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MS005030 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005030
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMFS domain-containing protein
Genome locationscaffold176:2206086..2208726
RNA-Seq ExpressionMS005030
SyntenyMS005030
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsIPR011701 - Major facilitator superfamily
IPR020846 - Major facilitator superfamily domain
IPR036259 - MFS transporter superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140333.1 uncharacterized protein LOC111011033 isoform X1 [Momordica charantia]4.1e-8498.83Show/hide
Query:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
        ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
Subjt:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST

Query:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
        SFFYAYY MKTLTAMLCDGALL+LALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
Subjt:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV

XP_022140334.1 uncharacterized protein LOC111011033 isoform X2 [Momordica charantia]4.1e-8498.83Show/hide
Query:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
        ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
Subjt:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST

Query:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
        SFFYAYY MKTLTAMLCDGALL+LALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
Subjt:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV

XP_022140336.1 uncharacterized protein LOC111011033 isoform X3 [Momordica charantia]4.1e-8498.83Show/hide
Query:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
        ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
Subjt:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST

Query:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
        SFFYAYY MKTLTAMLCDGALL+LALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
Subjt:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV

XP_022140337.1 uncharacterized protein LOC111011033 isoform X4 [Momordica charantia]4.1e-8498.83Show/hide
Query:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
        ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
Subjt:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST

Query:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
        SFFYAYY MKTLTAMLCDGALL+LALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
Subjt:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV

XP_038901532.1 hippocampus abundant transcript-like protein 1 isoform X3 [Benincasa hispida]5.4e-5265.91Show/hide
Query:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPG-RDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERS
        ELI EL  LF TV L   G ++V PA+ D+T++SVCPG RDQCSLA YL  FQQAI+G GAM + P IGSLSDKYGRKS+LT  I LSI P AILAY+R+
Subjt:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPG-RDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERS

Query:  TSFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV-ICL
        TSFFYAYY MK L AM+  G L++LALAY ADK+ A+RRISAFGI+SG F  SFLCG+ AARFL I A F+V +CL
Subjt:  TSFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV-ICL

TrEMBL top hitse value%identityAlignment
A0A6J1CFG2 uncharacterized protein LOC111011033 isoform X22.0e-8498.83Show/hide
Query:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
        ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
Subjt:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST

Query:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
        SFFYAYY MKTLTAMLCDGALL+LALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
Subjt:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV

A0A6J1CFT0 uncharacterized protein LOC111011033 isoform X32.0e-8498.83Show/hide
Query:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
        ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
Subjt:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST

Query:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
        SFFYAYY MKTLTAMLCDGALL+LALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
Subjt:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV

A0A6J1CGK1 uncharacterized protein LOC111011033 isoform X42.0e-8498.83Show/hide
Query:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
        ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
Subjt:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST

Query:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
        SFFYAYY MKTLTAMLCDGALL+LALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
Subjt:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV

A0A6J1CHS4 uncharacterized protein LOC111011033 isoform X12.0e-8498.83Show/hide
Query:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
        ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
Subjt:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST

Query:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
        SFFYAYY MKTLTAMLCDGALL+LALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
Subjt:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV

W9QBZ4 Hippocampus abundant transcript 1 protein2.9e-5162.07Show/hide
Query:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST
        E +R LG LFVT+ L  FG S V PA+TDVT+ ++CPGRD+CS AIYL GFQQAITG G + + P+IG+LSDKYGRKSLLT+ + L+I+P  ILAY R+T
Subjt:  ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERST

Query:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKVICL
        +FFYAYY MKTLTAM+C+G+   LALAY AD I    R SAFGI+SG  SA+F+CG+ A+RFLP  +TF+V  L
Subjt:  SFFYAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKVICL

SwissProt top hitse value%identityAlignment
P02982 Tetracycline resistance protein, class A1.5e-0428.76Show/hide
Query:  RELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFF
        R L  +  TV L   GI +++P +  +  + V          I LA +  A+  F      P++G+LSD++GR+ +L VS+A + +  AI+A   +  F 
Subjt:  RELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFF

Query:  YAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCG
        +  Y  + +  +   GA   +A AY AD    D R   FG +S  F    + G
Subjt:  YAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCG

Arabidopsis top hitse value%identityAlignment
AT2G16970.1 Major facilitator superfamily protein3.2e-3446.78Show/hide
Query:  ELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPG-RDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFF
        EL  L  TV L+GF   +V P MTDVTV +VC G  + CSLA+YL G +Q   G G M ++P+IG+LSD+YG K+LLT+ + LSI+PPAILAY R T+FF
Subjt:  ELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPG-RDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFF

Query:  YAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKVICL
        YA+Y  K L  M              A  +   +RIS FG+++G  S S +C +F+AR LPI + F+V  +
Subjt:  YAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKVICL

AT2G16980.1 Major facilitator superfamily protein2.7e-4150.88Show/hide
Query:  ELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPG-RDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFF
        EL  L VTV L+G    ++ P MTDVTV +VC G  D CSLA+YL G QQ   G G M ++P+IG+LSD+YG K++LT+ + LS++PPAIL Y R T+FF
Subjt:  ELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPG-RDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFF

Query:  YAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKVICL
        YA+Y +KTL  M+C G +  LA AY A  +   +RIS FGI++G  S S +C S +ARFL I +TF+V  +
Subjt:  YAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKVICL

AT2G16980.2 Major facilitator superfamily protein2.7e-4150.88Show/hide
Query:  ELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPG-RDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFF
        EL  L VTV L+G    ++ P MTDVTV +VC G  D CSLA+YL G QQ   G G M ++P+IG+LSD+YG K++LT+ + LS++PPAIL Y R T+FF
Subjt:  ELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPG-RDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFF

Query:  YAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKVICL
        YA+Y +KTL  M+C G +  LA AY A  +   +RIS FGI++G  S S +C S +ARFL I +TF+V  +
Subjt:  YAYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKVICL

AT2G16990.1 Major facilitator superfamily protein4.3e-3950.3Show/hide
Query:  LGQLFVTVLLTGFGISVVIPAMTDVTVESVCPG-RDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFFY
        L  +  TV L+ F   +V+P +TDVTV +VC G  D CSLA+YL GFQQ   G G M ++P+IG+LSD+YG K++LT+ + LSI+PP IL Y R   FFY
Subjt:  LGQLFVTVLLTGFGISVVIPAMTDVTVESVCPG-RDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFFY

Query:  AYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
         +Y  K LT+M+C+G +  LA AY A  I    RISAFGI++G  + + L G+  ARFLPI  TF+V
Subjt:  AYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV

AT2G16990.2 Major facilitator superfamily protein4.3e-3950.3Show/hide
Query:  LGQLFVTVLLTGFGISVVIPAMTDVTVESVCPG-RDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFFY
        L  +  TV L+ F   +V+P +TDVTV +VC G  D CSLA+YL GFQQ   G G M ++P+IG+LSD+YG K++LT+ + LSI+PP IL Y R   FFY
Subjt:  LGQLFVTVLLTGFGISVVIPAMTDVTVESVCPG-RDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFFY

Query:  AYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV
         +Y  K LT+M+C+G +  LA AY A  I    RISAFGI++G  + + L G+  ARFLPI  TF+V
Subjt:  AYYAMKTLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGTTAATTAGAGAATTAGGGCAGCTGTTCGTGACGGTGCTGCTGACCGGATTCGGGATCAGCGTTGTGATTCCGGCGATGACGGACGTAACGGTGGAATCTGTGTGTCC
AGGGCGAGACCAGTGCTCCCTCGCCATTTATCTCGCCGGCTTCCAACAGGCGATAACTGGATTTGGAGCGATGTTTGTGATACCGTTGATCGGTAGTCTATCGGACAAAT
ATGGAAGGAAAAGTTTATTGACTGTGTCCATTGCGCTCTCCATTATGCCTCCCGCGATATTGGCGTATGAAAGAAGCACCAGTTTCTTCTACGCGTACTATGCGATGAAG
ACTCTCACCGCCATGTTGTGCGACGGCGCGTTACTTACACTCGCCCTCGCCTATACGGCAGACAAAATTCCGGCCGACCGGCGAATATCGGCGTTCGGAATCATATCTGG
AGCTTTTTCAGCATCTTTCTTGTGCGGGAGCTTTGCCGCAAGGTTCCTTCCAATTGACGCAACCTTTAAGGTTATCTGTCTA
mRNA sequenceShow/hide mRNA sequence
GAGTTAATTAGAGAATTAGGGCAGCTGTTCGTGACGGTGCTGCTGACCGGATTCGGGATCAGCGTTGTGATTCCGGCGATGACGGACGTAACGGTGGAATCTGTGTGTCC
AGGGCGAGACCAGTGCTCCCTCGCCATTTATCTCGCCGGCTTCCAACAGGCGATAACTGGATTTGGAGCGATGTTTGTGATACCGTTGATCGGTAGTCTATCGGACAAAT
ATGGAAGGAAAAGTTTATTGACTGTGTCCATTGCGCTCTCCATTATGCCTCCCGCGATATTGGCGTATGAAAGAAGCACCAGTTTCTTCTACGCGTACTATGCGATGAAG
ACTCTCACCGCCATGTTGTGCGACGGCGCGTTACTTACACTCGCCCTCGCCTATACGGCAGACAAAATTCCGGCCGACCGGCGAATATCGGCGTTCGGAATCATATCTGG
AGCTTTTTCAGCATCTTTCTTGTGCGGGAGCTTTGCCGCAAGGTTCCTTCCAATTGACGCAACCTTTAAGGTTATCTGTCTA
Protein sequenceShow/hide protein sequence
ELIRELGQLFVTVLLTGFGISVVIPAMTDVTVESVCPGRDQCSLAIYLAGFQQAITGFGAMFVIPLIGSLSDKYGRKSLLTVSIALSIMPPAILAYERSTSFFYAYYAMK
TLTAMLCDGALLTLALAYTADKIPADRRISAFGIISGAFSASFLCGSFAARFLPIDATFKVICL