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MS004939 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004939
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold176:1580435..1581313
RNA-Seq ExpressionMS004939
SyntenyMS004939
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604899.1 hypothetical protein SDJN03_02216, partial [Cucurbita argyrosperma subsp. sororia]1.6e-6069.95Show/hide
Query:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
        MA+L ++ AV RGG+GVYVAAVPLRAT+GPAQLLASAAYSFN WDLQHFMVIIAPSSP   SQALVFDFQP+DPEDIQVALAALSGKAVPGVV ERKLSR
Subjt:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR

Query:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI
        LP+ KC +IG+ EAN +E+ARKFN SWD NL+IGHHDCR YTN                         GLVEALLGEENVL    LR+NS SI
Subjt:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI

XP_022140714.1 uncharacterized protein LOC111011312 isoform X1 [Momordica charantia]7.5e-10399.48Show/hide
Query:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
        MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
Subjt:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR

Query:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI
        LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGN SSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI
Subjt:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI

XP_022140717.1 uncharacterized protein LOC111011312 isoform X2 [Momordica charantia]5.4e-8587.05Show/hide
Query:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
        MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
Subjt:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR

Query:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI
        LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTN                         GLVEALLGEENVLARLRLRRNSSSI
Subjt:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI

XP_022948039.1 uncharacterized protein LOC111451737 [Cucurbita moschata]8.3e-6269.95Show/hide
Query:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
        MA+L ++ AV RGG+GVYVAAVPLRAT+GPAQLLASAAYSFN WDLQHFMVIIAPSSP   SQALVFDFQP+DPEDIQVALAALSGKAVPGVV ERKLSR
Subjt:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR

Query:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI
        LP+ KC +IG+ EAN +E+ARKFN SWD NL+IGHHDCR YTN                         GLVEALLGEENVL    LR+NS SI
Subjt:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI

XP_023534339.1 uncharacterized protein LOC111795930 [Cucurbita pepo subsp. pepo]2.4e-6169.43Show/hide
Query:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
        MA+L ++ AV RGG+GVYVAAVPLRAT+GPAQLLASAAYSFN WDLQHFMVIIAPSSP   SQALVFDFQP+DPEDIQVALA LSGKAVPGVV ERKLSR
Subjt:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR

Query:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI
        LP+ KC +IG+ EAN +E+ARKFN SWD NL+IGHHDCR YTN                         GLVEALLGEENVL    LR+NS SI
Subjt:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI

TrEMBL top hitse value%identityAlignment
A0A5D3CK24 Uncharacterized protein1.6e-5867.35Show/hide
Query:  MASLSTES--AVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIA-PSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERK
        MA+L T+S  AV R G+GVYVAAVPLRAT+GPAQLLASAAYSFN WD QHFMVIIA PSSP  HSQALVFDFQP+DPEDIQVALAALSGK VPGVV ERK
Subjt:  MASLSTES--AVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIA-PSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERK

Query:  LSRLPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI
        LSRLPR KC ++G   A+ +E+ARKFN +WD NLRIGHHDCR YTN                         GLVE LLGEENVL   RLR+NS +I
Subjt:  LSRLPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI

A0A6J1CGG4 uncharacterized protein LOC111011312 isoform X13.6e-10399.48Show/hide
Query:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
        MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
Subjt:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR

Query:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI
        LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGN SSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI
Subjt:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI

A0A6J1CHU7 uncharacterized protein LOC111011312 isoform X22.6e-8587.05Show/hide
Query:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
        MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
Subjt:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR

Query:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI
        LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTN                         GLVEALLGEENVLARLRLRRNSSSI
Subjt:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI

A0A6J1G8N3 uncharacterized protein LOC1114517374.0e-6269.95Show/hide
Query:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
        MA+L ++ AV RGG+GVYVAAVPLRAT+GPAQLLASAAYSFN WDLQHFMVIIAPSSP   SQALVFDFQP+DPEDIQVALAALSGKAVPGVV ERKLSR
Subjt:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR

Query:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI
        LP+ KC +IG+ EAN +E+ARKFN SWD NL+IGHHDCR YTN                         GLVEALLGEENVL    LR+NS SI
Subjt:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI

A0A6J1I2F2 uncharacterized protein LOC1114698848.4e-6068.39Show/hide
Query:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR
        M +L ++ AV RGG+GVYVAAVPLRAT+GPAQLLASAAYSFN WDLQHFMVIIAP SP   SQALVFDFQP+DPEDIQVALAALSGKAVPGVV ERKLSR
Subjt:  MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSR

Query:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI
        LP+ KC +IG+ EAN +E+ARKFN SWD NL+IG HDCR YTN                         GLVEALLGEENVL    LR+NS SI
Subjt:  LPRKKCWHIGTCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04790.1 unknown protein1.1e-4055.1Show/hide
Query:  MASLSTES--AVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKL
        MASL T S    +  G+ +YVAAVPL+A  GP QL+ S AYS N  +LQHFMV+I PSS P   + LVFDFQP +PE I+ A++ LSG  +PGVVL+R+L
Subjt:  MASLSTES--AVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKL

Query:  SRLPRKKCWHIGTCEAN-GIEMARKFNGSWDLNLRIGHHDCRHYTNG
          +PR++CW +G  + N  +EMA +FN SW+ +LR+G HDCRHYTNG
Subjt:  SRLPRKKCWHIGTCEAN-GIEMARKFNGSWDLNLRIGHHDCRHYTNG

AT2G04790.2 unknown protein5.6e-4054.79Show/hide
Query:  MASLSTES--AVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKL
        MASL T S    +  G+ +YVAAVPL+A  GP QL+ S AYS N  +LQHFMV+I PSS P   + LVFDFQP +PE I+ A++ LSG  +PGVVL+R+L
Subjt:  MASLSTES--AVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKL

Query:  SRLPRKKCWHIGTCEAN-GIEMARKFNGSWDLNLRIGHHDCRHYTN
          +PR++CW +G  + N  +EMA +FN SW+ +LR+G HDCRHYTN
Subjt:  SRLPRKKCWHIGTCEAN-GIEMARKFNGSWDLNLRIGHHDCRHYTN

AT2G04790.3 unknown protein2.5e-1954.84Show/hide
Query:  MASLSTES--AVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPG
        MASL T S    +  G+ +YVAAVPL+A  GP QL+ S AYS N  +LQHFMV+I PSS P   + LVFDFQP +PE I+ A++ LSG  +PG
Subjt:  MASLSTES--AVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPG

AT2G04790.4 unknown protein2.5e-1954.84Show/hide
Query:  MASLSTES--AVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPG
        MASL T S    +  G+ +YVAAVPL+A  GP QL+ S AYS N  +LQHFMV+I PSS P   + LVFDFQP +PE I+ A++ LSG  +PG
Subjt:  MASLSTES--AVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTCTGTCCACGGAATCGGCGGTGGCGAGAGGCGGAGAAGGCGTGTATGTGGCGGCAGTGCCCCTAAGAGCCACCAGAGGCCCTGCCCAATTGCTTGCTTCTGC
TGCTTACTCTTTCAACAACTGGGATTTGCAGCATTTTATGGTTATCATCGCACCCTCATCCCCTCCTCCTCATTCTCAGGCTTTGGTCTTTGATTTTCAACCTGAAGATC
CGGAAGATATACAAGTCGCACTGGCTGCTCTTTCTGGAAAAGCAGTACCAGGGGTTGTTCTCGAGAGGAAGTTGTCGAGGCTGCCAAGAAAGAAATGTTGGCACATTGGA
ACTTGTGAAGCGAACGGCATAGAAATGGCACGCAAGTTCAACGGAAGTTGGGACTTGAATTTGAGGATTGGTCACCATGACTGCAGACACTACACAAATGGTAACAGAAG
TTCATTTCTTGTGTCTATCTTCTTAAAATCGATATCTAAACTTTGTTGTTTGCGAGGTTTGGAAGGCTTGGTTGAGGCTCTGCTTGGTGAAGAAAATGTGTTGGCGCGCC
TACGCCTAAGGCGGAATTCGTCAAGCATA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCTCTGTCCACGGAATCGGCGGTGGCGAGAGGCGGAGAAGGCGTGTATGTGGCGGCAGTGCCCCTAAGAGCCACCAGAGGCCCTGCCCAATTGCTTGCTTCTGC
TGCTTACTCTTTCAACAACTGGGATTTGCAGCATTTTATGGTTATCATCGCACCCTCATCCCCTCCTCCTCATTCTCAGGCTTTGGTCTTTGATTTTCAACCTGAAGATC
CGGAAGATATACAAGTCGCACTGGCTGCTCTTTCTGGAAAAGCAGTACCAGGGGTTGTTCTCGAGAGGAAGTTGTCGAGGCTGCCAAGAAAGAAATGTTGGCACATTGGA
ACTTGTGAAGCGAACGGCATAGAAATGGCACGCAAGTTCAACGGAAGTTGGGACTTGAATTTGAGGATTGGTCACCATGACTGCAGACACTACACAAATGGTAACAGAAG
TTCATTTCTTGTGTCTATCTTCTTAAAATCGATATCTAAACTTTGTTGTTTGCGAGGTTTGGAAGGCTTGGTTGAGGCTCTGCTTGGTGAAGAAAATGTGTTGGCGCGCC
TACGCCTAAGGCGGAATTCGTCAAGCATA
Protein sequenceShow/hide protein sequence
MASLSTESAVARGGEGVYVAAVPLRATRGPAQLLASAAYSFNNWDLQHFMVIIAPSSPPPHSQALVFDFQPEDPEDIQVALAALSGKAVPGVVLERKLSRLPRKKCWHIG
TCEANGIEMARKFNGSWDLNLRIGHHDCRHYTNGNRSSFLVSIFLKSISKLCCLRGLEGLVEALLGEENVLARLRLRRNSSSI