKAWETL
Subjt:  AKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELMLLANVTLKAWETL

Query:  RTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPS
        RTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPS
Subjt:  RTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPS

Query:  KYHCMMKIQGLSPRT
        KYHCMMKIQGLSPRT
Subjt:  KYHCMMKIQGLSPRT

XP_022971049.1 APO protein 4, mitochondrial-like [Cucurbita maxima]2.2e-16084.95Show/hide
Query:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS
        MAF+ALRRKL +NVVQEFML RCYSSKVDLKKLRPMI KR++NRA  YPIK MIPVAQ+VLEARA+LIHGVSTLLK FP++SCKFCPEVYVG++GHLIRS
Subjt:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS

Query:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELMLLANVT
        CGGYKRGAKNRVHEWI GDLND+LVPVE+FHL  MFQDVIKHDERF+FERVPAV ELCWQAGANPNDENLSSST NSD  G GRDE LSSHELM+LAN T
Subjt:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELMLLANVT

Query:  LKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQ
        ++AWET+RTGVQKLLMVYP KVCK+CSEVHVGPSGHKARLCGVFKYESWRGSHFWEK +VDDLVPP  VWHRR QDPP+LVDEGRDYYGH PAV+ALC Q
Subjt:  LKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQ

Query:  AGVVAPSKYHCMMKIQGLS
        AG +APSKYHCMMK+QGLS
Subjt:  AGVVAPSKYHCMMKIQGLS

XP_023532078.1 APO protein 4, mitochondrial [Cucurbita pepo subsp. pepo]1.7e-16084.42Show/hide
Query:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS
        MAF+ALRRKL +NVVQEFML RCYSSKVDLKKLRPMI KR++NRA  YPIK MIPVAQ+VLEARA LIHGVSTLLK FP++SCKFCPEVYVG++GHLIRS
Subjt:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS

Query:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNS--DGGGSGRDEWLSSHELMLLAN
        CGGYK GAKNRVHEWI GDLND+LVPVE+FHL  MFQDVIKHDERF+F+RVPAV ELCWQAGANPNDENLSSST NS  DG G+GRDE LSSHELM+LAN
Subjt:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNS--DGGGSGRDEWLSSHELMLLAN

Query:  VTLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALC
         T++AWET+RTGVQKLLMVYP KVCK+CSEVHVGPSGHKARLCGVFKYESWRGSHFWEKA+VDDLVPP  VWHRR QDPP+LVDEGRDYYGH PAV+ALC
Subjt:  VTLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALC

Query:  TQAGVVAPSKYHCMMKIQGLS
         QAG +APSKYHCMMK+QGLS
Subjt:  TQAGVVAPSKYHCMMKIQGLS

XP_038901944.1 APO protein 4, mitochondrial [Benincasa hispida]4.1e-16283.28Show/hide
Query:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS
        MAF+AL+RK  + VVQEF+LHRCYSSKV+LKKLRPMI KRI+NR K YPI+ M PVAQQVLEAR +LIHGVSTLLK+FP++SCKFCPEVYVGE+GHLIRS
Subjt:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS

Query:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNS-DGGGSGRDEWLSSHELMLLANV
        CGGYKRGAKN+VHEWI GDLND++VPVE+FHLH MFQDVIKHDERFNFERVPAV ELCWQAGANPNDEN SSST NS +GGGSGRD+ LS HE+MLLA  
Subjt:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNS-DGGGSGRDEWLSSHELMLLANV

Query:  TLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCT
        T++AWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYE WRGSHFWEKA++DDLVPP +VWHRRPQDPP+L+DEGRDYYGH PAV+ALCT
Subjt:  TLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCT

Query:  QAGVVAPSKYHCMMKIQGLSPRT
        QAG +APSKYHCMMK+QG+SPR+
Subjt:  QAGVVAPSKYHCMMKIQGLSPRT

TrEMBL top hitse value%identityAlignment
A0A0A0LQG5 Uncharacterized protein3.5e-15983.54Show/hide
Query:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS
        MAF+A+RRK   NVVQEFML RCYSSKV+LKKLRPMI KRI++RAK YPIK M PVAQQVLEARA+LIHGVSTLLK+FP++SCKFCPEVYVGE+GHLIRS
Subjt:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS

