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MS004935 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004935
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionalpha-xylosidase 1-like
Genome locationscaffold176:1562046..1562144
RNA-Seq ExpressionMS004935
SyntenyMS004935
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032505.1 Alpha-xylosidase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-0890.91Show/hide
Query:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
        LEDGGDKRKTAMVEVKGL+L VGKNFE+SWKMG
Subjt:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
XP_008445661.1 PREDICTED: alpha-xylosidase 1 [Cucumis melo]5.3e-0993.94Show/hide
Query:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
        LEDGGDKRKTAMVEV+GL+LPVGKNFEISWKMG
Subjt:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
XP_022135774.1 alpha-xylosidase 1-like [Momordica charantia]8.2e-10100Show/hide
Query:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
        LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
Subjt:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
XP_023538636.1 alpha-xylosidase 1-like [Cucurbita pepo subsp. pepo]2.6e-0890.91Show/hide
Query:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
        LEDGGDKRKTAMVEVKGL+L VGKNFE+SWKMG
Subjt:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
XP_038884979.1 alpha-xylosidase 1-like [Benincasa hispida]7.0e-0990.91Show/hide
Query:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
        LEDGGDKRKTAMVEV+GL+LPVGKNFE+SWKMG
Subjt:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
TrEMBL top hitse value%identityAlignment
A0A1S3BD87 alpha-xylosidase 12.6e-0993.94Show/hide
Query:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
        LEDGGDKRKTAMVEV+GL+LPVGKNFEISWKMG
Subjt:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
A0A5A7VEC9 Alpha-xylosidase 12.6e-0993.94Show/hide
Query:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
        LEDGGDKRKTAMVEV+GL+LPVGKNFEISWKMG
Subjt:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
A0A6J1C2F6 alpha-xylosidase 1-like4.0e-10100Show/hide
Query:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
        LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
Subjt:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
A0A6J1HBY5 alpha-xylosidase 1-like1.3e-0890.91Show/hide
Query:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
        LEDGGDKRKTAMVEVKGL+L VGKNFE+SWKMG
Subjt:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
A0A6J1I9G5 alpha-xylosidase 1-like1.3e-0890.91Show/hide
Query:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
        LEDGGDKRKTAMVEVKGL+L VGKNFE+SWKMG
Subjt:  LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68560.1 alpha-xylosidase 12.5e-0457.14Show/hide
Query:  DKRKTAMVEVKGLTLPVGKNFEISWKMG
        ++ K+ MVEV+GL + VGK+F +SWKMG
Subjt:  DKRKTAMVEVKGLTLPVGKNFEISWKMG
AT3G45940.1 Glycosyl hydrolases family 31 protein5.5e-0461.29Show/hide
Query:  EDGGDKRKTAMVEVKGLTLPVGKNFEISWKM
        ED G+  K+ MVE+KGL + VGK+F ISWKM
Subjt:  EDGGDKRKTAMVEVKGLTLPVGKNFEISWKM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTAGAAGATGGAGGGGACAAGAGGAAAACTGCCATGGTAGAGGTCAAGGGATTGACATTGCCTGTTGGTAAGAACTTTGAAATCTCCTGGAAAATGGGA
mRNA sequenceShow/hide mRNA sequence
CTAGAAGATGGAGGGGACAAGAGGAAAACTGCCATGGTAGAGGTCAAGGGATTGACATTGCCTGTTGGTAAGAACTTTGAAATCTCCTGGAAAATGGGA
Protein sequenceShow/hide protein sequence
LEDGGDKRKTAMVEVKGLTLPVGKNFEISWKMG