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MS004955 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004955
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold176:1693722..1694354
RNA-Seq ExpressionMS004955
SyntenyMS004955
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN46604.1 hypothetical protein Csa_005627 [Cucumis sativus]3.1e-0948.72Show/hide
Query:  DDRTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAAD-------DKTLSVVKETHDDEQEQEQEQGGGNDMISL
        DD+TL    E    N+ +    + DM LS+++ET+ DELE+V+DD TL  +EETQD + +  +       DKTLSVV+ET +D+   EQ+QGG  D ISL
Subjt:  DDRTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAAD-------DKTLSVVKETHDDEQEQEQEQGGGNDMISL

Query:  EELNKKFDEFIRTTRMK
        EELN+K +EFIR  RMK
Subjt:  EELNKKFDEFIRTTRMK

RYR00676.1 hypothetical protein Ahy_B07g088808 [Arachis hypogaea]6.0e-0531.82Show/hide
Query:  MFLLCNSLLVFICLNSRSTVNSLD----GSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELE
        MFLLCN LLVF+ + +RS   S D     S   GE   E+E     V+ + E++ +I E N                 + V EDD  L + +   + E E
Subjt:  MFLLCNSLLVFICLNSRSTVNSLD----GSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELE

Query:  AKDD-----RTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDE-LEAADDKTLSVVKETHDDEQEQEQEQGGGNDMIS
        A+DD     + + V EE H D++ +     V+    + EE  ++E         LFD  E +D+E +  +DD+ LS  +   ++E+E+E+E+   ++M+S
Subjt:  AKDD-----RTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDE-LEAADDKTLSVVKETHDDEQEQEQEQGGGNDMIS

Query:  LEELNKKFDEFIRTTRMKIR
         EELNKKF++FIR  +  +R
Subjt:  LEELNKKFDEFIRTTRMKIR

XP_016165478.1 nuclear polyadenylated RNA-binding protein 3 [Arachis ipaensis]6.0e-0531.82Show/hide
Query:  MFLLCNSLLVFICLNSRSTVNSLD----GSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELE
        MFLLCN LLVF+ + +RS   S D     S   GE   E+E     V+ + E++ +I E N                 + V EDD  L + +   + E E
Subjt:  MFLLCNSLLVFICLNSRSTVNSLD----GSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELE

Query:  AKDD-----RTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDE-LEAADDKTLSVVKETHDDEQEQEQEQGGGNDMIS
        A+DD     + + V EE H D++ +     V+    + EE  ++E         LFD  E +D+E +  +DD+ LS  +   ++E+E+E+E+   ++M+S
Subjt:  AKDD-----RTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDE-LEAADDKTLSVVKETHDDEQEQEQEQGGGNDMIS

Query:  LEELNKKFDEFIRTTRMKIR
         EELNKKF++FIR  +  +R
Subjt:  LEELNKKFDEFIRTTRMKIR

XP_022140625.1 uncharacterized protein LOC111011235 [Momordica charantia]2.5e-9997.63Show/hide
Query:  MFLLCNSLLVFICLNSRSTVNSLDGSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELEAKDD
        MFLLCNSLLVFICLNS STVNSLDGSRTVGEVGDEKETGSLHVVRVFED+ILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELEAKDD
Subjt:  MFLLCNSLLVFICLNSRSTVNSLDGSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELEAKDD

Query:  RTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAADDKTLSVVKETHDDEQEQEQEQGGGNDMISLEELNKKFDE
        RTLSVVEE HDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAADDKTLSVVKETHDD  EQEQEQGGGNDMISLEELNKKFDE
Subjt:  RTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAADDKTLSVVKETHDDEQEQEQEQGGGNDMISLEELNKKFDE

