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MS004887 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004887
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4228 domain-containing protein
Genome locationscaffold176:1214682..1215122
RNA-Seq ExpressionMS004887
SyntenyMS004887
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570883.1 hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia]7.8e-3663.4Show/hide
Query:  MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARI-AARGKKVVRFQLREDEISGGGGGGGG---GVLRIKVVVSQKELKQI
        MGN C +SN+VMAQDE+C    NS   E   KVE+KP AGSA+A+PKT E R  AA GKKVVRF+L+E++ + GG GG G   GVLRIKVV+SQ+ELKQI
Subjt:  MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARI-AARGKKVVRFQLREDEISGGGGGGGG---GVLRIKVVVSQKELKQI

Query:  LKDRESNSSTLEELLAELKMKGR-TISDARADKEEDENGSWRPALESIPEDLH
        LK+ E++S +LEEL+AE K+KGR T+SDA  D+ EDENGS RPALE IPE LH
Subjt:  LKDRESNSSTLEELLAELKMKGR-TISDARADKEEDENGSWRPALESIPEDLH

KGN63254.1 hypothetical protein Csa_022493 [Cucumis sativus]3.6e-2554.73Show/hide
Query:  MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLRE---DEISGGGGGGGGGVLRIKVVVSQKELKQIL
        MGN C +SN+VMAQD++    P   L E   KV+ +P  GSA+A+PK       A GKKVVRF L+E   DE     G  G GVLRIKVV+SQKELKQIL
Subjt:  MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLRE---DEISGGGGGGGGGVLRIKVVVSQKELKQIL

Query:  KDRESNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPE
        K RE+NS +LEEL+ ELK+KGR  +        DE GSW+PALE IPE
Subjt:  KDRESNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPE

TYK24218.1 hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa]5.3e-2453.21Show/hide
Query:  MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKP-AAGSALARPKTEEARIAARGKKVVRFQLREDEIS----GGGGGGGGGVLRIKVVVSQKELKQ
        MGN C R+N+VMAQD++    P     E   KVE++P   GSA+A+PK       A GKKVVRF L+E+E        G   G GVLRIKVV+SQKELK+
Subjt:  MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKP-AAGSALARPKTEEARIAARGKKVVRFQLREDEIS----GGGGGGGGGVLRIKVVVSQKELKQ

Query:  ILKDRESNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPE---DLH
        ILK+RE+NS +LEEL+ ELK+KG      RA    DE GSW+PALE IPE   DLH
Subjt:  ILKDRESNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPE---DLH

XP_022140639.1 uncharacterized protein LOC111011249 [Momordica charantia]2.8e-6594.56Show/hide
Query:  MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKDRE
        MGNCLR+NRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAAR KKVVRFQ REDEIS    GGGGGVLRIKVVVSQKELKQILKDRE
Subjt:  MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKDRE

Query:  SNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPEDLH
        SNSSTLEELLAELKMKGRTISDARAD EEDENGSWRPALESIPEDLH
Subjt:  SNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPEDLH

XP_038902397.1 uncharacterized protein LOC120089037 [Benincasa hispida]1.8e-3261.81Show/hide
Query:  NCLRSNRVMAQDEACSPSPNSSLTETN-YKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKDRES
        NC +SN+VMAQDE     P   L      KVE+KP  GSA+A+PKT EAR     KKVVRF+L+E+E       G GGVLRIKVV+SQKELKQ+LKDRE+
Subjt:  NCLRSNRVMAQDEACSPSPNSSLTETN-YKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKDRES

Query:  NSSTLEELLAELKMKGR-TISDARADKEEDENGSWRPALESIPE
        NS TLEEL+ ELK+KGR TISD R D  EDENG W+P LE IPE
Subjt:  NSSTLEELLAELKMKGR-TISDARADKEEDENGSWRPALESIPE

TrEMBL top hitse value%identityAlignment
A0A0A0LQE9 Uncharacterized protein1.8e-2554.73Show/hide
Query:  MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLRE---DEISGGGGGGGGGVLRIKVVVSQKELKQIL
        MGN C +SN+VMAQD++    P   L E   KV+ +P  GSA+A+PK       A GKKVVRF L+E   DE     G  G GVLRIKVV+SQKELKQIL
Subjt:  MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLRE---DEISGGGGGGGGGVLRIKVVVSQKELKQIL

Query:  KDRESNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPE
        K RE+NS +LEEL+ ELK+KGR  +        DE GSW+PALE IPE
Subjt:  KDRESNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPE

A0A5D3DKZ8 Uncharacterized protein2.5e-2453.21Show/hide
Query:  MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKP-AAGSALARPKTEEARIAARGKKVVRFQLREDEIS----GGGGGGGGGVLRIKVVVSQKELKQ
        MGN C R+N+VMAQD++    P     E   KVE++P   GSA+A+PK       A GKKVVRF L+E+E        G   G GVLRIKVV+SQKELK+
Subjt:  MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKP-AAGSALARPKTEEARIAARGKKVVRFQLREDEIS----GGGGGGGGGVLRIKVVVSQKELKQ

Query:  ILKDRESNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPE---DLH
        ILK+RE+NS +LEEL+ ELK+KG      RA    DE GSW+PALE IPE   DLH
Subjt:  ILKDRESNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPE---DLH

A0A6J1B1M6 uncharacterized protein LOC1104232931.2e-1340.65Show/hide
Query:  MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAA------RGKKVVRFQLREDEISGGG--GGGGGGVLRIKVVVSQKEL
        MGNCL SN+++AQ++   P P     E    +E+       +   K E A +AA      + KK+VRF+L E+    GG  G    GV+RI++VV+QKEL
Subjt:  MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAA------RGKKVVRFQLREDEISGGG--GGGGGGVLRIKVVVSQKEL

Query:  KQILKDRES-NSSTLEELLAELKMKGRTISD-ARADKEEDENGSWRPALESIPED
        KQIL  RE    ++LE L+  +K++G  IS+  R + ++  +G WRPALESIPE+
Subjt:  KQILKDRES-NSSTLEELLAELKMKGRTISD-ARADKEEDENGSWRPALESIPED

A0A6J1CG85 uncharacterized protein LOC1110112491.3e-6594.56Show/hide
Query:  MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKDRE
        MGNCLR+NRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAAR KKVVRFQ REDEIS    GGGGGVLRIKVVVSQKELKQILKDRE
Subjt:  MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKDRE

Query:  SNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPEDLH
        SNSSTLEELLAELKMKGRTISDARAD EEDENGSWRPALESIPEDLH
Subjt:  SNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPEDLH

A0A7N2MA05 Uncharacterized protein2.4e-1444Show/hide
Query:  MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLREDEISGGGGGGG---GGVLRIKVVVSQKELKQILK
        MGNCL SN+ +AQ+E           E     + KP+  S L   K  +     + KKVVRF+L ED+ + G    G    GV+RI+VVV+QKELKQIL 
Subjt:  MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLREDEISGGGGGGG---GGVLRIKVVVSQKELKQILK

Query:  DRES-NSSTLEELLAELKMKGRTISDAR-ADKEEDENGSWRPALESIPED
         +E    S++E+L+  L ++GR IS+ R +D++E  N +WRPALESIPED
Subjt:  DRES-NSSTLEELLAELKMKGRTISDAR-ADKEEDENGSWRPALESIPED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21680.1 unknown protein4.3e-0834.46Show/hide
Query:  MGNCLRSNRVMAQDEA--CSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKD
        MGNCLR +  +A+ E     P P   L E           G    R + E  R      KVV                     RIKVVV++KEL+QIL  
Subjt:  MGNCLRSNRVMAQDEA--CSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKD

Query:  RESNSSTLEELLAELKMKGRTISDARADKEEDENG--SWRPALESIPE
         ++  +++++L+  LK  GR IS A  +++E E G  +WRP LESIPE
Subjt:  RESNSSTLEELLAELKMKGRTISDARADKEEDENG--SWRPALESIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACTGCTTGAGGAGCAACAGAGTGATGGCGCAGGATGAGGCTTGTTCGCCTTCGCCTAATTCGTCTTTGACAGAAACTAATTACAAAGTGGAAGATAAACCAGC
CGCCGGATCGGCGCTGGCGCGGCCGAAGACGGAGGAGGCGAGAATCGCCGCGCGAGGTAAGAAGGTTGTGAGGTTTCAGCTACGAGAAGATGAAATTTCAGGCGGCGGAG
GCGGAGGCGGAGGCGGAGTATTGAGGATTAAAGTGGTGGTGTCGCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAAAGCAATTCCTCCACATTGGAGGAATTGTTA
GCTGAATTGAAGATGAAAGGCAGGACAATTTCAGATGCTAGAGCCGATAAAGAGGAGGATGAAAATGGAAGCTGGAGACCGGCCTTGGAAAGCATTCCTGAAGATCTCCA
T
mRNA sequenceShow/hide mRNA sequence
ATGGGGAACTGCTTGAGGAGCAACAGAGTGATGGCGCAGGATGAGGCTTGTTCGCCTTCGCCTAATTCGTCTTTGACAGAAACTAATTACAAAGTGGAAGATAAACCAGC
CGCCGGATCGGCGCTGGCGCGGCCGAAGACGGAGGAGGCGAGAATCGCCGCGCGAGGTAAGAAGGTTGTGAGGTTTCAGCTACGAGAAGATGAAATTTCAGGCGGCGGAG
GCGGAGGCGGAGGCGGAGTATTGAGGATTAAAGTGGTGGTGTCGCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAAAGCAATTCCTCCACATTGGAGGAATTGTTA
GCTGAATTGAAGATGAAAGGCAGGACAATTTCAGATGCTAGAGCCGATAAAGAGGAGGATGAAAATGGAAGCTGGAGACCGGCCTTGGAAAGCATTCCTGAAGATCTCCA
T
Protein sequenceShow/hide protein sequence
MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELL
AELKMKGRTISDARADKEEDENGSWRPALESIPEDLH