Query:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNS-DGGGSGRDEWLSSHELMLLANV
        CGGYKRGAKN+VH+WI GDL D++VPVEAFHLH MFQDVIKHDERFNFERVPAV ELC QAGANP+D+NL+SST NS +GGGSG DE LS HE+MLLA  
Subjt:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNS-DGGGSGRDEWLSSHELMLLANV

Query:  TLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCT
        T++AWETLRTGVQKLLMVYP KVCKYCSEVHVGPSGHKARLCGVF YESWRGSHFWEKA+VDDLVPP IVWHRR QDPP+LVD+G+DYYGH PAVVALCT
Subjt:  TLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCT

Query:  QAGVVAPSKYHCMMKIQGLSPR
        QAGV+AP KYHCMMK+QGLSPR
Subjt:  QAGVVAPSKYHCMMKIQGLSPR

A0A5A7TJ18 APO protein 45.0e-15882.61Show/hide
Query:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS
        MAF+A+RRK   NVVQEFML RCYSSKV+LKKLRPMI KRI++RAK YPIK M PVAQQVLEARA+LIHGVSTLLK+FP++SCK+CPEVYVG +GHLIRS
Subjt:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS

Query:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNS-DGGGSGRDEWLSSHELMLLANV
        CGGYKRGAKN+VH+WI GDLND++VPVEAFHLH MFQDVIKHDERFNFERVPAV ELC QAG NP+D++L+SST NS +GGGSG DE  S HE+MLLA  
Subjt:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNS-DGGGSGRDEWLSSHELMLLANV

Query:  TLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCT
        T++AWETLRTGVQKLLMVYP KVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKA+VDDLVPP IVWHRR QDPP+LVD+GRDYYGH PAVVALCT
Subjt:  TLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCT

Query:  QAGVVAPSKYHCMMKIQGLSPR
        QAG +AP KYHCMMK+QGLSPR
Subjt:  QAGVVAPSKYHCMMKIQGLSPR

A0A6J1CIR9 APO protein 4, mitochondrial1.1e-18499.37Show/hide
Query:  RKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRG
        RKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPI AMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRG
Subjt:  RKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRG

Query:  AKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELMLLANVTLKAWETL
        AKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELM LANVTLKAWETL
Subjt:  AKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELMLLANVTLKAWETL

Query:  RTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPS
        RTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPS
Subjt:  RTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPS

Query:  KYHCMMKIQGLSPRT
        KYHCMMKIQGLSPRT
Subjt:  KYHCMMKIQGLSPRT

A0A6J1G8H9 APO protein 4, mitochondrial-like3.5e-15983.7Show/hide
Query:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS
        MAF+ALRRKL +NVVQEFML RCYSSKVDLKKLRPMI KR++NRA  YPIK MIPVAQ+VLEARA+LIHGVSTLLK FP++SCKFCPEVYVG++GHLIRS
Subjt:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS

Query:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELMLLANVT
        CGGYK GAKNRVHEW  GDLND+LVPVE+FHLH MFQDVIKHDERF+FERVPAV ELCWQAGANPNDE+LSS T NSD  G+GRDE LSSHELM+LA+ T
Subjt:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELMLLANVT

Query:  LKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQ
        ++AWET+RTGV KLLMVYP KVCK+CSEVHVGPSGHKARLCGVFKYESWRGSHFWEKA+VDDLVPP  VWHRR QDPP+LVDEGRDYYGH PAV+ALC Q
Subjt:  LKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQ

Query:  AGVVAPSKYHCMMKIQGLS
        AG +APSKYHCMMK+QGLS
Subjt:  AGVVAPSKYHCMMKIQGLS

A0A6J1I7G7 APO protein 4, mitochondrial-like1.1e-16084.95Show/hide
Query:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS
        MAF+ALRRKL +NVVQEFML RCYSSKVDLKKLRPMI KR++NRA  YPIK MIPVAQ+VLEARA+LIHGVSTLLK FP++SCKFCPEVYVG++GHLIRS
Subjt:  MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRS

Query:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELMLLANVT
        CGGYKRGAKNRVHEWI GDLND+LVPVE+FHL  MFQDVIKHDERF+FERVPAV ELCWQAGANPNDENLSSST NSD  G GRDE LSSHELM+LAN T
Subjt:  CGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELMLLANVT

Query:  LKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQ
        ++AWET+RTGVQKLLMVYP KVCK+CSEVHVGPSGHKARLCGVFKYESWRGSHFWEK +VDDLVPP  VWHRR QDPP+LVDEGRDYYGH PAV+ALC Q
Subjt:  LKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQ

Query:  AGVVAPSKYHCMMKIQGLS
        AG +APSKYHCMMK+QGLS
Subjt:  AGVVAPSKYHCMMKIQGLS

SwissProt top hitse value%identityAlignment
Q8W4A5 APO protein 2, chloroplastic2.6e-5537.37Show/hide
Query:  IKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFE
        +K+++P+A +V  AR  LI+ +  L+K   + +C +C E++VG  GH  +SC G     +  +HEW    + DV+VP+EA+HL       I+HDERF+  
Subjt:  IKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFE

Query:  RVPAVAELCWQAGAN------PNDENLSSSTGNSDGGGSGRDEW------------------------LSSHELMLLANVTLKAWETLRTGVQKLLMVYP
        RVPAV ELC Q G                  G S+   +   E                          S  E + LA  TL+AWE +R G +KL+ +Y 
Subjt:  RVPAVAELCWQAGAN------PNDENLSSSTGNSDGGGSGRDEW------------------------LSSHELMLLANVTLKAWETLRTGVQKLLMVYP

Query:  AKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQ
         +VC YC EVHVGP+GHKA+ CG FK++   G H W+ A +DDL+PP  VWH    + P +  E R +YG  PAVV +C QAG V P  Y   M+++
Subjt:  AKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQ

Q9FH50 APO protein 3, mitochondrial3.6e-4433Show/hide
Query:  IKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLH-RMFQDVIKHDERFNF
        +  ++ VA  V   R +L+ G+S ++   P+  C+ C EV++G+QGH IR+C G   G+++  H W  G ++DV++  + FHL+ R  +  + HDERF  
Subjt:  IKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLH-RMFQDVIKHDERFNF

Query:  ERVPAVAELCWQAGA-------------------------NPNDEN----LSSSTGNSDGGGSGRDEWLSSHELMLLANVTLKAWETLRTGVQKLLMVYP
         ++ AV ELC QAG                          + ND N    ++S+T         ++E  S  EL      T+++W  +  GV+KL+  Y 
Subjt:  ERVPAVAELCWQAGA-------------------------NPNDEN----LSSSTGNSDGGGSGRDEWLSSHELMLLANVTLKAWETLRTGVQKLLMVYP

Query:  AKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWH-RRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQGL
           C YC E+ VGP GHK R+C   K++   G H W++A +DD+V P  VWH R P D  +L +  + +YG  PAV+ +C Q G   P +Y+ MM++  +
Subjt:  AKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWH-RRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQGL

Query:  SPR
         P+
Subjt:  SPR

Q9LSZ0 APO protein 4, mitochondrial1.5e-10359.93Show/hide
Query:  DLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVE
        DL+KLRPMI KRIENRAK YP+K ++PVA+++L AR  LI  ++ LLK FP+++CKFC EV+VG++GHLI +C  Y R   NR+HEW+ G +ND+LVPVE
Subjt:  DLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVE

Query:  AFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRD-EWLSSHELMLLANVTLKAWETLRTGVQKLLMVYPAKVCKYCS
        ++HLH + Q VI+H ERF+++RVPA+ ELC QAGA   +E L  S  + +   S  D   L + +L  +    L AWE +R GV+KLL+VYP+KVCK C 
Subjt:  AFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRD-EWLSSHELMLLANVTLKAWETLRTGVQKLLMVYPAKVCKYCS

Query:  EVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQGLS
        EVHVGPSGHKARLCGVFKYESWRG+H+WEKA V+DLVP  +VWHRRPQDP +LVDEGR YYGH PA+V+LC+  G + P KY C MK QGLS
Subjt:  EVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQGLS

Q9XIR4 APO protein 1, chloroplastic6.1e-5235.08Show/hide
Query:  KKLRPM-ISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEA
        KKL  M I K+++       +  ++PVA QV++   +LI G++ LL   P+ +C  C  V+V   GH IR C G     +   H W+ G +NDVL+PVE+
Subjt:  KKLRPM-ISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEA

Query:  FHLHRMFQDVIKHDERFNFERVPAVAELCWQAGAN---------------------------------PNDENLSSSTGNSDG-GGSGRDEWLSSHELML
        +H++  F   IKH+ RF +ER+PA+ ELC QAG                                       +LSS     D  G   R    +  ++  
Subjt:  FHLHRMFQDVIKHDERFNFERVPAVAELCWQAGAN---------------------------------PNDENLSSSTGNSDG-GGSGRDEWLSSHELML

Query:  LANVTLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVV
        +A  T+ A+E +R GV KL+  +  K C YCSEVHVGP GH  +LCG FK++   G H W+ A VD++ PPN VWH R      L    R +YG  PA+V
Subjt:  LANVTLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVV

Query:  ALCTQAGVVAPSKYHCMMKIQGLSP
         +C  +G   P +Y  MM++  + P
Subjt:  ALCTQAGVVAPSKYHCMMKIQGLSP

Arabidopsis top hitse value%identityAlignment
AT1G64810.1 Arabidopsis thaliana protein of unknown function (DUF794)4.3e-5335.08Show/hide
Query:  KKLRPM-ISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEA
        KKL  M I K+++       +  ++PVA QV++   +LI G++ LL   P+ +C  C  V+V   GH IR C G     +   H W+ G +NDVL+PVE+
Subjt:  KKLRPM-ISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEA

Query:  FHLHRMFQDVIKHDERFNFERVPAVAELCWQAGAN---------------------------------PNDENLSSSTGNSDG-GGSGRDEWLSSHELML
        +H++  F   IKH+ RF +ER+PA+ ELC QAG                                       +LSS     D  G   R    +  ++  
Subjt:  FHLHRMFQDVIKHDERFNFERVPAVAELCWQAGAN---------------------------------PNDENLSSSTGNSDG-GGSGRDEWLSSHELML

Query:  LANVTLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVV
        +A  T+ A+E +R GV KL+  +  K C YCSEVHVGP GH  +LCG FK++   G H W+ A VD++ PPN VWH R      L    R +YG  PA+V
Subjt:  LANVTLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVV

Query:  ALCTQAGVVAPSKYHCMMKIQGLSP
         +C  +G   P +Y  MM++  + P
Subjt:  ALCTQAGVVAPSKYHCMMKIQGLSP

AT1G64810.2 Arabidopsis thaliana protein of unknown function (DUF794)4.3e-5335.08Show/hide
Query:  KKLRPM-ISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEA
        KKL  M I K+++       +  ++PVA QV++   +LI G++ LL   P+ +C  C  V+V   GH IR C G     +   H W+ G +NDVL+PVE+
Subjt:  KKLRPM-ISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEA

Query:  FHLHRMFQDVIKHDERFNFERVPAVAELCWQAGAN---------------------------------PNDENLSSSTGNSDG-GGSGRDEWLSSHELML
        +H++  F   IKH+ RF +ER+PA+ ELC QAG                                       +LSS     D  G   R    +  ++  
Subjt:  FHLHRMFQDVIKHDERFNFERVPAVAELCWQAGAN---------------------------------PNDENLSSSTGNSDG-GGSGRDEWLSSHELML

Query:  LANVTLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVV
        +A  T+ A+E +R GV KL+  +  K C YCSEVHVGP GH  +LCG FK++   G H W+ A VD++ PPN VWH R      L    R +YG  PA+V
Subjt:  LANVTLKAWETLRTGVQKLLMVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVV

Query:  ALCTQAGVVAPSKYHCMMKIQGLSP
         +C  +G   P +Y  MM++  + P
Subjt:  ALCTQAGVVAPSKYHCMMKIQGLSP

AT3G21740.1 Arabidopsis thaliana protein of unknown function (DUF794)1.1e-10459.93Show/hide
Query:  DLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVE
        DL+KLRPMI KRIENRAK YP+K ++PVA+++L AR  LI  ++ LLK FP+++CKFC EV+VG++GHLI +C  Y R   NR+HEW+ G +ND+LVPVE
Subjt:  DLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVE

Query:  AFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRD-EWLSSHELMLLANVTLKAWETLRTGVQKLLMVYPAKVCKYCS
        ++HLH + Q VI+H ERF+++RVPA+ ELC QAGA   +E L  S  + +   S  D   L + +L  +    L AWE +R GV+KLL+VYP+KVCK C 
Subjt:  AFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRD-EWLSSHELMLLANVTLKAWETLRTGVQKLLMVYPAKVCKYCS

Query:  EVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQGLS
        EVHVGPSGHKARLCGVFKYESWRG+H+WEKA V+DLVP  +VWHRRPQDP +LVDEGR YYGH PA+V+LC+  G + P KY C MK QGLS
Subjt:  EVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQGLS

AT5G57930.1 Arabidopsis thaliana protein of unknown function (DUF794)1.9e-5637.37Show/hide
Query:  IKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFE
        +K+++P+A +V  AR  LI+ +  L+K   + +C +C E++VG  GH  +SC G     +  +HEW    + DV+VP+EA+HL       I+HDERF+  
Subjt:  IKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFE

Query:  RVPAVAELCWQAGAN------PNDENLSSSTGNSDGGGSGRDEW------------------------LSSHELMLLANVTLKAWETLRTGVQKLLMVYP
        RVPAV ELC Q G                  G S+   +   E                          S  E + LA  TL+AWE +R G +KL+ +Y 
Subjt:  RVPAVAELCWQAGAN------PNDENLSSSTGNSDGGGSGRDEW------------------------LSSHELMLLANVTLKAWETLRTGVQKLLMVYP

Query:  AKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQ
         +VC YC EVHVGP+GHKA+ CG FK++   G H W+ A +DDL+PP  VWH    + P +  E R +YG  PAVV +C QAG V P  Y   M+++
Subjt:  AKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQ

AT5G57930.2 Arabidopsis thaliana protein of unknown function (DUF794)1.9e-5637.37Show/hide
Query:  IKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFE
        +K+++P+A +V  AR  LI+ +  L+K   + +C +C E++VG  GH  +SC G     +  +HEW    + DV+VP+EA+HL       I+HDERF+  
Subjt:  IKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKNRVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFE

Query:  RVPAVAELCWQAGAN------PNDENLSSSTGNSDGGGSGRDEW------------------------LSSHELMLLANVTLKAWETLRTGVQKLLMVYP
        RVPAV ELC Q G                  G S+   +   E                          S  E + LA  TL+AWE +R G +KL+ +Y 
Subjt:  RVPAVAELCWQAGAN------PNDENLSSSTGNSDGGGSGRDEW------------------------LSSHELMLLANVTLKAWETLRTGVQKLLMVYP

