; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005057 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005057
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin response factor
Genome locationscaffold176:2380273..2381975
RNA-Seq ExpressionMS005057
SyntenyMS005057
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily
IPR044835 - Auxin response factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140594.1 auxin response factor 4 isoform X1 [Momordica charantia]5.3e-13090.77Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP-------------EVAFNYS
        ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP             E+A N +
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP-------------EVAFNYS

Query:  I-YLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
               SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
Subjt:  I-YLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA

Query:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
Subjt:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

XP_022140595.1 auxin response factor 4 isoform X2 [Momordica charantia]5.3e-13090.77Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP-------------EVAFNYS
        ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP             E+A N +
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP-------------EVAFNYS

Query:  I-YLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
               SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
Subjt:  I-YLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA

Query:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
Subjt:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

XP_023534376.1 auxin response factor 4-like isoform X2 [Cucurbita pepo subsp. pepo]3.5e-12186.54Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP-------------EVAFNYS
        ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIA SASPFSPMEMR FDL PQILC+V NV LLANKENDEVYTQLTLLPLP             E+A N +
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP-------------EVAFNYS

Query:  I-YLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
               SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP LDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWS+FVSQKNLISGDA
Subjt:  I-YLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA

Query:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCA+DLA VVKAISTKS+FDVFYNPR
Subjt:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

XP_023534377.1 auxin response factor 4-like isoform X3 [Cucurbita pepo subsp. pepo]3.5e-12186.54Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP-------------EVAFNYS
        ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIA SASPFSPMEMR FDL PQILC+V NV LLANKENDEVYTQLTLLPLP             E+A N +
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP-------------EVAFNYS

Query:  I-YLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
               SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP LDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWS+FVSQKNLISGDA
Subjt:  I-YLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA

Query:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCA+DLA VVKAISTKS+FDVFYNPR
Subjt:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

XP_038901194.1 auxin response factor 4 [Benincasa hispida]2.7e-12186.54Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFN-------YSIYL---
        ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIA SASPFSPMEMR FDL PQILC+V NV LLANKENDEVYTQLTL PLPE+  +         + L   
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFN-------YSIYL---

Query:  ----FWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
               SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP LDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
Subjt:  ----FWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA

Query:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLA VVKAISTKS FDVFYNPR
Subjt:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

TrEMBL top hitse value%identityAlignment
A0A1S3CKC2 Auxin response factor2.9e-12186.92Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPE-----VAFNYSIYLFWR--
        ELWHACAGPLTSLPKKGNVVVYFPQGHLEQI SSASPFSPMEMR FDL PQILC+V NV LLANKENDEVYTQLTL PLPE     VA      L     
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPE-----VAFNYSIYLFWR--

Query:  -------SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
               SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP LDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
Subjt:  -------SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA

Query:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCA+DLA VVKAISTKS FDVFYNPR
Subjt:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

A0A5A7SXJ2 Auxin response factor 42.9e-12186.92Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPE-----VAFNYSIYLFWR--
        ELWHACAGPLTSLPKKGNVVVYFPQGHLEQI SSASPFSPMEMR FDL PQILC+V NV LLANKENDEVYTQLTL PLPE     VA      L     
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPE-----VAFNYSIYLFWR--

Query:  -------SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
               SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP LDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
Subjt:  -------SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA

Query:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCA+DLA VVKAISTKS FDVFYNPR
Subjt:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

A0A5D3CVN1 Auxin response factor 42.9e-12186.92Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPE-----VAFNYSIYLFWR--
        ELWHACAGPLTSLPKKGNVVVYFPQGHLEQI SSASPFSPMEMR FDL PQILC+V NV LLANKENDEVYTQLTL PLPE     VA      L     
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPE-----VAFNYSIYLFWR--

Query:  -------SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
               SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP LDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
Subjt:  -------SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA

Query:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCA+DLA VVKAISTKS FDVFYNPR
Subjt:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

A0A6J1CFF8 Auxin response factor2.6e-13090.77Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP-------------EVAFNYS
        ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP             E+A N +
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP-------------EVAFNYS

Query:  I-YLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
               SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
Subjt:  I-YLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA

Query:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
Subjt:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

A0A6J1CG42 Auxin response factor2.6e-13090.77Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP-------------EVAFNYS
        ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP             E+A N +
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP-------------EVAFNYS

Query:  I-YLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
               SPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA
Subjt:  I-YLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDA

Query:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
Subjt:  VLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

SwissProt top hitse value%identityAlignment
O23661 Auxin response factor 32.9e-7856.64Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPE----------VAFNYSIYL
        ELWHACAGPL SLPK+G++V+YFPQGHLEQ    ++         + L P + C++ +V+L A    DEVY Q++LLP  E          +  +     
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPE----------VAFNYSIYL

Query:  FWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFL
        +      +TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP LDY+Q RPSQEL+A+DLHG+EWRF+HIYRGQPRRHLLTTGWS FV++K L+SGDAVLFL
Subjt:  FWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFL

Query:  RGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        RG++G+LRLG+RRA +       S   NQN   N+ + V  AIST S+F + YNP+
Subjt:  RGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

Q5JK20 Auxin response factor 43.8e-7854.62Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP---EVAFNYSIYLFWRSPTR
        ELWHACAGPL ++P+ G++V YFPQGH+EQ+ +S +  +  +MR +DL  ++LC+V NV+L A ++ DEVY Q+ L+P P   E+A   +         R
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLP---EVAFNYSIYLFWRSPTR

Query:  STPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGEL
             FCKTLTASDTSTHGGFSV RR A++C P LD TQ  P+QEL+AKDLH ++WRF+HI+RGQPRRHLL +GWS+FVS K L++GDA +FLRGENGEL
Subjt:  STPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGEL

Query:  RLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        R+G+RRA+R  + +P S++ +Q+     LA    AI+TKSMF V+Y PR
Subjt:  RLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

Q6YVY0 Auxin response factor 72.7e-7655.28Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTP
        ELWHACAGPL ++P++G +V YFPQGH+EQ+ +S        +  F+L  +ILCKV NV+L A  ++DEVY Q+ L P  +     S       P +   
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTP

Query:  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLG
        H FCKTLTASDTSTHGGFSV RR AE+C P LD TQ  P QEL+A+DLHG EW F+HI+RGQPRRHLLTTGWS+FVS K L++GDA +FLRGENGELR+G
Subjt:  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLG

Query:  IRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        +RR +R  N +P S++ + +     LA    AIST ++F VFY PR
Subjt:  IRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

Q8S985 Auxin response factor 151.2e-7957.94Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFNYS------IYLFWRS
        ELWHACAGP+  LP+KG VVVY PQGHLE +  + +  +     P    P + C+V +V LLA+   DEVY QL+L+P  E     +           + 
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFNYS------IYLFWRS

Query:  PTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGEN
             PHMFCKTLTASDTSTHGGFSVPRRAAEDCFP LDY+Q RPSQEL+AKDLH  EWRF+HIYRGQPRRHLLTTGWS FV++K L+SGDAVLFLRG++
Subjt:  PTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGEN

Query:  GELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        GELRLG+RRA + +NG     + NQ S    LA V  A++T+S+F+++YNPR
Subjt:  GELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

Q9ZTX9 Auxin response factor 44.4e-10373.15Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVA-----------FNYSIY
        ELWHACAGPLT LPKKGNVVVYFPQGHLEQ A   S  SP+E+  FDL+PQI+C+V NVQLLANK+ DEVYTQ+TLLPL E +                 
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVA-----------FNYSIY

Query:  LFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLF
            S  + TPHMFCKTLTASDTSTHGGFSVPRRAAEDCF  LDY Q RPSQELIAKDLHGVEW+F+HIYRGQPRRHLLTTGWSIFVSQKNL+SGDAVLF
Subjt:  LFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLF

Query:  LRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        LR E GELRLGIRRA RPRNGLPDSI+  +NSC+N L+ V  A+STKSMF VFY+PR
Subjt:  LRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

Arabidopsis top hitse value%identityAlignment
AT1G59750.1 auxin response factor 17.3e-7754.88Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTP
        ELWHACAGPL +LP++G  V YFP+GH+EQ+ +S       +M  F+L  +ILCKV N+Q  A  E DEVY Q+TLLP  + +   S     + P + T 
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTP

Query:  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLG
        H FCKTLTASDTSTHGGFSV RR A+DC P LD +Q  P QEL+A DLH  EW F+HI+RGQPRRHLLTTGWS+FVS K L++GDA +FLRGEN ELR+G
Subjt:  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLG

Query:  IRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        +RR +R +  +P S++ + +     LA    AI+T ++F VFY PR
Subjt:  IRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

AT1G59750.2 auxin response factor 17.3e-7754.88Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTP
        ELWHACAGPL +LP++G  V YFP+GH+EQ+ +S       +M  F+L  +ILCKV N+Q  A  E DEVY Q+TLLP  + +   S     + P + T 
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTP

Query:  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLG
        H FCKTLTASDTSTHGGFSV RR A+DC P LD +Q  P QEL+A DLH  EW F+HI+RGQPRRHLLTTGWS+FVS K L++GDA +FLRGEN ELR+G
Subjt:  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLG

Query:  IRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        +RR +R +  +P S++ + +     LA    AI+T ++F VFY PR
Subjt:  IRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

AT1G59750.3 auxin response factor 17.3e-7754.88Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTP
        ELWHACAGPL +LP++G  V YFP+GH+EQ+ +S       +M  F+L  +ILCKV N+Q  A  E DEVY Q+TLLP  + +   S     + P + T 
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTP

Query:  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLG
        H FCKTLTASDTSTHGGFSV RR A+DC P LD +Q  P QEL+A DLH  EW F+HI+RGQPRRHLLTTGWS+FVS K L++GDA +FLRGEN ELR+G
Subjt:  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLG

Query:  IRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        +RR +R +  +P S++ + +     LA    AI+T ++F VFY PR
Subjt:  IRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

AT2G33860.1 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related2.1e-7956.64Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPE----------VAFNYSIYL
        ELWHACAGPL SLPK+G++V+YFPQGHLEQ    ++         + L P + C++ +V+L A    DEVY Q++LLP  E          +  +     
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPE----------VAFNYSIYL

Query:  FWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFL
        +      +TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP LDY+Q RPSQEL+A+DLHG+EWRF+HIYRGQPRRHLLTTGWS FV++K L+SGDAVLFL
Subjt:  FWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFL

Query:  RGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        RG++G+LRLG+RRA +       S   NQN   N+ + V  AIST S+F + YNP+
Subjt:  RGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

AT5G60450.1 auxin response factor 43.2e-10473.15Show/hide
Query:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVA-----------FNYSIY
        ELWHACAGPLT LPKKGNVVVYFPQGHLEQ A   S  SP+E+  FDL+PQI+C+V NVQLLANK+ DEVYTQ+TLLPL E +                 
Subjt:  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVA-----------FNYSIY

Query:  LFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLF
            S  + TPHMFCKTLTASDTSTHGGFSVPRRAAEDCF  LDY Q RPSQELIAKDLHGVEW+F+HIYRGQPRRHLLTTGWSIFVSQKNL+SGDAVLF
Subjt:  LFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLF

Query:  LRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR
        LR E GELRLGIRRA RPRNGLPDSI+  +NSC+N L+ V  A+STKSMF VFY+PR
Subjt:  LRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGCTTTGGCATGCTTGTGCTGGCCCTCTCACCTCATTGCCCAAGAAAGGAAATGTAGTTGTCTACTTCCCACAAGGTCACTTGGAGCAGATTGCCTCCTCAGCCTCCCC
CTTTTCCCCCATGGAGATGCGCCCTTTTGACCTCCACCCACAGATCCTCTGCAAAGTCACCAATGTCCAACTACTTGCCAATAAGGAGAATGATGAGGTCTACACACAAC
TTACTCTACTTCCCTTACCAGAGGTAGCTTTCAACTACTCAATTTATTTATTTTGGAGATCGCCTACTAGATCTACACCTCACATGTTCTGCAAAACACTCACAGCATCT
GACACCAGTACCCACGGAGGGTTCTCTGTTCCTCGCAGAGCTGCTGAAGACTGTTTCCCAACTCTGGATTACACTCAACTTAGGCCATCTCAAGAGCTAATAGCCAAGGA
CCTGCATGGCGTGGAGTGGAGGTTTAAACATATCTACAGAGGTCAACCCAGGCGGCATCTGCTCACTACTGGGTGGAGTATTTTTGTAAGCCAAAAGAATCTTATTTCTG
GGGATGCGGTGCTCTTTCTAAGGGGTGAAAATGGAGAGCTAAGGTTGGGAATAAGGAGAGCTGTTCGGCCTAGAAATGGTCTTCCTGATTCAATTGTTGGCAACCAAAAT
TCTTGTGCAAACGATCTTGCTTGTGTGGTGAAAGCAATATCCACCAAGAGCATGTTTGATGTGTTTTACAATCCAAGG
mRNA sequenceShow/hide mRNA sequence
GAGCTTTGGCATGCTTGTGCTGGCCCTCTCACCTCATTGCCCAAGAAAGGAAATGTAGTTGTCTACTTCCCACAAGGTCACTTGGAGCAGATTGCCTCCTCAGCCTCCCC
CTTTTCCCCCATGGAGATGCGCCCTTTTGACCTCCACCCACAGATCCTCTGCAAAGTCACCAATGTCCAACTACTTGCCAATAAGGAGAATGATGAGGTCTACACACAAC
TTACTCTACTTCCCTTACCAGAGGTAGCTTTCAACTACTCAATTTATTTATTTTGGAGATCGCCTACTAGATCTACACCTCACATGTTCTGCAAAACACTCACAGCATCT
GACACCAGTACCCACGGAGGGTTCTCTGTTCCTCGCAGAGCTGCTGAAGACTGTTTCCCAACTCTGGATTACACTCAACTTAGGCCATCTCAAGAGCTAATAGCCAAGGA
CCTGCATGGCGTGGAGTGGAGGTTTAAACATATCTACAGAGGTCAACCCAGGCGGCATCTGCTCACTACTGGGTGGAGTATTTTTGTAAGCCAAAAGAATCTTATTTCTG
GGGATGCGGTGCTCTTTCTAAGGGGTGAAAATGGAGAGCTAAGGTTGGGAATAAGGAGAGCTGTTCGGCCTAGAAATGGTCTTCCTGATTCAATTGTTGGCAACCAAAAT
TCTTGTGCAAACGATCTTGCTTGTGTGGTGAAAGCAATATCCACCAAGAGCATGTTTGATGTGTTTTACAATCCAAGG
Protein sequenceShow/hide protein sequence
ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTPHMFCKTLTAS
DTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQN
SCANDLACVVKAISTKSMFDVFYNPR