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MS004988 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004988
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZinc finger, CW-type
Genome locationscaffold176:1924748..1924849
RNA-Seq ExpressionMS004988
SyntenyMS004988
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65840.2 hypothetical protein Csa_019577 [Cucumis sativus]4.1e-12100Show/hide
Query:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
TYK28579.1 PHD domain-containing protein [Cucumis melo var. makuwa]4.1e-12100Show/hide
Query:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
XP_008453559.1 PREDICTED: uncharacterized protein LOC103494237 isoform X1 [Cucumis melo]4.1e-12100Show/hide
Query:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
XP_011656989.1 uncharacterized protein LOC101212408 isoform X1 [Cucumis sativus]4.1e-12100Show/hide
Query:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
XP_022135117.1 uncharacterized protein LOC111007173 [Momordica charantia]4.1e-12100Show/hide
Query:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
TrEMBL top hitse value%identityAlignment
A0A0A0LWX9 CW-type domain-containing protein2.0e-12100Show/hide
Query:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
A0A1S3BXC2 uncharacterized protein LOC103494237 isoform X22.0e-12100Show/hide
Query:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
A0A5A7USR9 Tyrosine-protein kinase BAZ1B2.0e-12100Show/hide
Query:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
A0A5D3DYX2 PHD domain-containing protein2.0e-12100Show/hide
Query:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
A0A6J1C1R7 uncharacterized protein LOC1110071732.0e-12100Show/hide
Query:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein1.4e-1075Show/hide
Query:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        RRAP  EVQT DWECFC   WDP+ ADCAVPQ
Subjt:  RRAPLFEVQTDDWECFCSILWDPTHADCAVPQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTAGGGCTCCACTTTTTGAAGTCCAAACTGATGACTGGGAGTGCTTCTGCTCTATCCTATGGGATCCAACACATGCTGATTGTGCTGTACCTCAGGTGAAA
mRNA sequenceShow/hide mRNA sequence
CGTAGGGCTCCACTTTTTGAAGTCCAAACTGATGACTGGGAGTGCTTCTGCTCTATCCTATGGGATCCAACACATGCTGATTGTGCTGTACCTCAGGTGAAA
Protein sequenceShow/hide protein sequence
RRAPLFEVQTDDWECFCSILWDPTHADCAVPQVK