; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004912 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004912
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold176:1401064..1402089
RNA-Seq ExpressionMS004912
SyntenyMS004912
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604878.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.5e-15786.01Show/hide
Query:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL
        MK GT   S+FLL FHQFLRQ SS+ +I+P+Q+LQESI+AAVESK Y++LPDLFPSL++ACQNP+PFSFLST PVNF T VVDEILQSLIPLRPRSRPQ 
Subjt:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL

Query:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA
        V+ASLLFYTLQSPSPLPLSLPVLQRILHSGCVP PQTHLLLSS WLKQR QSKSVA+ILL+MRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MGGA
Subjt:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA

Query:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV
        GC+PDLESYGTLI +STAVRRT EAVELLKEMVVKVKLTPRQGT+INVVAALRANREIRRAVEIIELLEKES+NVGFESYE+LVEGCL+C EYILAGKVV
Subjt:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV

Query:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS
        MGMT++G+IPYIRVR KVVEGLA +GE ELASAVRRRFAELRS
Subjt:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS

XP_022140758.1 pentatricopeptide repeat-containing protein At1g06270 [Momordica charantia]3.8e-18299.71Show/hide
Query:  MKTGTTNFSAFLLFHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLV
        MKTGTTNFSAFLLFHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLV
Subjt:  MKTGTTNFSAFLLFHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLV

Query:  YASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAG
        YASLLFYTLQSPSPLPLSL VLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAG
Subjt:  YASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAG

Query:  CIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVM
        CIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVM
Subjt:  CIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVM

Query:  GMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS
        GMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS
Subjt:  GMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS

XP_022947166.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata]2.9e-15886.59Show/hide
Query:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL
        MK GT   S+FLL FHQFLRQ SS+ +I+P+Q+LQESI+AAVESK Y+KLPDLFPSL++ACQNP+PFSFLST PVNF T VVDEILQSLIPLRPRSRPQ 
Subjt:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL

Query:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA
        V+ASLLFYTLQSPSPLPLSLPVLQRILHSGCVP PQTHLLLSS WLKQR QSKSVA+ILL+MRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MGGA
Subjt:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA

Query:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV
        GC+PDLESYGTLI +STAVRRT EAVELLKEMVVKVKLTPRQGT+INVVAALRANREIRRAVEIIELLEKES+NVGFESYE+LVEGCL+CREYILAGKVV
Subjt:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV

Query:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS
        MGMT++G+IPYIRVR KVVEGLA +GE ELASAVRRRFAELRS
Subjt:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS

XP_022971046.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima]2.0e-15987.46Show/hide
Query:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL
        MK GT   S+FLL FHQFLR  SS+ +I+P+QTLQESIKAAVESK YKKLPDLFPSL++ACQNP+PFSFLST PVNF TQVVDEILQSLIPLRPRSRPQ 
Subjt:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL

Query:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA
        V+ASLLFYTLQSPSPLPLSLPVLQRILHSGC P PQTHLLLSSAWLKQR QSKSVA+ILLDMRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MGGA
Subjt:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA

Query:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV
        GC+PDLESYGTLI +STAVRRT EAVELLKEMVVKVKLTPR+GT+INVVAALRANREIRRAVEIIELLEKES+NVGFESYE+LVEGCL+CREYILAGKVV
Subjt:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV

Query:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS
        MGMT++G+IPYIRVR KVVEGLA +GE ELASAVRRRFAELRS
Subjt:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS

XP_023533787.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita pepo subsp. pepo]4.9e-15886.59Show/hide
Query:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL
        MK GT   S+FLL FHQFLRQ SS+ +I+P+Q+LQESI+AAVESK Y+KLPDLFPSL++ACQNP+PFSFLST PVNF T VVDEILQSLIPLRPRSRPQ 
Subjt:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL

Query:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA
        V+ASLLFYTLQSPSPLPLSLPVLQRILHSGCVP PQTHLLLSS WLKQR QSKSVA+ILLDMRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MGGA
Subjt:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA

Query:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV
        GC+PDLESYGTLI +STAVRRT EAVELLKEMVVKVKLTPRQGT+INVVAALRAN EIRRAVEIIELLEKES+NVGFESYE+LVEGCL+CREYILAGKVV
Subjt:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV

Query:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS
        MGMT++G+IPYIRVR KVVEGLA +GE ELASAVRRRFAELRS
Subjt:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS

TrEMBL top hitse value%identityAlignment
A0A0A0LFL3 Uncharacterized protein3.5e-14982.22Show/hide
Query:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL
        M  G T  SAFLL FH FL QYSSIH+ISPSQTLQ+SIKAAVESK YKKLPDLFPSL++AC NP+ F FLST P+N  TQVVDEILQSLI +RPRS+ Q 
Subjt:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL

Query:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA
        V+ SLLFYTLQSPSP PLSLPVLQRILHSGCVP+PQTH LLSSAWLKQR Q+KSVANIL+DM+SIGY+PDS+ICNYLISSLC+I ELAEA QVLK MGGA
Subjt:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA

Query:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV
        GCIPDLESYGTLI A+TAVRRT +AVELLKEMVVKVKL PRQGTI NVVAALR NRE+RRAVEIIELLE++SH+VGFESYELLVEGCL+CREYILAGKV 
Subjt:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV

Query:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS
        MGMT RGFIPYI+VRQ+VVEGLA +GEVELASAVRRRF EL S
Subjt:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS

A0A5D3D4C7 Pentatricopeptide repeat-containing protein3.6e-14681.05Show/hide
Query:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL
        M  G T  SAFLL FH FL Q SSIH+ISPSQTLQ+SIKAAVESK YKKLP LFPSL++AC NP+ F FLST P+N  TQVVDEILQSLI +RPRS+ Q 
Subjt:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL

Query:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA
        V+ SLLFYTLQSPSP PLSLPVLQRILHSGCVP+PQTH LLSSAWLKQR Q+KSVANIL+DM+SIGY+PDS+ICNYLISSLC+I ELAEA QVLK MGGA
Subjt:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA

Query:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV
        GC+PDLESYGTLI A+TAVRRT +AVELLKEMVVKVKL PRQ TIINVVAALRANRE+RRAVEIIELLE++SH+VGFESYELLVEGCL+CREYILAGKV+
Subjt:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV

Query:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS
        M MT RGFIPYI+VRQKVVEGL  +GE+ELASAVRRRF EL S
Subjt:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS

A0A6J1CIR0 pentatricopeptide repeat-containing protein At1g062701.8e-18299.71Show/hide
Query:  MKTGTTNFSAFLLFHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLV
        MKTGTTNFSAFLLFHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLV
Subjt:  MKTGTTNFSAFLLFHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLV

Query:  YASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAG
        YASLLFYTLQSPSPLPLSL VLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAG
Subjt:  YASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAG

Query:  CIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVM
        CIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVM
Subjt:  CIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVM

Query:  GMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS
        GMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS
Subjt:  GMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS

A0A6J1G5M7 pentatricopeptide repeat-containing protein At1g062701.4e-15886.59Show/hide
Query:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL
        MK GT   S+FLL FHQFLRQ SS+ +I+P+Q+LQESI+AAVESK Y+KLPDLFPSL++ACQNP+PFSFLST PVNF T VVDEILQSLIPLRPRSRPQ 
Subjt:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL

Query:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA
        V+ASLLFYTLQSPSPLPLSLPVLQRILHSGCVP PQTHLLLSS WLKQR QSKSVA+ILL+MRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MGGA
Subjt:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA

Query:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV
        GC+PDLESYGTLI +STAVRRT EAVELLKEMVVKVKLTPRQGT+INVVAALRANREIRRAVEIIELLEKES+NVGFESYE+LVEGCL+CREYILAGKVV
Subjt:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV

Query:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS
        MGMT++G+IPYIRVR KVVEGLA +GE ELASAVRRRFAELRS
Subjt:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS

A0A6J1I5P5 pentatricopeptide repeat-containing protein At1g062709.7e-16087.46Show/hide
Query:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL
        MK GT   S+FLL FHQFLR  SS+ +I+P+QTLQESIKAAVESK YKKLPDLFPSL++ACQNP+PFSFLST PVNF TQVVDEILQSLIPLRPRSRPQ 
Subjt:  MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQL

Query:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA
        V+ASLLFYTLQSPSPLPLSLPVLQRILHSGC P PQTHLLLSSAWLKQR QSKSVA+ILLDMRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MGGA
Subjt:  VYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGA

Query:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV
        GC+PDLESYGTLI +STAVRRT EAVELLKEMVVKVKLTPR+GT+INVVAALRANREIRRAVEIIELLEKES+NVGFESYE+LVEGCL+CREYILAGKVV
Subjt:  GCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV

Query:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS
        MGMT++G+IPYIRVR KVVEGLA +GE ELASAVRRRFAELRS
Subjt:  MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS

SwissProt top hitse value%identityAlignment
Q0WPZ6 Pentatricopeptide repeat-containing protein At2g171405.7e-0823.94Show/hide
Query:  PQLVYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQT-HLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLK-
        P  V    L +   S   +  +  +LQ ++ + C+P   T ++LL S W  + G+      +L  M   GY  D+  CN ++  LC   EL +A +++K 
Subjt:  PQLVYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQT-HLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLK-

Query:  -------AMGGAG---------------CIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESH
               A+G  G               C+PDL +Y TL+       R  EA  L  EM+ + KL P        +       +I  A  +++ +EK+  
Subjt:  -------AMGGAG---------------CIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESH

Query:  NVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELAS
        +   E+Y  L+ G     +      ++  M ++G  P I      ++ L +  +VE A+
Subjt:  NVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELAS

Q9CAN0 Pentatricopeptide repeat-containing protein At1g63130, mitochondrial7.0e-0623.24Show/hide
Query:  LRPRSRPQLVYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEAS
        ++ R  P +V  S L   +   +   L + + +++ + G      T+ +L + + ++   S ++A +L  M  +GYEPD    N L++  C  + +++A 
Subjt:  LRPRSRPQLVYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEAS

Query:  QVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCR
         ++  M   G  PD  ++ TLI       R  EAV L+  MVVK    P   T   VV  L    +I  A+ +++ +E+     G   Y  +++   + +
Subjt:  QVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCR

Query:  EYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELAS
            A  +   M  +G  P +     ++  L + G    AS
Subjt:  EYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELAS

Q9LFF1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic8.5e-1231.25Show/hide
Query:  DMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRR
        +MRS G EPD    N LI SLC+  +L EA  +LK M  +GC   + +Y TLI       +TREA E+  EM V   ++    T   ++  L  +R +  
Subjt:  DMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRR

Query:  AVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRR
        A ++++ +  E       +Y  L+       +   A  +V  MT  G  P I     ++ GL   G VE+AS + R
Subjt:  AVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRR

Q9LNC0 Pentatricopeptide repeat-containing protein At1g062701.2e-9556.78Show/hide
Query:  TISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLVYASLLFYTLQSPSPLPLSLPVLQRI
        +IS  + ++++IK AVE+K Y ++P+L  SL++  QN + FSFLS    +   +V+DEILQS +P+RPRS P++VY+SLL Y LQS  PLPLS  +LQR 
Subjt:  TISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLVYASLLFYTLQSPSPLPLSLPVLQRI

Query:  LHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAV
        L SGC+P PQTHLLLS AWL++R  S+SVA+I+ +M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGCIPD+ESYG +I +    R+T + V
Subjt:  LHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAV

Query:  ELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVG
        +++KEMV K  ++PR+G +  V AALRANREI +A+E+IE +E   + V FESYE++VEGCL+ REYILAGKVVM MT RGFIPYI+VRQKVVE L ++G
Subjt:  ELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVG

Query:  EVELASAVRRRFAELRS
        E +LA  VR+R +ELRS
Subjt:  EVELASAVRRRFAELRS

Q9M302 Pentatricopeptide repeat-containing protein At3g488101.7e-0724.38Show/hide
Query:  PQLVYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQT-HLLLSSAWLKQRGQSKSVANILLDM-RSIGYEPDSSICNYLISSLCAIDELAEASQVLK
        P ++  S L   L +   + L+   L ++L  GC P   T   L+   +L  RG +    ++   M R  G +P+    N L+   C+   + +A  V  
Subjt:  PQLVYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQT-HLLLSSAWLKQRGQSKSVANILLDM-RSIGYEPDSSICNYLISSLCAIDELAEASQVLK

Query:  AMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYIL
         M   GC P++ +YG+LI           AV +  +M+      P      N+V AL  + + + A  +IE++ KE+      ++   ++G  D      
Subjt:  AMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYIL

Query:  AGKVVMGMTKRGFI-PYIRVRQKVVEGLADVGEVELASAVRR
        A KV   M ++    P I    ++++GLA    +E A  + R
Subjt:  AGKVVMGMTKRGFI-PYIRVRQKVVEGLADVGEVELASAVRR