Query:  FIRTTRMKIRA
        FIRTTRMKIRA
Subjt:  FIRTTRMKIRA

XP_038902155.1 uncharacterized protein LOC120088789 [Benincasa hispida]2.7e-2145.87Show/hide
Query:  MFLLCNSLLVFICLNSRSTVNSLDGSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETL--FVEETRDD----ELEVREDDMTLFVIEEIHDDE
        MFL CNSLLVFICLNSR +V SL+  R   E+ ++++       R+ + R  + +      GETL   VEET  D    +L   +D+  L  +E    DE
Subjt:  MFLLCNSLLVFICLNSRSTVNSLDGSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETL--FVEETRDD----ELEVREDDMTLFVIEEIHDDE

Query:  LEA-KDDRTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAAD-DKTLSVVKETHDDEQEQEQEQGGGNDMISLE
        L+A +DDRTLSVV E    +E E    D +  LS++EET+D++ EVVED  TL  +EE +D EL   + DKTLS+ +ET +DE   EQEQGG  D ISLE
Subjt:  LEA-KDDRTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAAD-DKTLSVVKETHDDEQEQEQEQGGGNDMISLE

Query:  ELNKKFDEFIRTTRMKIR
        ELN+K +EFIR  +  IR
Subjt:  ELNKKFDEFIRTTRMKIR

TrEMBL top hitse value%identityAlignment
A0A0A0KCP4 Uncharacterized protein1.5e-0948.72Show/hide
Query:  DDRTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAAD-------DKTLSVVKETHDDEQEQEQEQGGGNDMISL
        DD+TL    E    N+ +    + DM LS+++ET+ DELE+V+DD TL  +EETQD + +  +       DKTLSVV+ET +D+   EQ+QGG  D ISL
Subjt:  DDRTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAAD-------DKTLSVVKETHDDEQEQEQEQGGGNDMISL

Query:  EELNKKFDEFIRTTRMK
        EELN+K +EFIR  RMK
Subjt:  EELNKKFDEFIRTTRMK

A0A444YFI2 Uncharacterized protein2.9e-0531.82Show/hide
Query:  MFLLCNSLLVFICLNSRSTVNSLD----GSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELE
        MFLLCN LLVF+ + +RS   S D     S   GE   E+E     V+ + E++ +I E N                 + V EDD  L + +   + E E
Subjt:  MFLLCNSLLVFICLNSRSTVNSLD----GSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELE

Query:  AKDD-----RTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDE-LEAADDKTLSVVKETHDDEQEQEQEQGGGNDMIS
        A+DD     + + V EE H D++ +     V+    + EE  ++E         LFD  E +D+E +  +DD+ LS  +   ++E+E+E+E+   ++M+S
Subjt:  AKDD-----RTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDE-LEAADDKTLSVVKETHDDEQEQEQEQGGGNDMIS

Query:  LEELNKKFDEFIRTTRMKIR
         EELNKKF++FIR  +  +R
Subjt:  LEELNKKFDEFIRTTRMKIR

A0A6J1CFL5 uncharacterized protein LOC1110112351.2e-9997.63Show/hide
Query:  MFLLCNSLLVFICLNSRSTVNSLDGSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELEAKDD
        MFLLCNSLLVFICLNS STVNSLDGSRTVGEVGDEKETGSLHVVRVFED+ILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELEAKDD
Subjt:  MFLLCNSLLVFICLNSRSTVNSLDGSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELEAKDD

Query:  RTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAADDKTLSVVKETHDDEQEQEQEQGGGNDMISLEELNKKFDE
        RTLSVVEE HDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAADDKTLSVVKETHDD  EQEQEQGGGNDMISLEELNKKFDE
Subjt:  RTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAADDKTLSVVKETHDDEQEQEQEQGGGNDMISLEELNKKFDE

Query:  FIRTTRMKIRA
        FIRTTRMKIRA
Subjt:  FIRTTRMKIRA

A0A6P5MBZ0 uncharacterized protein LOC1102738603.8e-0532.27Show/hide
Query:  MFLLCNSLLVFICLNSRSTVNSLDGSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEE---TRDDELEVREDDMTLFV--IEEIHDDEL
        MFLLCN LLVF+         S  GSR   +                +D I   E+  E+  E + +EE     +  + V EDD  L +   +E  ++E 
Subjt:  MFLLCNSLLVFICLNSRSTVNSLDGSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEE---TRDDELEVREDDMTLFV--IEEIHDDEL

