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MS004930 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004930
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationscaffold176:1480390..1480811
RNA-Seq ExpressionMS004930
SyntenyMS004930
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652269.1 hypothetical protein Csa_021983 [Cucumis sativus]2.0e-3490.22Show/hide
Query:  MASLGARSVFRSFSGSARRAAAHIGSEARA-SSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEGA
        MAS+GARS FRSFSGSARRAAAHIGS+ +A SSSPFRMATNKPLSHRTFRCA EMSFCLESMMPFHS SSSALMTSMLSISR+SCGWLPEGA
Subjt:  MASLGARSVFRSFSGSARRAAAHIGSEARA-SSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEGA

KAG7010763.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-3490.22Show/hide
Query:  MASLGARSVFRSFSGSARRAAAHIGSEARASSS-PFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEGA
        MAS+GARSVFRSFSGSARRAAA IGS+A++SSS PFRMAT KPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLS+SR+SCGWLPEGA
Subjt:  MASLGARSVFRSFSGSARRAAAHIGSEARASSS-PFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEGA

XP_022140726.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Momordica charantia]6.1e-39100Show/hide
Query:  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
        MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
Subjt:  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG

XP_022140727.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Momordica charantia]3.0e-38100Show/hide
Query:  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPE
        MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPE
Subjt:  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPE

XP_022140728.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Momordica charantia]6.1e-39100Show/hide
Query:  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
        MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
Subjt:  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG

TrEMBL top hitse value%identityAlignment
A0A0A0LN06 Uncharacterized protein9.9e-3590.22Show/hide
Query:  MASLGARSVFRSFSGSARRAAAHIGSEARA-SSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEGA
        MAS+GARS FRSFSGSARRAAAHIGS+ +A SSSPFRMATNKPLSHRTFRCA EMSFCLESMMPFHS SSSALMTSMLSISR+SCGWLPEGA
Subjt:  MASLGARSVFRSFSGSARRAAAHIGSEARA-SSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEGA

A0A6J1CGX5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X13.0e-39100Show/hide
Query:  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
        MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
Subjt:  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG

A0A6J1CHV9 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.5e-38100Show/hide
Query:  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPE
        MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPE
Subjt:  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPE

A0A6J1CIN8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X33.0e-39100Show/hide
Query:  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
        MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
Subjt:  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG

A0A6J1I155 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X22.2e-3490.11Show/hide
Query:  MASLGARSVFRSFSGSARRAAAHIGSEARASS-SPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
        MAS+GARSVFRSFSGSARRAAAHIGS+AR+SS SPFRMATNKPLSHRTFRCAAEMSFCLES+MPFHSASS+A+M SMLSISR SCGWLPEG
Subjt:  MASLGARSVFRSFSGSARRAAAHIGSEARASS-SPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial4.4e-0844.32Show/hide
Query:  GARSVFRSFSGSARRAAAHIG---SEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPE
        GARS+ R  + S+R AAA  G   S+A+++   FR    +       R   E+SFC+ES++P+HSA++SALMTS LSIS  + GWL +
Subjt:  GARSVFRSFSGSARRAAAHIG---SEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein2.2e-1041.57Show/hide
Query:  ARSVFRSFSGSARRAAAHIGSEAR----ASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
        ARSVFRS +  A   A    +  +    ++ + FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSVFRSFSGSARRAAAHIGSEAR----ASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG

AT1G28395.2 unknown protein2.2e-1041.57Show/hide
Query:  ARSVFRSFSGSARRAAAHIGSEAR----ASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
        ARSVFRS +  A   A    +  +    ++ + FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSVFRSFSGSARRAAAHIGSEAR----ASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG

AT1G28395.3 unknown protein2.2e-1041.57Show/hide
Query:  ARSVFRSFSGSARRAAAHIGSEAR----ASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
        ARSVFRS +  A   A    +  +    ++ + FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSVFRSFSGSARRAAAHIGSEAR----ASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG

AT2G20585.3 nuclear fusion defective 66.4e-1044.94Show/hide
Query:  GARSVFRSFSGSARRAAAHIG---SEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
        GARS+ R  + S+R AAA  G   S+A+++   FR    +       R   E+SFC+ES++P+HSA++SALMTS LSIS  + GWL +G
Subjt:  GARSVFRSFSGSARRAAAHIG---SEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG

AT2G33847.2 unknown protein4.9e-1046.51Show/hide
Query:  ARSVFRSFSGSARRAAAHIGSEARASS-SPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG
        ARSVFRS  G A  AA        +S+ S F++    PLSHR FR   E+S C+E+M+P+H+A++SAL+ SMLS+S  S  W  +G
Subjt:  ARSVFRSFSGSARRAAAHIGSEARASS-SPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCACTTGGCGCTAGGTCTGTTTTCCGGTCATTTTCCGGTTCCGCACGCCGTGCTGCTGCTCATATCGGTTCTGAAGCCCGGGCGTCAAGCTCTCCCTTTCGCAT
GGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCAGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCGTTTCACTCTGCGTCGTCGTCAGCTTTGATGA
CTTCAATGCTCTCTATTTCGCGTAACAGCTGTGGTTGGCTTCCCGAAGGTGCG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCACTTGGCGCTAGGTCTGTTTTCCGGTCATTTTCCGGTTCCGCACGCCGTGCTGCTGCTCATATCGGTTCTGAAGCCCGGGCGTCAAGCTCTCCCTTTCGCAT
GGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCAGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCGTTTCACTCTGCGTCGTCGTCAGCTTTGATGA
CTTCAATGCTCTCTATTTCGCGTAACAGCTGTGGTTGGCTTCCCGAAGGTGCG
Protein sequenceShow/hide protein sequence
MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEGA