; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005063 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005063
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA polymerase epsilon subunit C
Genome locationscaffold176:2416435..2418772
RNA-Seq ExpressionMS005063
SyntenyMS005063
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463933.1 PREDICTED: DNA polymerase epsilon subunit C [Cucumis melo]5.1e-7477.06Show/hide
Query:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDD--ADEDRTETTSRKAN
        MASSKKSSTEAK KEAGTSK A       K KT +NA  SDK++SKK   KKKIS     NNGS ++N+V  +S P  ++ EDD  ADED+ ETTSRK  
Subjt:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDD--ADEDRTETTSRKAN

Query:  SSKSKKVKRNHGKKEENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCK
        +SKSKKVKRNH K+E+NGY EEEEEE   EEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKDAYACCAQDRKKSLAYKHLSSVV K
Subjt:  SSKSKKVKRNHGKKEENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCK

Query:  RKRYDFLSDFVPEKLKFEDALKERSMAESGK
        RKRYDFLSDFVPEKLKFEDALKERSMAESGK
Subjt:  RKRYDFLSDFVPEKLKFEDALKERSMAESGK

XP_022140741.1 DNA polymerase epsilon subunit C [Momordica charantia]4.1e-10899.57Show/hide
Query:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSS
        MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSS
Subjt:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSS

Query:  KSKKVKRNHGKKEENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRK
        KSKKVKRNHGKKEENGYEEEEEEEEQVEEKIYKFPMHRIKKI RDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRK
Subjt:  KSKKVKRNHGKKEENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRK

Query:  RYDFLSDFVPEKLKFEDALKERSMAESGKG
        RYDFLSDFVPEKLKFEDALKERSMAESGKG
Subjt:  RYDFLSDFVPEKLKFEDALKERSMAESGKG

XP_022986059.1 DNA polymerase epsilon subunit C-like isoform X1 [Cucurbita maxima]1.5e-7376.6Show/hide
Query:  MASSKKSSTEAKSKEAGTSKSATKTKA-KAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANS
        MASSKKSS+EAKSKEAGTSK A K K         +NA K DK  SKK   K   +N KH +NGS +EN+V  ISAP       DA+EDR ETTS+  N+
Subjt:  MASSKKSSTEAKSKEAGTSKSATKTKA-KAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANS

Query:  SKSKKVKRNHGKKEENGY-----EEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSS
        SKSKKVKRNHGKKEENGY     EEEEE EE+ EEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSS
Subjt:  SKSKKVKRNHGKKEENGY-----EEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSS

Query:  VVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGK
        VVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGK
Subjt:  VVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGK

XP_023512055.1 DNA polymerase epsilon subunit C-like isoform X1 [Cucurbita pepo subsp. pepo]2.5e-7375.74Show/hide
Query:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSS
        MASSKKSS+EAKSKEAGTSK A K K        +NA   DK  SKK       +N KH +NGS +EN+V  ISAP       DA+EDR ETTS+  N++
Subjt:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSS

Query:  KSKKVKRNHGKKEENGY------EEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSS
        KSKKVKRNHGKKEENGY      EEE EEEE+VEEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSS
Subjt:  KSKKVKRNHGKKEENGY------EEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSS

Query:  VVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGK
        VVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGK
Subjt:  VVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGK

XP_023534490.1 ABC transporter F family member 4-like [Cucurbita pepo subsp. pepo]7.3e-7376.92Show/hide
Query:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSS
        MAS+KKSSTE KSKEAGTSK ATKT     TKTL NA KSDK+ SKK   KKKI + KH+NNGS +E+D   ISAP SAS E+DA E+R ETTS+KA +S
Subjt:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSS

Query:  KSKKVKRNHGKKEENGY----EEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVV
        KSK  K NH KKEENGY    EEEEEEEE+V+EKIY FPM RIKKI RDENSD RINQEALFLVNKATEMFL+QFCKDAYACCA+DRKKSLAYKHLSSVV
Subjt:  KSKKVKRNHGKKEENGY----EEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVV

Query:  CKRKRYDFLSDFVPEKLKFEDALKERSMAESGKG
         KRKRYDFLSDFVPEKLKFEDA+KE  MAESGKG
Subjt:  CKRKRYDFLSDFVPEKLKFEDALKERSMAESGKG

TrEMBL top hitse value%identityAlignment
A0A0A0KCQ2 CBFD_NFYB_HMF domain-containing protein1.0e-7275.32Show/hide
Query:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASRE--DDADEDRTETTSRKAN
        MASSKKSSTEAKSKE GTSK +       K KT +NA  SDKD+SKK   KKKIS     NNGS ++N    +SAP +++ E  D ADED+ ETTSRK+N
Subjt:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASRE--DDADEDRTETTSRKAN

Query:  SSKSKKVKRNHGKKEENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCK
        +SKSKKVKRNH K+E+N Y  EEE     EEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKDAYACCAQDRKKSLAYKHLSSVV K
Subjt:  SSKSKKVKRNHGKKEENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCK

Query:  RKRYDFLSDFVPEKLKFEDALKERSMAESGK
        RKRYDFLSDFVPEKLKFEDALKERSMAESGK
Subjt:  RKRYDFLSDFVPEKLKFEDALKERSMAESGK

A0A1S3CKU7 DNA polymerase epsilon subunit C2.5e-7477.06Show/hide
Query:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDD--ADEDRTETTSRKAN
        MASSKKSSTEAK KEAGTSK A       K KT +NA  SDK++SKK   KKKIS     NNGS ++N+V  +S P  ++ EDD  ADED+ ETTSRK  
Subjt:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDD--ADEDRTETTSRKAN

Query:  SSKSKKVKRNHGKKEENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCK
        +SKSKKVKRNH K+E+NGY EEEEEE   EEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKDAYACCAQDRKKSLAYKHLSSVV K
Subjt:  SSKSKKVKRNHGKKEENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCK

Query:  RKRYDFLSDFVPEKLKFEDALKERSMAESGK
        RKRYDFLSDFVPEKLKFEDALKERSMAESGK
Subjt:  RKRYDFLSDFVPEKLKFEDALKERSMAESGK

A0A6J1CGZ0 DNA polymerase epsilon subunit C2.0e-10899.57Show/hide
Query:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSS
        MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSS
Subjt:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSS

Query:  KSKKVKRNHGKKEENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRK
        KSKKVKRNHGKKEENGYEEEEEEEEQVEEKIYKFPMHRIKKI RDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRK
Subjt:  KSKKVKRNHGKKEENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRK

Query:  RYDFLSDFVPEKLKFEDALKERSMAESGKG
        RYDFLSDFVPEKLKFEDALKERSMAESGKG
Subjt:  RYDFLSDFVPEKLKFEDALKERSMAESGKG

A0A6J1FVY8 DNA polymerase epsilon subunit C-like isoform X11.8e-7277.06Show/hide
Query:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISN-KKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANS
        MASSKKSS+EAKSKEAGTSK A   K        +NA   DK  SK    KKK+SN  KH +NGS +EN+V  ISAP       DA+EDR ETTS+  N+
Subjt:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISN-KKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANS

Query:  SKSKKVKRNHGKKEENGY-EEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCK
        SKSKKVKRN GKKE+NGY EEEEE EE+ EEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCK
Subjt:  SKSKKVKRNHGKKEENGY-EEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCK

Query:  RKRYDFLSDFVPEKLKFEDALKERSMAESGK
        RKRYDFLSDFVPEKLKFEDALKERSMAESGK
Subjt:  RKRYDFLSDFVPEKLKFEDALKERSMAESGK

A0A6J1JF10 DNA polymerase epsilon subunit C-like isoform X17.2e-7476.6Show/hide
Query:  MASSKKSSTEAKSKEAGTSKSATKTKA-KAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANS
        MASSKKSS+EAKSKEAGTSK A K K         +NA K DK  SKK   K   +N KH +NGS +EN+V  ISAP       DA+EDR ETTS+  N+
Subjt:  MASSKKSSTEAKSKEAGTSKSATKTKA-KAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANS

Query:  SKSKKVKRNHGKKEENGY-----EEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSS
        SKSKKVKRNHGKKEENGY     EEEEE EE+ EEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSS
Subjt:  SKSKKVKRNHGKKEENGY-----EEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSS

Query:  VVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGK
        VVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGK
Subjt:  VVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGK

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-44.4e-0427.72Show/hide
Query:  EEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALKERS
        E+  + K +  P+ RIKKIM+ +     I+ EA  +  KA E+F+++    ++    ++++++L    +++ + +   YDFL D VP      D LKE  
Subjt:  EEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALKERS

Query:  M
        +
Subjt:  M

Q8LCG7 Nuclear transcription factor Y subunit C-27.5e-0427.88Show/hide
Query:  EEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALK
        +E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ + +   +DFL D +P      D LK
Subjt:  EEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALK

Query:  ERSM
        E  +
Subjt:  ERSM

Q9JKP8 Chromatin accessibility complex protein 11.0e-0532.71Show/hide
Query:  EEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL---KFEDAL
        +E+  ++++   P+ RI+ IM+       INQEAL L  KATE+F+      +Y   +   KK+L Y  L+S     +   FL+D +P+K+   K+   L
Subjt:  EEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL---KFEDAL

Query:  KERSMAE
        KE+   E
Subjt:  KERSMAE

Q9NRG0 Chromatin accessibility complex protein 11.6e-0633.33Show/hide
Query:  EEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL---KFEDALKERSM
        E+++   P+ RI+ IM+       INQEAL L  KATE+F+      +Y   +   KK L Y  L++   + + + FL+D +P+K+   K+   LKE   
Subjt:  EEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL---KFEDALKERSM

