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MS005044 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005044
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCarbamoyl-phosphate synthase (glutamine-hydrolyzing)
Genome locationscaffold176:2308281..2308440
RNA-Seq ExpressionMS005044
SyntenyMS005044
Gene Ontology termsGO:0006221 - pyrimidine nucleotide biosynthetic process (biological process)
GO:0000166 - nucleotide binding (molecular function)
GO:0016874 - ligase activity (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2614830.1 carbamoyl-phosphate synthase large chain [Pyrus ussuriensis x Pyrus communis]2.6e-1071.7Show/hide
Query:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL  P     YLD+NK KC SGNGH  IWGTSPASIDAA
Subjt:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
TQD72454.1 hypothetical protein C1H46_042018 [Malus baccata]2.6e-1071.7Show/hide
Query:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL  P     YLD+NK KC SGNGH  IWGTSPASIDAA
Subjt:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
XP_008358276.2 LOW QUALITY PROTEIN: carbamoyl-phosphate synthase large chain, chloroplastic [Malus domestica]2.6e-1071.7Show/hide
Query:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL  P     YLD+NK KC SGNGH  IWGTSPASIDAA
Subjt:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
XP_009338291.1 PREDICTED: carbamoyl-phosphate synthase large chain, chloroplastic-like [Pyrus x bretschneideri]2.6e-1071.7Show/hide
Query:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL  P     YLD+NK KC SGNGH  IWGTSPASIDAA
Subjt:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
XP_009358250.1 PREDICTED: carbamoyl-phosphate synthase large chain, chloroplastic-like [Pyrus x bretschneideri]2.6e-1071.7Show/hide
Query:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL  P     YLD+NK KC SGNGH  IWGTSPASIDAA
Subjt:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
TrEMBL top hitse value%identityAlignment
A0A540KE01 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)1.3e-1071.7Show/hide
Query:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL  P     YLD+NK KC SGNGH  IWGTSPASIDAA
Subjt:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
A0A5N5FUB3 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)1.8e-0967.92Show/hide
Query:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL  P     YLD+NK +C SGNGH  IWGTSPASID A
Subjt:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
A0A5N5GNJ8 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)1.3e-1071.7Show/hide
Query:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL  P     YLD+NK KC SGNGH  IWGTSPASIDAA
Subjt:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
A0A6J1FJE6 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)3.7e-1069.81Show/hide
Query:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL  P     YLD+NKLKC SG+GH  IWGTSP SIDAA
Subjt:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
A0A6J1IZ99 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)3.7e-1069.81Show/hide
Query:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL  P     YLD+NKLKC SG+GH  IWGTSP SIDAA
Subjt:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
SwissProt top hitse value%identityAlignment
B9EXM2 Carbamoyl-phosphate synthase large chain, chloroplastic1.5e-0862.26Show/hide
Query:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL  P     YL+D KL   SG G   IWGTSP SIDAA
Subjt:  PGCIDVQFGGQTPLKL-YPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
Q42601 Carbamoyl-phosphate synthase large chain, chloroplastic1.1e-0657.69Show/hide
Query:  PGCIDVQFGGQTPLKLYPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL      +YLD +     SG G   IWGTSP SIDAA
Subjt:  PGCIDVQFGGQTPLKLYPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
Arabidopsis top hitse value%identityAlignment
AT1G29900.1 carbamoyl phosphate synthetase B7.6e-0857.69Show/hide
Query:  PGCIDVQFGGQTPLKLYPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA
        P  I VQFGGQTPLKL      +YLD +     SG G   IWGTSP SIDAA
Subjt:  PGCIDVQFGGQTPLKLYPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTGGCTGCATCGACGTGCAATTTGGTGGCCAAACTCCATTGAAACTCTATCCGTTCAGCAGTATTTACTATTTAGATGACAACAAGCTTAAATGTGGTAGTGGCAATGG
GCATTTTCACATATGGGGTACGTCTCCAGCTTCCATAGATGCAGCT
mRNA sequenceShow/hide mRNA sequence
CCTGGCTGCATCGACGTGCAATTTGGTGGCCAAACTCCATTGAAACTCTATCCGTTCAGCAGTATTTACTATTTAGATGACAACAAGCTTAAATGTGGTAGTGGCAATGG
GCATTTTCACATATGGGGTACGTCTCCAGCTTCCATAGATGCAGCT
Protein sequenceShow/hide protein sequence
PGCIDVQFGGQTPLKLYPFSSIYYLDDNKLKCGSGNGHFHIWGTSPASIDAA