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MS005045 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005045
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCarbamoyl-phosphate synthase (glutamine-hydrolyzing)
Genome locationscaffold176:2308637..2308770
RNA-Seq ExpressionMS005045
SyntenyMS005045
Gene Ontology termsGO:0006541 - glutamine metabolic process (biological process)
GO:0044205 - 'de novo' UMP biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607722.1 Carbamoyl-phosphate synthase large chain, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.8e-0879.55Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        LSDA EI  DALADSHGN+TIGGIM+   ELAGVHSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

KAG7037297.1 Carbamoyl-phosphate synthase large chain, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-0879.55Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        LSDA EI  DALADSHGN+TIGGIM+   ELAGVHSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

XP_008447795.1 PREDICTED: carbamoyl-phosphate synthase large chain, chloroplastic [Cucumis melo]7.8e-0879.55Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        LSDA EI  DALADSHGN+TIGGIM+   ELAGVHSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

XP_022940780.1 carbamoyl-phosphate synthase large chain, chloroplastic-like [Cucurbita moschata]7.8e-0879.55Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        LSDA EI  DALADSHGN+TIGGIM+   ELAGVHSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

XP_038899248.1 carbamoyl-phosphate synthase large chain, chloroplastic [Benincasa hispida]7.8e-0879.55Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        LSDA EI  DALADSHGN+TIGGIM+   ELAGVHSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

TrEMBL top hitse value%identityAlignment
A0A0A0K592 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)3.8e-0879.55Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        LSDA EI  DALADSHGN+TIGGIM+   ELAGVHSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

A0A5D3DID8 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)3.8e-0879.55Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        LSDA EI  DALADSHGN+TIGGIM+   ELAGVHSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

A0A6J1CFG0 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)3.8e-0879.55Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        LSDA EI  DALADSHGN+TIGGIM+   ELAGVHSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

A0A6J1FJE6 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)3.8e-0879.55Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        LSDA EI  DALADSHGN+TIGGIM+   ELAGVHSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

A0A6J1IZ99 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)3.8e-0879.55Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        LSDA EI  DALADSHGN+TIGGIM+   ELAGVHSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

SwissProt top hitse value%identityAlignment
B9EXM2 Carbamoyl-phosphate synthase large chain, chloroplastic2.4e-0768.18Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        L DA EI  DALADS GN+ IGGIM+   E AG+HSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

P58942 Carbamoyl-phosphate synthase large chain4.5e-0656.82Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        L +A E+  D +AD  GN+ IGG+M+   E AGVHSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

P58943 Carbamoyl-phosphate synthase large chain4.5e-0656.82Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        L +A E+  D +AD  GN+ IGG+M+   E AGVHSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

Q42601 Carbamoyl-phosphate synthase large chain, chloroplastic3.1e-0765.91Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        LSDA EI  D L DS+GN+ IGGIM+   E AGVHSGDS C LP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

Q8YQL2 Carbamoyl-phosphate synthase large chain1.7e-0556.82Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        L +A E+  DA+AD  G + IGGIM+   E AG+HSGDS CSLP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP

Arabidopsis top hitse value%identityAlignment
AT1G29900.1 carbamoyl phosphate synthetase B2.2e-0865.91Show/hide
Query:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP
        LSDA EI  D L DS+GN+ IGGIM+   E AGVHSGDS C LP
Subjt:  LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTATCTGATGCTAAAGAAATTGGTCCTGATGCACTAGCTGATTCACATGGTAATATGACAATTGGTGGGATAATGGACATGGAGCATGAGTTGGCTGGAGTCCATTCTGG
TGATTCTGACTGTTCCCTTCCA
mRNA sequenceShow/hide mRNA sequence
TTATCTGATGCTAAAGAAATTGGTCCTGATGCACTAGCTGATTCACATGGTAATATGACAATTGGTGGGATAATGGACATGGAGCATGAGTTGGCTGGAGTCCATTCTGG
TGATTCTGACTGTTCCCTTCCA
Protein sequenceShow/hide protein sequence
LSDAKEIGPDALADSHGNMTIGGIMDMEHELAGVHSGDSDCSLP