Arabidopsis top hitse value%identityAlignment
AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein8.8e-9756.78Show/hide
Query:  TISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLVYASLLFYTLQSPSPLPLSLPVLQRI
        +IS  + ++++IK AVE+K Y ++P+L  SL++  QN + FSFLS    +   +V+DEILQS +P+RPRS P++VY+SLL Y LQS  PLPLS  +LQR 
Subjt:  TISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLVYASLLFYTLQSPSPLPLSLPVLQRI

Query:  LHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAV
        L SGC+P PQTHLLLS AWL++R  S+SVA+I+ +M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGCIPD+ESYG +I +    R+T + V
Subjt:  LHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAV

Query:  ELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVG
        +++KEMV K  ++PR+G +  V AALRANREI +A+E+IE +E   + V FESYE++VEGCL+ REYILAGKVVM MT RGFIPYI+VRQKVVE L ++G
Subjt:  ELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVG

Query:  EVELASAVRRRFAELRS
        E +LA  VR+R +ELRS
Subjt:  EVELASAVRRRFAELRS

AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.0e-0723.24Show/hide
Query:  LRPRSRPQLVYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEAS
        ++ R  P +V  S L   +   +   L + + +++ + G      T+ +L + + ++   S ++A +L  M  +GYEPD    N L++  C  + +++A 
Subjt:  LRPRSRPQLVYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEAS

Query:  QVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCR
         ++  M   G  PD  ++ TLI       R  EAV L+  MVVK    P   T   VV  L    +I  A+ +++ +E+     G   Y  +++   + +
Subjt:  QVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCR

Query:  EYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELAS
            A  +   M  +G  P +     ++  L + G    AS
Subjt:  EYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELAS

AT2G17140.1 Pentatricopeptide repeat (PPR) superfamily protein4.1e-0923.94Show/hide
Query:  PQLVYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQT-HLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLK-
        P  V    L +   S   +  +  +LQ ++ + C+P   T ++LL S W  + G+      +L  M   GY  D+  CN ++  LC   EL +A +++K 
Subjt:  PQLVYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQT-HLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLK-

Query:  -------AMGGAG---------------CIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESH
               A+G  G               C+PDL +Y TL+       R  EA  L  EM+ + KL P        +       +I  A  +++ +EK+  
Subjt:  -------AMGGAG---------------CIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESH

Query:  NVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELAS
        +   E+Y  L+ G     +      ++  M ++G  P I      ++ L +  +VE A+
Subjt:  NVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELAS

AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein1.2e-0824.38Show/hide
Query:  PQLVYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQT-HLLLSSAWLKQRGQSKSVANILLDM-RSIGYEPDSSICNYLISSLCAIDELAEASQVLK
        P ++  S L   L +   + L+   L ++L  GC P   T   L+   +L  RG +    ++   M R  G +P+    N L+   C+   + +A  V  
Subjt:  PQLVYASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQT-HLLLSSAWLKQRGQSKSVANILLDM-RSIGYEPDSSICNYLISSLCAIDELAEASQVLK

Query:  AMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYIL
         M   GC P++ +YG+LI           AV +  +M+      P      N+V AL  + + + A  +IE++ KE+      ++   ++G  D      
Subjt:  AMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYIL

Query:  AGKVVMGMTKRGFI-PYIRVRQKVVEGLADVGEVELASAVRR
        A KV   M ++    P I    ++++GLA    +E A  + R
Subjt:  AGKVVMGMTKRGFI-PYIRVRQKVVEGLADVGEVELASAVRR

AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein6.1e-1331.25Show/hide
Query:  DMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRR
        +MRS G EPD    N LI SLC+  +L EA  +LK M  +GC   + +Y TLI       +TREA E+  EM V   ++    T   ++  L  +R +  
Subjt:  DMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRR

Query:  AVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRR
        A ++++ +  E       +Y  L+       +   A  +V  MT  G  P I     ++ GL   G VE+AS + R
Subjt:  AVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACTGGAACAACAAATTTTTCTGCGTTCTTACTATTCCATCAATTTTTGCGGCAATATTCTTCTATCCACACAATATCTCCATCACAGACCCTTCAAGAAAGCAT
TAAAGCTGCAGTTGAATCAAAGTTGTATAAGAAACTACCAGATTTGTTTCCTTCTTTGCGAGATGCTTGCCAAAACCCCAGTCCTTTCTCGTTTCTCTCTACCCTTCCTG
TTAACTTCACAACACAAGTTGTGGATGAGATATTGCAGTCTTTAATCCCTCTCAGACCTCGCTCAAGGCCCCAGCTTGTCTATGCCTCTCTGCTTTTCTACACTCTTCAA
AGCCCTTCACCGCTTCCCCTCTCTCTTCCTGTCCTCCAGCGGATTCTCCACTCTGGTTGTGTCCCTGCCCCACAGACCCACCTACTCCTCTCTTCTGCATGGCTAAAACA
GCGTGGCCAGTCTAAGTCTGTTGCTAATATCTTGCTGGACATGCGATCAATTGGATACGAGCCTGACAGCAGCATATGTAATTATCTTATATCCTCCCTTTGTGCCATTG
ATGAGTTAGCAGAGGCTTCTCAAGTTTTGAAGGCTATGGGAGGGGCAGGATGCATTCCTGACTTGGAGAGTTACGGCACTTTAATTGGTGCATCAACAGCAGTTAGACGG
ACACGCGAGGCAGTGGAATTACTGAAAGAAATGGTAGTAAAAGTTAAATTGACACCAAGACAAGGAACAATTATCAATGTAGTGGCTGCATTACGAGCAAACCGAGAGAT
AAGGAGAGCAGTTGAGATCATTGAGCTCTTGGAGAAGGAGAGCCACAATGTTGGATTTGAGAGCTATGAGCTCCTCGTTGAGGGTTGTCTGGACTGCCGTGAGTATATTT
TAGCTGGAAAGGTGGTCATGGGGATGACAAAGAGAGGGTTTATACCCTACATCAGGGTTAGGCAAAAGGTTGTTGAGGGGCTGGCTGATGTGGGAGAAGTGGAACTGGCT
TCTGCTGTGAGACGCAGATTTGCAGAATTGAGATCT
mRNA sequenceShow/hide mRNA sequence
ATGAAAACTGGAACAACAAATTTTTCTGCGTTCTTACTATTCCATCAATTTTTGCGGCAATATTCTTCTATCCACACAATATCTCCATCACAGACCCTTCAAGAAAGCAT
TAAAGCTGCAGTTGAATCAAAGTTGTATAAGAAACTACCAGATTTGTTTCCTTCTTTGCGAGATGCTTGCCAAAACCCCAGTCCTTTCTCGTTTCTCTCTACCCTTCCTG
TTAACTTCACAACACAAGTTGTGGATGAGATATTGCAGTCTTTAATCCCTCTCAGACCTCGCTCAAGGCCCCAGCTTGTCTATGCCTCTCTGCTTTTCTACACTCTTCAA
AGCCCTTCACCGCTTCCCCTCTCTCTTCCTGTCCTCCAGCGGATTCTCCACTCTGGTTGTGTCCCTGCCCCACAGACCCACCTACTCCTCTCTTCTGCATGGCTAAAACA
GCGTGGCCAGTCTAAGTCTGTTGCTAATATCTTGCTGGACATGCGATCAATTGGATACGAGCCTGACAGCAGCATATGTAATTATCTTATATCCTCCCTTTGTGCCATTG
ATGAGTTAGCAGAGGCTTCTCAAGTTTTGAAGGCTATGGGAGGGGCAGGATGCATTCCTGACTTGGAGAGTTACGGCACTTTAATTGGTGCATCAACAGCAGTTAGACGG
ACACGCGAGGCAGTGGAATTACTGAAAGAAATGGTAGTAAAAGTTAAATTGACACCAAGACAAGGAACAATTATCAATGTAGTGGCTGCATTACGAGCAAACCGAGAGAT
AAGGAGAGCAGTTGAGATCATTGAGCTCTTGGAGAAGGAGAGCCACAATGTTGGATTTGAGAGCTATGAGCTCCTCGTTGAGGGTTGTCTGGACTGCCGTGAGTATATTT
TAGCTGGAAAGGTGGTCATGGGGATGACAAAGAGAGGGTTTATACCCTACATCAGGGTTAGGCAAAAGGTTGTTGAGGGGCTGGCTGATGTGGGAGAAGTGGAACTGGCT
TCTGCTGTGAGACGCAGATTTGCAGAATTGAGATCT
Protein sequenceShow/hide protein sequence
MKTGTTNFSAFLLFHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDACQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLVYASLLFYTLQ
SPSPLPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISSLCAIDELAEASQVLKAMGGAGCIPDLESYGTLIGASTAVRR
TREAVELLKEMVVKVKLTPRQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVVMGMTKRGFIPYIRVRQKVVEGLADVGEVELA
SAVRRRFAELRS