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MS005054 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005054
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold176:2359436..2359842
RNA-Seq ExpressionMS005054
SyntenyMS005054
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2606712.1 hypothetical protein D8674_006429 [Pyrus ussuriensis x Pyrus communis]5.6e-1149.49Show/hide
Query:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTTVERIRDGEIQGLDL-AADFVDDLCESTFTCAAKAA
        MQS F  H   GLPLC+SG T  H + S EMADH+RRREAMRR+RS A     A+ ++GF   + ER+ + EI+  D   A  + DLC S   C AKAA
Subjt:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTTVERIRDGEIQGLDL-AADFVDDLCESTFTCAAKAA

KAG6605527.1 hypothetical protein SDJN03_02844, partial [Cucurbita argyrosperma subsp. sororia]4.3e-1151.04Show/hide
Query:  MQSKFGFHGLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTTVERIRDGEIQGLDLAADFVDDLCEST-FTCAAKAA
        M SK    GLPLCLSGF++SH  L+TEM DH+RRREAMRR+RSS++        IGFT   ++ I DG++           DLCE T  T AAKAA
Subjt:  MQSKFGFHGLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTTVERIRDGEIQGLDLAADFVDDLCEST-FTCAAKAA

PQM33250.1 uncharacterized protein Pyn_24942 [Prunus yedoensis var. nudiflora]3.6e-1047.52Show/hide
Query:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTT---VERIRDGEIQGLDLAADFVDDLCESTFTCAAKA
        MQS    H   GLPLC+SG T  H + S EMADH+RRREAM+RQRS A     A+ ++GF  ++    E+IR+G +   DLA+  + DLC     C AKA
Subjt:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTT---VERIRDGEIQGLDLAADFVDDLCESTFTCAAKA

Query:  A
        A
Subjt:  A

XP_007206683.1 uncharacterized protein LOC18774348 [Prunus persica]3.6e-1048.51Show/hide
Query:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGF---TTTTVERIRDGEIQGLDLAADFVDDLCESTFTCAAKA
        MQS    H   GLPLC+SG T  H + S EMADH+RRREAM+RQRS A     A+ ++GF   + +  E IR+G     DLA+  + DLC S   C AKA
Subjt:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGF---TTTTVERIRDGEIQGLDLAADFVDDLCESTFTCAAKA

Query:  A
        A
Subjt:  A

XP_023006923.1 uncharacterized protein LOC111499567 [Cucurbita maxima]5.1e-1253.12Show/hide
Query:  MQSKFGFHGLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTTVERIRDGEIQGLDLAADFVDDLCEST-FTCAAKAA
        M SK    GLPLCLSGF++SH SLSTEM DH+RRREAMRR+RSS++        IGFT   ++ I DG++           DLCE T  T AAKAA
Subjt:  MQSKFGFHGLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTTVERIRDGEIQGLDLAADFVDDLCEST-FTCAAKAA

TrEMBL top hitse value%identityAlignment
A0A314UD00 Uncharacterized protein1.8e-1047.52Show/hide
Query:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTT---VERIRDGEIQGLDLAADFVDDLCESTFTCAAKA
        MQS    H   GLPLC+SG T  H + S EMADH+RRREAM+RQRS A     A+ ++GF  ++    E+IR+G +   DLA+  + DLC     C AKA
Subjt:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTT---VERIRDGEIQGLDLAADFVDDLCESTFTCAAKA

Query:  A
        A
Subjt:  A

A0A5E4FV82 PREDICTED: LOC93007611.8e-1048.51Show/hide
Query:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGF---TTTTVERIRDGEIQGLDLAADFVDDLCESTFTCAAKA
        MQS    H   GLPLC+SG T  H + S EMADH+RRREAM+RQRS A     A+ ++GF   + +  E IR+G     DLA+  + DLC S   C AKA
Subjt:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGF---TTTTVERIRDGEIQGLDLAADFVDDLCESTFTCAAKA

Query:  A
        A
Subjt:  A

A0A5N5FZY2 Uncharacterized protein2.7e-1149.49Show/hide
Query:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTTVERIRDGEIQGLDL-AADFVDDLCESTFTCAAKAA
        MQS F  H   GLPLC+SG T  H + S EMADH+RRREAMRR+RS A     A+ ++GF   + ER+ + EI+  D   A  + DLC S   C AKAA
Subjt:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTTVERIRDGEIQGLDL-AADFVDDLCESTFTCAAKAA

A0A6J1L6A3 uncharacterized protein LOC1114995672.5e-1253.12Show/hide
Query:  MQSKFGFHGLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTTVERIRDGEIQGLDLAADFVDDLCEST-FTCAAKAA
        M SK    GLPLCLSGF++SH SLSTEM DH+RRREAMRR+RSS++        IGFT   ++ I DG++           DLCE T  T AAKAA
Subjt:  MQSKFGFHGLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTTVERIRDGEIQGLDLAADFVDDLCEST-FTCAAKAA

M5W2A4 Uncharacterized protein1.8e-1048.51Show/hide
Query:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGF---TTTTVERIRDGEIQGLDLAADFVDDLCESTFTCAAKA
        MQS    H   GLPLC+SG T  H + S EMADH+RRREAM+RQRS A     A+ ++GF   + +  E IR+G     DLA+  + DLC S   C AKA
Subjt:  MQSKFGFH---GLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGF---TTTTVERIRDGEIQGLDLAADFVDDLCESTFTCAAKA

Query:  A
        A
Subjt:  A

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G60400.3 unknown protein2.4e-0450Show/hide
Query:  GFHGLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPE
        G +G PLC+SG T    SLS EMADH++RR+ ++R+R S    E
Subjt:  GFHGLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCCAAGTTTGGGTTCCATGGTCTTCCTCTATGTCTCTCTGGCTTCACCATCTCTCATCCTTCTCTCTCTACCGAGATGGCGGATCACGAGCGCAGGAGGGAGGC
CATGAGAAGGCAAAGATCAAGCGCCTCGACGCCGGAGCGCGCCGATCCACAAATTGGCTTCACTACAACGACCGTGGAAAGGATCAGAGATGGAGAGATCCAAGGACTCG
ATCTTGCGGCGGATTTCGTGGATGATTTGTGCGAATCAACCTTCACTTGTGCTGCAAAAGCCGCG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCCAAGTTTGGGTTCCATGGTCTTCCTCTATGTCTCTCTGGCTTCACCATCTCTCATCCTTCTCTCTCTACCGAGATGGCGGATCACGAGCGCAGGAGGGAGGC
CATGAGAAGGCAAAGATCAAGCGCCTCGACGCCGGAGCGCGCCGATCCACAAATTGGCTTCACTACAACGACCGTGGAAAGGATCAGAGATGGAGAGATCCAAGGACTCG
ATCTTGCGGCGGATTTCGTGGATGATTTGTGCGAATCAACCTTCACTTGTGCTGCAAAAGCCGCG
Protein sequenceShow/hide protein sequence
MQSKFGFHGLPLCLSGFTISHPSLSTEMADHERRREAMRRQRSSASTPERADPQIGFTTTTVERIRDGEIQGLDLAADFVDDLCESTFTCAAKAA