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MS004941 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004941
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold176:1590601..1590912
RNA-Seq ExpressionMS004941
SyntenyMS004941
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053319.1 uncharacterized protein E6C27_scaffold102G001420 [Cucumis melo var. makuwa]2.7e-2258.56Show/hide
Query:  MWRLMIAAIRPSFHNSRNSHRVADESMF-PPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQLM
        MWR + A IRP+ HN  NSHR+ADESMF    + P YA AA+  RT +    + IF IIRAPFSILSCFA P VH   DAFW+S DH+     S+ N LM
Subjt:  MWRLMIAAIRPSFHNSRNSHRVADESMF-PPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQLM

Query:  VSDGMRYAIFM
        VSDGMRYAI M
Subjt:  VSDGMRYAIFM
XP_008455967.1 PREDICTED: uncharacterized protein LOC103496030 [Cucumis melo]5.9e-2257.66Show/hide
Query:  MWRLMIAAIRPSFHNSRNSHRVADESMF-PPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQLM
        MWR + A IRP+ HN  N+HR+ADESMF    + P YA AA+  RT +    + IF IIRAPFSILSCFA P VH   DAFW+S DH+     S+ N LM
Subjt:  MWRLMIAAIRPSFHNSRNSHRVADESMF-PPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQLM

Query:  VSDGMRYAIFM
        VSDGMRYAI M
Subjt:  VSDGMRYAIFM
XP_022944204.1 uncharacterized protein LOC111448722 [Cucurbita moschata]2.5e-2863.39Show/hide
Query:  MWRLMIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRH--RTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQL
        MWRL IAA+RP+ HN  NSHRVADESMF   E PIYA A   H  R   HRT + +F+IIRAPFSILSCFA PPVH  AD FW+S DH+     S+ N L
Subjt:  MWRLMIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRH--RTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQL

Query:  MVSDGMRYAIFM
        MVSDGMRYA+ M
Subjt:  MVSDGMRYAIFM
XP_022985817.1 uncharacterized protein LOC111483748 [Cucurbita maxima]2.3e-2965.18Show/hide
Query:  MWRLMIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRH--RTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQL
        MWRL IAA+RP+ HN  NSHRVADESMF   E PIYA A   H  R   HRTFS +F+IIRAPFSILSCFA PPVH  AD FW+S DH+     S+ N L
Subjt:  MWRLMIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRH--RTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQL

Query:  MVSDGMRYAIFM
        MVSDGMRYA+ M
Subjt:  MVSDGMRYAIFM
XP_023513038.1 uncharacterized protein LOC111777603 [Cucurbita pepo subsp. pepo]2.9e-2964.6Show/hide
Query:  MWRLMIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRH---RTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQ
        MWRL IAA+RP+ HN  NSHRVADESMF   E PIYA A   H   R   HRTFS +F+IIRAPFSILSCFA PPVH  AD FW+S DH+     S+ N 
Subjt:  MWRLMIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRH---RTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQ

Query:  LMVSDGMRYAIFM
        LMVSDGMRYA+ M
Subjt:  LMVSDGMRYAIFM
TrEMBL top hitse value%identityAlignment
A0A1S3C290 uncharacterized protein LOC1034960302.9e-2257.66Show/hide
Query:  MWRLMIAAIRPSFHNSRNSHRVADESMF-PPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQLM
        MWR + A IRP+ HN  N+HR+ADESMF    + P YA AA+  RT +    + IF IIRAPFSILSCFA P VH   DAFW+S DH+     S+ N LM
Subjt:  MWRLMIAAIRPSFHNSRNSHRVADESMF-PPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQLM

Query:  VSDGMRYAIFM
        VSDGMRYAI M
Subjt:  VSDGMRYAIFM
A0A5A7UIL8 Uncharacterized protein1.3e-2258.56Show/hide
Query:  MWRLMIAAIRPSFHNSRNSHRVADESMF-PPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQLM
        MWR + A IRP+ HN  NSHR+ADESMF    + P YA AA+  RT +    + IF IIRAPFSILSCFA P VH   DAFW+S DH+     S+ N LM
Subjt:  MWRLMIAAIRPSFHNSRNSHRVADESMF-PPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQLM

Query:  VSDGMRYAIFM
        VSDGMRYAI M
Subjt:  VSDGMRYAIFM
A0A5D3CJA9 Uncharacterized protein2.9e-2257.66Show/hide
Query:  MWRLMIAAIRPSFHNSRNSHRVADESMF-PPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQLM
        MWR + A IRP+ HN  N+HR+ADESMF    + P YA AA+  RT +    + IF IIRAPFSILSCFA P VH   DAFW+S DH+     S+ N LM
Subjt:  MWRLMIAAIRPSFHNSRNSHRVADESMF-PPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQLM

Query:  VSDGMRYAIFM
        VSDGMRYAI M
Subjt:  VSDGMRYAIFM
A0A6J1FWB0 uncharacterized protein LOC1114487221.2e-2863.39Show/hide
Query:  MWRLMIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRH--RTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQL
        MWRL IAA+RP+ HN  NSHRVADESMF   E PIYA A   H  R   HRT + +F+IIRAPFSILSCFA PPVH  AD FW+S DH+     S+ N L
Subjt:  MWRLMIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRH--RTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQL

Query:  MVSDGMRYAIFM
        MVSDGMRYA+ M
Subjt:  MVSDGMRYAIFM
A0A6J1J5Y3 uncharacterized protein LOC1114837481.1e-2965.18Show/hide
Query:  MWRLMIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRH--RTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQL
        MWRL IAA+RP+ HN  NSHRVADESMF   E PIYA A   H  R   HRTFS +F+IIRAPFSILSCFA PPVH  AD FW+S DH+     S+ N L
Subjt:  MWRLMIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRH--RTTTHRTFSLIFTIIRAPFSILSCFAQPPVH-GADAFWVSADHF-----SDANQL

Query:  MVSDGMRYAIFM
        MVSDGMRYA+ M
Subjt:  MVSDGMRYAIFM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04795.1 unknown protein6.6e-1140.2Show/hide
Query:  MIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVHGADAFWVSADH--FSDANQLMVSDGMRYAI
        M++ +R +  N R S RVADES  P        T    H             I++ P SI+SCF+ P V  AD  WVS D+   S+ N LMV DGMRYA+
Subjt:  MIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVHGADAFWVSADH--FSDANQLMVSDGMRYAI

Query:  FM
         M
Subjt:  FM
AT5G35732.1 unknown protein1.3e-1444.12Show/hide
Query:  MIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVHGADAFWVSADH--FSDANQLMVSDGMRYAI
        M++ +R +  N R S RVAD++     ELP   + A        R       I+R PFSI+SCFA P V G D  WVS D+   S+ N LMVSD MRYAI
Subjt:  MIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVHGADAFWVSADH--FSDANQLMVSDGMRYAI

Query:  FM
         M
Subjt:  FM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCGGCTGATGATCGCAGCAATTCGCCCCAGTTTCCACAATTCGAGGAACAGCCACCGCGTAGCCGACGAGAGCATGTTCCCACCACCTGAATTGCCCATCTACGC
CACCGCCGCCGACCGCCACCGAACTACCACTCACCGGACCTTCTCCCTTATCTTCACCATCATTCGCGCCCCTTTCTCTATTCTGTCTTGCTTCGCTCAGCCGCCCGTTC
ACGGCGCCGACGCCTTCTGGGTCTCCGCCGATCATTTTTCCGACGCCAATCAACTCATGGTAAGCGACGGGATGCGCTACGCCATATTCATG
mRNA sequenceShow/hide mRNA sequence
ATGTGGCGGCTGATGATCGCAGCAATTCGCCCCAGTTTCCACAATTCGAGGAACAGCCACCGCGTAGCCGACGAGAGCATGTTCCCACCACCTGAATTGCCCATCTACGC
CACCGCCGCCGACCGCCACCGAACTACCACTCACCGGACCTTCTCCCTTATCTTCACCATCATTCGCGCCCCTTTCTCTATTCTGTCTTGCTTCGCTCAGCCGCCCGTTC
ACGGCGCCGACGCCTTCTGGGTCTCCGCCGATCATTTTTCCGACGCCAATCAACTCATGGTAAGCGACGGGATGCGCTACGCCATATTCATG
Protein sequenceShow/hide protein sequence
MWRLMIAAIRPSFHNSRNSHRVADESMFPPPELPIYATAADRHRTTTHRTFSLIFTIIRAPFSILSCFAQPPVHGADAFWVSADHFSDANQLMVSDGMRYAIFM