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MS004892 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004892
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Genome locationscaffold176:1242611..1242871
RNA-Seq ExpressionMS004892
SyntenyMS004892
Gene Ontology termsGO:0007229 - integrin-mediated signaling pathway (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059574.1 hypothetical protein E6C27_scaffold4837G00020 [Cucumis melo var. makuwa]3.4e-3189.77Show/hide
Query:  MGSKAPSWADQWGSGNYGVEEDE-NRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        MGSKAPSWADQWGSGNYGVE+D+ N   TKKGS+NG+SSKKMAEVKAAASAGFVKAKAVA VGAQKVKSGTSVGIKWVKNQYQKKVSK
Subjt:  MGSKAPSWADQWGSGNYGVEEDE-NRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

KAG6570886.1 hypothetical protein SDJN03_29801, partial [Cucurbita argyrosperma subsp. sororia]6.5e-3086.05Show/hide
Query:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVS
        MGSKAPSWADQWGSG+YGVE+D+N   TKKGS+NG+SSKKMA+VKAAASAGFVKAK+ AAVGAQKVKSGTSVGIKWVKNQYQKK S
Subjt:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVS

KAG6604861.1 hypothetical protein SDJN03_02178, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2989.29Show/hide
Query:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKK
        MGSKAPSWADQWGSGNYGVE+D+ ++  KKGS NGSSSKKM EVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKK
Subjt:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKK

KAG7010736.1 hypothetical protein SDJN02_27532, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-3187.36Show/hide
Query:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        MGSKAPSWADQWGSG+YGVE+D+N   TKKGS+NG+SSKKMA+VKAAASAGFVKAK+ AAVGAQKVKSGTSVGIKWVKNQYQKKVSK
Subjt:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

KAG7034974.1 hypothetical protein SDJN02_01767, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3089.66Show/hide
Query:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        MGSKAPSWADQWGSGNYGVE+D+ ++  KKGS+NGSSSKKM EVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
Subjt:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

TrEMBL top hitse value%identityAlignment
A0A0A0LR11 Uncharacterized protein1.7e-3189.77Show/hide
Query:  MGSKAPSWADQWGSGNYGVEEDE-NRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        MGSKAPSWADQWGSGNYGVE+D+ N   TKKGS+NG+SSKKMAEVKAAASAGFVKAKAVA VGAQKVKSGTSVGIKWVKNQYQKKVSK
Subjt:  MGSKAPSWADQWGSGNYGVEEDE-NRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

A0A2G5E5C3 Uncharacterized protein7.7e-2168.97Show/hide
Query:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        M  +APSWADQWGSG YG + +++   TKKGS+   S KKMA++K+ ASAG  KAKA AAVGAQKVKSGTSVGIKW+KNQYQKK SK
Subjt:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

A0A5C7HG95 Uncharacterized protein2.3e-2579.07Show/hide
Query:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVS
        MGSKAPSWADQWGSG++G EED+N++ TKK S++G SSKKMAE KAAASAGF KAKA A+VGAQKVKSGTSVG+KWVK QYQKK S
Subjt:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVS

A0A5D3DKS5 Uncharacterized protein1.7e-3189.77Show/hide
Query:  MGSKAPSWADQWGSGNYGVEEDE-NRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        MGSKAPSWADQWGSGNYGVE+D+ N   TKKGS+NG+SSKKMAEVKAAASAGFVKAKAVA VGAQKVKSGTSVGIKWVKNQYQKKVSK
Subjt:  MGSKAPSWADQWGSGNYGVEEDE-NRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

V4UEV4 Uncharacterized protein4.5e-2168.6Show/hide
Query:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVS
        MGSKAPSWADQWG+G +GV+E+++++ TK  S++G +  K+ EVKAAASAGF KAK+ AAVGAQKVK+GTS GIKWVK QYQKK S
Subjt:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11740.1 ankyrin repeat family protein5.0e-0436.9Show/hide
Query:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKK
        M S+APSWADQWG+G  GV   E     KK      S K          AG  KAK V             +G+ W+KN  Q+K
Subjt:  MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKK

AT1G19020.1 unknown protein6.5e-0436.9Show/hide
Query:  SWADQW---GSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        SWADQW   G    G       V    GS   S++ K    K     G  K KAVA+ G +K+K+G+++G +WVK++Y K   K
Subjt:  SWADQW---GSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

AT3G48180.1 unknown protein2.4e-0641.98Show/hide
Query:  SWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        SWA+QW S      +  +  TT  G   G+SSK     K    AG  K KA A+ G +KVK GTS+G+ WVK++Y K  +K
Subjt:  SWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCAAAGCACCAAGCTGGGCGGATCAGTGGGGTTCGGGCAATTACGGAGTCGAAGAGGACGAGAACAGGGTGACAACGAAGAAAGGGAGCAACAATGGCAGTAG
TAGCAAGAAGATGGCAGAGGTAAAGGCAGCAGCCTCAGCTGGCTTTGTGAAGGCGAAGGCTGTTGCAGCAGTGGGTGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCA
TCAAATGGGTCAAGAATCAGTACCAGAAAAAGGTCTCCAAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGCAAAGCACCAAGCTGGGCGGATCAGTGGGGTTCGGGCAATTACGGAGTCGAAGAGGACGAGAACAGGGTGACAACGAAGAAAGGGAGCAACAATGGCAGTAG
TAGCAAGAAGATGGCAGAGGTAAAGGCAGCAGCCTCAGCTGGCTTTGTGAAGGCGAAGGCTGTTGCAGCAGTGGGTGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCA
TCAAATGGGTCAAGAATCAGTACCAGAAAAAGGTCTCCAAA
Protein sequenceShow/hide protein sequence
MGSKAPSWADQWGSGNYGVEEDENRVTTKKGSNNGSSSKKMAEVKAAASAGFVKAKAVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK