; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS004990 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS004990
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAmino acid transporter family protein
Genome locationscaffold176:1932457..1932765
RNA-Seq ExpressionMS004990
SyntenyMS004990
Gene Ontology termsGO:0003333 - amino acid transmembrane transport (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005774 - vacuolar membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015171 - amino acid transmembrane transporter activity (molecular function)
GO:0015293 - symporter activity (molecular function)
InterPro domainsIPR013057 - Amino acid transporter, transmembrane domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570973.1 Amino acid transporter AVT3B, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4695.15Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPYAFKRTGW+MSLLMLFSVAF TYYCMMLLV+TRRKIESVIGFSKINSFGDLGYTICGSPGRIIVD+LIILSQTGFC+GYLIFIGN
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        TMA
Subjt:  TMA

XP_022140690.1 amino acid transporter AVT3B-like [Momordica charantia]4.8e-48100Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        TMA
Subjt:  TMA

XP_022986978.1 amino acid transporter AVT3B-like [Cucurbita maxima]2.0e-4694.17Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPYAFKRTGW+MSLLMLFSVAF TYYCMMLLV+TRRKIESV+GFSKINSFGDLGYTICGSPGRIIVD+LIILSQTGFC+GYLIFIGN
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        TMA
Subjt:  TMA

XP_023512173.1 amino acid transporter AVT3B-like [Cucurbita pepo subsp. pepo]1.5e-4695.15Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPYAFKRTGW+MSLLMLFSVAF TYYCMMLLV+TRRKIESVIGFSKINSFGDLGYTICGSPGRIIVD+LIILSQTGFC+GYLIFIGN
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        TMA
Subjt:  TMA

XP_038876664.1 amino acid transporter AVT3B-like [Benincasa hispida]1.2e-4695.15Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPYAFKRTGW+MSLLMLFSVAFLTYYCMMLLV+TRRKIESVIGFSKINSFGDLGYTICGSPGR+IVD LIILSQTGFC+GYLIFIGN
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        TMA
Subjt:  TMA

TrEMBL top hitse value%identityAlignment
A0A1S3BJZ8 amino acid transporter ANTL1-like1.7e-4694.17Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPYAFKRTGW+MSLLMLFSV+FLTYYCMMLLV+TRRKIESVIGFSKINSFGDLGYTICGSPGR IVD+LIILSQTGFC+GYLIFIGN
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        TMA
Subjt:  TMA

A0A5A7U0U9 Amino acid transporter ANTL1-like1.7e-4694.17Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPYAFKRTGW+MSLLMLFSV+FLTYYCMMLLV+TRRKIESVIGFSKINSFGDLGYTICGSPGR IVD+LIILSQTGFC+GYLIFIGN
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        TMA
Subjt:  TMA

A0A5D3CW42 Amino acid transporter ANTL1-like1.7e-4694.17Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPYAFKRTGW+MSLLMLFSV+FLTYYCMMLLV+TRRKIESVIGFSKINSFGDLGYTICGSPGR IVD+LIILSQTGFC+GYLIFIGN
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        TMA
Subjt:  TMA

A0A6J1CFT9 amino acid transporter AVT3B-like2.3e-48100Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        TMA
Subjt:  TMA

A0A6J1JI45 amino acid transporter AVT3B-like9.7e-4794.17Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPYAFKRTGW+MSLLMLFSVAF TYYCMMLLV+TRRKIESV+GFSKINSFGDLGYTICGSPGRIIVD+LIILSQTGFC+GYLIFIGN
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        TMA
Subjt:  TMA

SwissProt top hitse value%identityAlignment
F4ILY9 Amino acid transporter AVT3B4.1e-3474.76Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPYAFKRTGWLM LL LFSVA L  +CMMLLV  RRK    +G S I SFGDLG+  CG+ GR +VDILIILSQ GFC+GYLIFIGN
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        T+A
Subjt:  TMA

Q10074 Vacuolar amino acid transporter 38.6e-0837.76Show/hide
Query:  AIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGNTM
        + VG GVL LP AFK  G + S   L  V  L++ C +LL+ TR K+          SFGD+G T+ G   R  +   I++SQ GF   Y+ F+ +T+
Subjt:  AIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGNTM

Q9FKY3 Amino acid transporter AVT3A2.4e-3466.02Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPY FK+TGWL+ LL L  V+ LT++CMMLLV TRRK+ES+ GF+ I SFGDLG ++CG  GR++VD++++LSQ+GFC+ YLIF+  
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        TMA
Subjt:  TMA

Q9SF09 Amino acid transporter ANT12.2e-1945.63Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        N+ ++IVG GVLGLPYAF+  GWL   L +  V F TYYCM+LL+  R K+ES  G  +  ++GDLG+   G+ GR + + LI  +Q G  + YL+FIG 
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
         ++
Subjt:  TMA

Q9SVG0 Amino acid transporter AVT3C8.8e-3773.08Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESV-IGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIG
        NVFIA+VGAGVLGLPYAFKRTGWLM +L+L SV+ LT++CMMLLV+TRRK++S   G SKI SFGDLG+ +CGS GRI+VD+ IILSQ GFC+GYLIFIG
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESV-IGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIG

Query:  NTMA
         T+A
Subjt:  NTMA

Arabidopsis top hitse value%identityAlignment
AT2G42005.1 Transmembrane amino acid transporter family protein2.9e-3574.76Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPYAFKRTGWLM LL LFSVA L  +CMMLLV  RRK    +G S I SFGDLG+  CG+ GR +VDILIILSQ GFC+GYLIFIGN
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        T+A
Subjt:  TMA

AT3G11900.1 aromatic and neutral transporter 11.5e-2045.63Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        N+ ++IVG GVLGLPYAF+  GWL   L +  V F TYYCM+LL+  R K+ES  G  +  ++GDLG+   G+ GR + + LI  +Q G  + YL+FIG 
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
         ++
Subjt:  TMA

AT4G38250.1 Transmembrane amino acid transporter family protein6.2e-3873.08Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESV-IGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIG
        NVFIA+VGAGVLGLPYAFKRTGWLM +L+L SV+ LT++CMMLLV+TRRK++S   G SKI SFGDLG+ +CGS GRI+VD+ IILSQ GFC+GYLIFIG
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESV-IGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIG

Query:  NTMA
         T+A
Subjt:  NTMA

AT5G15240.1 Transmembrane amino acid transporter family protein3.9e-0836.73Show/hide
Query:  AIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGNTM
        A+ G G+L +PYA    GWL SL++LF+VA  T+YC +L+   +R +E       + S+ D+GY   G+ GR+IV I + L        +LI  G+ +
Subjt:  AIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGNTM

AT5G65990.1 Transmembrane amino acid transporter family protein1.7e-3566.02Show/hide
Query:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN
        NVFIAIVGAGVLGLPY FK+TGWL+ LL L  V+ LT++CMMLLV TRRK+ES+ GF+ I SFGDLG ++CG  GR++VD++++LSQ+GFC+ YLIF+  
Subjt:  NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGN

Query:  TMA
        TMA
Subjt:  TMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACGTTTTTATCGCGATCGTTGGGGCCGGCGTTCTGGGGCTTCCATACGCCTTCAAGCGCACCGGGTGGCTCATGAGCCTTCTCATGCTCTTTTCCGTCGCCTTCTTAAC
CTATTACTGTATGATGCTCCTCGTCTTCACTCGCCGGAAGATCGAGTCGGTAATCGGATTTTCTAAGATCAATTCGTTTGGGGATTTGGGTTACACTATTTGCGGTTCGC
CTGGGAGGATTATTGTTGATATTCTGATTATTTTGTCGCAAACTGGGTTTTGTATTGGCTATTTGATTTTCATTGGCAATACCATGGCC
mRNA sequenceShow/hide mRNA sequence
AACGTTTTTATCGCGATCGTTGGGGCCGGCGTTCTGGGGCTTCCATACGCCTTCAAGCGCACCGGGTGGCTCATGAGCCTTCTCATGCTCTTTTCCGTCGCCTTCTTAAC
CTATTACTGTATGATGCTCCTCGTCTTCACTCGCCGGAAGATCGAGTCGGTAATCGGATTTTCTAAGATCAATTCGTTTGGGGATTTGGGTTACACTATTTGCGGTTCGC
CTGGGAGGATTATTGTTGATATTCTGATTATTTTGTCGCAAACTGGGTTTTGTATTGGCTATTTGATTTTCATTGGCAATACCATGGCC
Protein sequenceShow/hide protein sequence
NVFIAIVGAGVLGLPYAFKRTGWLMSLLMLFSVAFLTYYCMMLLVFTRRKIESVIGFSKINSFGDLGYTICGSPGRIIVDILIILSQTGFCIGYLIFIGNTMA