Query:  EAKDD----RTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDE-LEAADDKTLSVVKETHDDEQEQEQEQGGGNDMIS
        EA+DD      + VV+E H D++ +Q           VEE  + EL   E++  LFD  E +D+E +  +DD+ LS   E + +E+E+E+++   ++M+S
Subjt:  EAKDD----RTLSVVEETHDDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDE-LEAADDKTLSVVKETHDDEQEQEQEQGGGNDMIS

Query:  LEELNKKFDEFIRTTRMKIR
         EELNKKF++FIR  +  +R
Subjt:  LEELNKKFDEFIRTTRMKIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTACTCTGCAATAGCCTACTTGTTTTCATTTGTCTAAATTCTCGCTCTACTGTTAATTCACTGGATGGAAGTAGAACAGTTGGTGAAGTTGGAGATGAGAAAGA
AACGGGATCATTGCATGTTGTACGAGTTTTCGAAGATCGGATTCTGATTGCGGAGGACAACGATGAGAAGGCTGGTGAAACTCTGTTTGTTGAAGAAACTCGAGATGATG
AATTAGAAGTCAGGGAGGATGATATGACTCTCTTTGTCATTGAAGAAATTCACGATGATGAATTAGAGGCGAAGGATGATAGGACTCTCTCGGTTGTTGAGGAAACTCAC
GATGATAATGAACAAGAACAAGGAGGCGGCGATGTTGATATGATTCTCTCAATCGTTGAAGAAACTCGAGATGATGAGTTAGAAGTTGTGGAGGATGATATGACTCTCTT
TGACGTTGAAGAAACTCAAGATGATGAATTAGAGGCGGCGGATGATAAGACTCTCTCAGTCGTTAAAGAAACTCACGATGATGAACAAGAACAAGAACAAGAACAAGGAG
GCGGCAATGATATGATCAGTTTAGAGGAGTTGAACAAAAAATTTGATGAGTTCATAAGAACAACTAGAATGAAAATAAGAGCT
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTACTCTGCAATAGCCTACTTGTTTTCATTTGTCTAAATTCTCGCTCTACTGTTAATTCACTGGATGGAAGTAGAACAGTTGGTGAAGTTGGAGATGAGAAAGA
AACGGGATCATTGCATGTTGTACGAGTTTTCGAAGATCGGATTCTGATTGCGGAGGACAACGATGAGAAGGCTGGTGAAACTCTGTTTGTTGAAGAAACTCGAGATGATG
AATTAGAAGTCAGGGAGGATGATATGACTCTCTTTGTCATTGAAGAAATTCACGATGATGAATTAGAGGCGAAGGATGATAGGACTCTCTCGGTTGTTGAGGAAACTCAC
GATGATAATGAACAAGAACAAGGAGGCGGCGATGTTGATATGATTCTCTCAATCGTTGAAGAAACTCGAGATGATGAGTTAGAAGTTGTGGAGGATGATATGACTCTCTT
TGACGTTGAAGAAACTCAAGATGATGAATTAGAGGCGGCGGATGATAAGACTCTCTCAGTCGTTAAAGAAACTCACGATGATGAACAAGAACAAGAACAAGAACAAGGAG
GCGGCAATGATATGATCAGTTTAGAGGAGTTGAACAAAAAATTTGATGAGTTCATAAGAACAACTAGAATGAAAATAAGAGCT
Protein sequenceShow/hide protein sequence
MFLLCNSLLVFICLNSRSTVNSLDGSRTVGEVGDEKETGSLHVVRVFEDRILIAEDNDEKAGETLFVEETRDDELEVREDDMTLFVIEEIHDDELEAKDDRTLSVVEETH
DDNEQEQGGGDVDMILSIVEETRDDELEVVEDDMTLFDVEETQDDELEAADDKTLSVVKETHDDEQEQEQEQGGGNDMISLEELNKKFDEFIRTTRMKIRA