Query:  AKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQ
         +VC YC EVHVGP+GHKA+ CG FK++   G H W+ A +DDL+PP  VWH    + P +  E R +YG  PAVV +C QAG V P  Y   M+++
Subjt:  AKVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTGTGGCTCTCAGAAGGAAATTGGTTCAGAACGTTGTGCAGGAATTCATGCTACACCGGTGCTATAGCTCTAAGGTCGACCTTAAGAAACTCCGTCCAATGAT
TTCGAAGAGAATTGAAAATCGGGCGAAATTCTATCCTATAAAGGCCATGATTCCAGTGGCACAACAAGTTCTTGAAGCTAGGGCAGTGCTTATTCATGGAGTTTCCACTC
TTCTTAAGGCATTTCCAATTGTCTCTTGCAAATTTTGTCCAGAAGTATATGTCGGTGAGCAAGGTCATCTAATACGGAGTTGTGGCGGTTACAAACGTGGTGCCAAGAAT
CGGGTTCATGAATGGATCGGAGGTGATTTGAATGATGTTCTTGTCCCAGTAGAAGCATTTCACCTCCATCGCATGTTCCAAGATGTTATTAAACATGATGAGAGATTCAA
CTTTGAACGTGTTCCAGCAGTTGCCGAGCTATGCTGGCAAGCTGGAGCCAATCCAAATGATGAAAATCTGTCTTCAAGCACTGGGAATTCAGATGGTGGTGGCTCAGGCA
GAGATGAATGGTTGTCAAGTCATGAGCTGATGCTTTTAGCAAATGTAACTCTCAAGGCATGGGAAACGCTTAGAACCGGTGTGCAGAAACTGTTAATGGTTTATCCTGCT
AAGGTCTGTAAATACTGCTCAGAAGTTCATGTTGGGCCATCAGGACACAAAGCTAGACTTTGTGGGGTTTTTAAATATGAGAGTTGGCGAGGCTCCCACTTCTGGGAGAA
GGCAAATGTAGACGATTTAGTTCCTCCAAATATTGTATGGCATCGGCGACCACAAGATCCTCCCATGCTTGTCGACGAAGGAAGGGATTATTATGGACATGTACCAGCAG
TGGTGGCTCTTTGCACACAGGCCGGCGTCGTTGCACCATCTAAATATCATTGCATGATGAAAATTCAAGGCTTATCACCACGAACT
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTTGTGGCTCTCAGAAGGAAATTGGTTCAGAACGTTGTGCAGGAATTCATGCTACACCGGTGCTATAGCTCTAAGGTCGACCTTAAGAAACTCCGTCCAATGAT
TTCGAAGAGAATTGAAAATCGGGCGAAATTCTATCCTATAAAGGCCATGATTCCAGTGGCACAACAAGTTCTTGAAGCTAGGGCAGTGCTTATTCATGGAGTTTCCACTC
TTCTTAAGGCATTTCCAATTGTCTCTTGCAAATTTTGTCCAGAAGTATATGTCGGTGAGCAAGGTCATCTAATACGGAGTTGTGGCGGTTACAAACGTGGTGCCAAGAAT
CGGGTTCATGAATGGATCGGAGGTGATTTGAATGATGTTCTTGTCCCAGTAGAAGCATTTCACCTCCATCGCATGTTCCAAGATGTTATTAAACATGATGAGAGATTCAA
CTTTGAACGTGTTCCAGCAGTTGCCGAGCTATGCTGGCAAGCTGGAGCCAATCCAAATGATGAAAATCTGTCTTCAAGCACTGGGAATTCAGATGGTGGTGGCTCAGGCA
GAGATGAATGGTTGTCAAGTCATGAGCTGATGCTTTTAGCAAATGTAACTCTCAAGGCATGGGAAACGCTTAGAACCGGTGTGCAGAAACTGTTAATGGTTTATCCTGCT
AAGGTCTGTAAATACTGCTCAGAAGTTCATGTTGGGCCATCAGGACACAAAGCTAGACTTTGTGGGGTTTTTAAATATGAGAGTTGGCGAGGCTCCCACTTCTGGGAGAA
GGCAAATGTAGACGATTTAGTTCCTCCAAATATTGTATGGCATCGGCGACCACAAGATCCTCCCATGCTTGTCGACGAAGGAAGGGATTATTATGGACATGTACCAGCAG
TGGTGGCTCTTTGCACACAGGCCGGCGTCGTTGCACCATCTAAATATCATTGCATGATGAAAATTCAAGGCTTATCACCACGAACT
Protein sequenceShow/hide protein sequence
MAFVALRRKLVQNVVQEFMLHRCYSSKVDLKKLRPMISKRIENRAKFYPIKAMIPVAQQVLEARAVLIHGVSTLLKAFPIVSCKFCPEVYVGEQGHLIRSCGGYKRGAKN
RVHEWIGGDLNDVLVPVEAFHLHRMFQDVIKHDERFNFERVPAVAELCWQAGANPNDENLSSSTGNSDGGGSGRDEWLSSHELMLLANVTLKAWETLRTGVQKLLMVYPA
KVCKYCSEVHVGPSGHKARLCGVFKYESWRGSHFWEKANVDDLVPPNIVWHRRPQDPPMLVDEGRDYYGHVPAVVALCTQAGVVAPSKYHCMMKIQGLSPRT