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MS005033 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005033
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold176:2220351..2220617
RNA-Seq ExpressionMS005033
SyntenyMS005033
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0000421 - autophagosome membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN62004.2 hypothetical protein Csa_005914 [Cucumis sativus]3.0e-1458.43Show/hide
Query:  NDGAEPLDASESVLLQAPHKPGVSSGRRREHGLQVSQGGVLDEWVLDRKLDGAGEGRGGGG-RRRRCVRQEVLEAGVGLEGGHFDVVGE
        +DG EPLDA+++VLL+   K  V  G   EHGL+V +GGV D+ VLD +L    EG GGGG  RRR V +EV EAGVGL+ GHFDVVGE
Subjt:  NDGAEPLDASESVLLQAPHKPGVSSGRRREHGLQVSQGGVLDEWVLDRKLDGAGEGRGGGG-RRRRCVRQEVLEAGVGLEGGHFDVVGE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACGACGGCGCCGAGCCACTCGATGCATCCGAATCCGTGCTTCTTCAGGCTCCGCATAAACCCGGCGTCTCCAGCGGCCGGCGGCGCGAGCATGGGCTGCAGGTAAGCCA
AGGCGGCGTGCTTGACGAGTGGGTTCTTGATCGGAAGCTCGACGGAGCTGGAGAAGGGCGAGGCGGCGGAGGGCGGCGGCGGAGGTGTGTCCGGCAAGAGGTCCTTGAGG
CTGGTGTAGGATTGGAGGGTGGTCATTTCGATGTGGTTGGAGAAATC
mRNA sequenceShow/hide mRNA sequence
AACGACGGCGCCGAGCCACTCGATGCATCCGAATCCGTGCTTCTTCAGGCTCCGCATAAACCCGGCGTCTCCAGCGGCCGGCGGCGCGAGCATGGGCTGCAGGTAAGCCA
AGGCGGCGTGCTTGACGAGTGGGTTCTTGATCGGAAGCTCGACGGAGCTGGAGAAGGGCGAGGCGGCGGAGGGCGGCGGCGGAGGTGTGTCCGGCAAGAGGTCCTTGAGG
CTGGTGTAGGATTGGAGGGTGGTCATTTCGATGTGGTTGGAGAAATC
Protein sequenceShow/hide protein sequence
NDGAEPLDASESVLLQAPHKPGVSSGRRREHGLQVSQGGVLDEWVLDRKLDGAGEGRGGGGRRRRCVRQEVLEAGVGLEGGHFDVVGEI