CuGenDBv2

Gene ID	MS004956
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Genome location	scaffold176:1695350..1695977
RNA-Seq Expression	MS004956
Synteny	MS004956
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004140001.1 uncharacterized protein LOC101219556 [Cucumis sativus]

4.0e-49

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Query:  MAAKFALSSSLTIKFPLQQNP-SSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII
        MAAKF LSSSLTIKFPLQQNP SSFF PLPS  SSP  +P + +SRFKL+ANLGGGDAEIKK GGKKKFITKEEEPEQYWQ+AGEREGENPMKTPLPYII
Subjt:  MAAKFALSSSLTIKFPLQQNP-SSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII

Query:  IFGMSTPFVILAIAFANGWVKVPVR
        IFGMSTPFVILAIAFANGWVKVPVR
Subjt:  IFGMSTPFVILAIAFANGWVKVPVR

XP_008464165.1 PREDICTED: uncharacterized protein LOC103502113 [Cucumis melo]

5.2e-49

87.2

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Query:  MAAKFALSSSLTIKFPLQQNP-SSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII
        MAAKF LSSSLT+KFPLQQNP SSFF PLPS  SSP  +P + +SRFKL+ANLGGGDAEIKK GGKKKFITKEEEPEQYWQ+AGEREGENPMKTPLPYII
Subjt:  MAAKFALSSSLTIKFPLQQNP-SSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII

Query:  IFGMSTPFVILAIAFANGWVKVPVR
        IFGMSTPFVILAIAFANGWVKVPVR
Subjt:  IFGMSTPFVILAIAFANGWVKVPVR

XP_022140463.1 uncharacterized protein LOC111011130 [Momordica charantia]

2.0e-61

100

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Query:  MAAKFALSSSLTIKFPLQQNPSSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYIII
        MAAKFALSSSLTIKFPLQQNPSSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYIII
Subjt:  MAAKFALSSSLTIKFPLQQNPSSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYIII

Query:  FGMSTPFVILAIAFANGWVKVPVR
        FGMSTPFVILAIAFANGWVKVPVR
Subjt:  FGMSTPFVILAIAFANGWVKVPVR

XP_022971133.1 uncharacterized protein LOC111469898 [Cucurbita maxima]

6.8e-49

87.2

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Query:  MAAKFALSSSL-TIKFPLQQNPSSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII
        MAAKF LSSSL TIKFPLQQNPS FF PLP    SP PKPK RAS+FKL+AN GGGDAE+KK GGKKKFITKEEEPEQYWQ+AGEREGENPMKTPLPYII
Subjt:  MAAKFALSSSL-TIKFPLQQNPSSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII

Query:  IFGMSTPFVILAIAFANGWVKVPVR
        IFGMSTPFVILAIAFANGWVKVPVR
Subjt:  IFGMSTPFVILAIAFANGWVKVPVR

XP_023534591.1 uncharacterized protein LOC111796124 [Cucurbita pepo subsp. pepo]

1.5e-48

84.92

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Query:  MAAKFALSSSL-TIKFPLQQNPSSFFAPLP-SGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYI
        MAAKF LSSSL TIKFPLQQNPS FFAPLP +  S P P+P  RAS+FKL+AN GGGDAE+KK GGKKKFITKE+EPEQYWQ+AGEREGENPMKTPLPYI
Subjt:  MAAKFALSSSL-TIKFPLQQNPSSFFAPLP-SGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYI

Query:  IIFGMSTPFVILAIAFANGWVKVPVR
        IIFGMSTPFVILAIAFANGWVKVPVR
Subjt:  IIFGMSTPFVILAIAFANGWVKVPVR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA68 Uncharacterized protein

1.9e-49

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Query:  MAAKFALSSSLTIKFPLQQNP-SSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII
        MAAKF LSSSLTIKFPLQQNP SSFF PLPS  SSP  +P + +SRFKL+ANLGGGDAEIKK GGKKKFITKEEEPEQYWQ+AGEREGENPMKTPLPYII
Subjt:  MAAKFALSSSLTIKFPLQQNP-SSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII

Query:  IFGMSTPFVILAIAFANGWVKVPVR
        IFGMSTPFVILAIAFANGWVKVPVR
Subjt:  IFGMSTPFVILAIAFANGWVKVPVR

A0A1S3CKW7 uncharacterized protein LOC103502113

2.5e-49

87.2

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Query:  MAAKFALSSSLTIKFPLQQNP-SSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII
        MAAKF LSSSLT+KFPLQQNP SSFF PLPS  SSP  +P + +SRFKL+ANLGGGDAEIKK GGKKKFITKEEEPEQYWQ+AGEREGENPMKTPLPYII
Subjt:  MAAKFALSSSLTIKFPLQQNP-SSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII

Query:  IFGMSTPFVILAIAFANGWVKVPVR
        IFGMSTPFVILAIAFANGWVKVPVR
Subjt:  IFGMSTPFVILAIAFANGWVKVPVR

A0A5D3CJG8 Uncharacterized protein

2.5e-49

87.2

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Query:  MAAKFALSSSLTIKFPLQQNP-SSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII
        MAAKF LSSSLT+KFPLQQNP SSFF PLPS  SSP  +P + +SRFKL+ANLGGGDAEIKK GGKKKFITKEEEPEQYWQ+AGEREGENPMKTPLPYII
Subjt:  MAAKFALSSSLTIKFPLQQNP-SSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII

Query:  IFGMSTPFVILAIAFANGWVKVPVR
        IFGMSTPFVILAIAFANGWVKVPVR
Subjt:  IFGMSTPFVILAIAFANGWVKVPVR

A0A6J1CI22 uncharacterized protein LOC111011130

9.9e-62

100

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Query:  MAAKFALSSSLTIKFPLQQNPSSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYIII
        MAAKFALSSSLTIKFPLQQNPSSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYIII
Subjt:  MAAKFALSSSLTIKFPLQQNPSSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYIII

Query:  FGMSTPFVILAIAFANGWVKVPVR
        FGMSTPFVILAIAFANGWVKVPVR
Subjt:  FGMSTPFVILAIAFANGWVKVPVR

A0A6J1I5Y3 uncharacterized protein LOC111469898

3.3e-49

87.2

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Query:  MAAKFALSSSL-TIKFPLQQNPSSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII
        MAAKF LSSSL TIKFPLQQNPS FF PLP    SP PKPK RAS+FKL+AN GGGDAE+KK GGKKKFITKEEEPEQYWQ+AGEREGENPMKTPLPYII
Subjt:  MAAKFALSSSL-TIKFPLQQNPSSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYII

Query:  IFGMSTPFVILAIAFANGWVKVPVR
        IFGMSTPFVILAIAFANGWVKVPVR
Subjt:  IFGMSTPFVILAIAFANGWVKVPVR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G05310.1 unknown protein

1.2e-32

61.36

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Query:  MAAKFALSSSLTIKFPLQQNPS--------SFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMK
        MAAK  + SS    F  + N S        S    LP     P+P       +FKL A LGGGD E+K    KKKFITK+EEPEQYWQS GEREGENPMK
Subjt:  MAAKFALSSSLTIKFPLQQNPS--------SFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMK

Query:  TPLPYIIIFGMSTPFVILAIAFANGWVKVPVR
        TPLPYIIIFGMSTPFVILAIAFANGW+KVP+R
Subjt:  TPLPYIIIFGMSTPFVILAIAFANGWVKVPVR

AT4G13500.1 unknown protein

8.6e-34

63.78

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Query:  MAAKFALSSSLTIKFPLQQNPSSFFAPLPSGLSSPN---PKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPY
        MAAKF +SSS +       + +S  +   S L+ P    P        FKL A LGGGD E+K    KKKFITKEEEPEQYWQS GEREGENPMKTPLPY
Subjt:  MAAKFALSSSLTIKFPLQQNPSSFFAPLPSGLSSPN---PKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPY

Query:  IIIFGMSTPFVILAIAFANGWVKVPVR
        IIIFGMSTPFVILAIAFANGW+KVP+R
Subjt:  IIIFGMSTPFVILAIAFANGWVKVPVR

Sequences

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CDS sequence

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ATGGCCGCAAAATTCGCTCTTTCTTCTTCCCTCACCATCAAATTTCCCCTCCAACAAAACCCATCTTCCTTCTTCGCTCCTCTTCCCTCAGGCCTCTCGTCGCCAAACCC
AAAGCCCAAGTCCAGAGCTTCTCGCTTCAAACTTGTTGCAAATTTAGGTGGTGGAGATGCAGAGATCAAGAAGGGAGGAGGGAAGAAGAAGTTTATAACCAAAGAGGAAG
AGCCAGAGCAGTATTGGCAGTCAGCAGGGGAGAGGGAAGGGGAGAATCCCATGAAGACTCCTCTGCCTTATATCATCATCTTCGGGATGTCGACTCCGTTCGTGATCTTA
GCCATAGCTTTTGCCAATGGCTGGGTTAAAGTACCTGTGAGA

mRNA sequence

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Protein sequence

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MAAKFALSSSLTIKFPLQQNPSSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEIKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYIIIFGMSTPFVIL
AIAFANGWVKVPVR

MS004956 (gene) of Bitter gourd (TR) v1 genome