Query:  AE
         E
Subjt:  AE

Q9V452 Chromatin accessibility complex 16kD protein1.0e-0535.05Show/hide
Query:  PMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYA-CCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLK---FEDALKERSMAES
        P+ R++ IM+       I  E LFL+ K TE+F+      AY     Q   ++L Y+HLS VV K K  +FL   VP+K++   F++ L+    A S
Subjt:  PMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYA-CCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLK---FEDALKERSMAES

Arabidopsis top hitse value%identityAlignment
AT1G07980.1 nuclear factor Y, subunit C105.5e-1837.34Show/hide
Query:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSS
        M SSKK   +    +   +K++ ++K  + ++T            KK +NK  I  KK          +++EIS    +S  D  +E      ++K+N  
Subjt:  MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSS

Query:  KSKKVKRNHGKK---EENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVC
         S   KR +GK         +  EE++   E+   KFPM+RI++IMR +NS  +I Q+A+FLVNKATEMF+ +F ++AY    +D+KK + YKHLSSVV 
Subjt:  KSKKVKRNHGKK---EENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVC

Query:  KRKRYDFLSDFVPEKLKFEDALK--ERSMAESG
          +RY+FL+D VPEKLK E AL+  ER M ++G
Subjt:  KRKRYDFLSDFVPEKLKFEDALK--ERSMAESG

AT1G56170.1 nuclear factor Y, subunit C25.3e-0527.88Show/hide
Query:  EEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALK
        +E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ + +   +DFL D +P      D LK
Subjt:  EEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALK

Query:  ERSM
        E  +
Subjt:  ERSM

AT1G56170.2 nuclear factor Y, subunit C25.3e-0527.88Show/hide
Query:  EEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALK
        +E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ + +   +DFL D +P      D LK
Subjt:  EEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALK

Query:  ERSM
        E  +
Subjt:  ERSM

AT5G63470.1 nuclear factor Y, subunit C45.3e-0530Show/hide
Query:  EEEEEEQVEE-KIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVP-EKLKFED
        + +E EQV + K ++ P+ RIKKIM+ +     I+ EA  L  KA E+F+++    ++    ++++++L    +++ + +   +DFL D VP E++K E+
Subjt:  EEEEEEQVEE-KIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVP-EKLKFED

AT5G63470.2 nuclear factor Y, subunit C45.3e-0530Show/hide
Query:  EEEEEEQVEE-KIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVP-EKLKFED
        + +E EQV + K ++ P+ RIKKIM+ +     I+ EA  L  KA E+F+++    ++    ++++++L    +++ + +   +DFL D VP E++K E+
Subjt:  EEEEEEQVEE-KIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVP-EKLKFED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGTCCAAAAAATCTAGTACTGAAGCGAAGAGCAAAGAAGCGGGAACATCGAAATCAGCCACCAAAACCAAAGCCAAAGCCAAAACCAAAACCCTCAGCAACGC
CACAAAATCCGACAAGGACGTTTCCAAGAAGAACAACAACAAGAAGAAGATTAGCAACAAGAAGCACGCCAACAATGGCTCCGCCGAGGAGAACGACGTCTTTGAGATCT
CTGCTCCAGATTCAGCATCTAGAGAGGACGACGCCGATGAAGACAGAACCGAAACCACGAGTAGAAAAGCTAACAGCTCGAAATCGAAGAAAGTAAAGCGGAACCATGGG
AAGAAGGAAGAGAATGGTTACGAAGAAGAAGAAGAAGAAGAAGAACAAGTCGAGGAGAAGATTTACAAATTCCCAATGCATCGGATCAAAAAAATCATGAGGGACGAAAA
TTCTGATTTACGTATAAATCAGGAAGCCTTGTTTCTCGTCAACAAAGCCACGGAGATGTTTCTCGTACAATTTTGCAAAGATGCTTATGCTTGCTGTGCTCAGGATCGGA
AAAAGTCTCTTGCTTACAAGCATCTATCATCGGTAGTTTGTAAAAGGAAGAGGTATGACTTTCTTTCAGATTTTGTCCCAGAAAAATTAAAATTTGAAGATGCGTTAAAG
GAGAGAAGCATGGCGGAATCAGGGAAAGGC
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGTCCAAAAAATCTAGTACTGAAGCGAAGAGCAAAGAAGCGGGAACATCGAAATCAGCCACCAAAACCAAAGCCAAAGCCAAAACCAAAACCCTCAGCAACGC
CACAAAATCCGACAAGGACGTTTCCAAGAAGAACAACAACAAGAAGAAGATTAGCAACAAGAAGCACGCCAACAATGGCTCCGCCGAGGAGAACGACGTCTTTGAGATCT
CTGCTCCAGATTCAGCATCTAGAGAGGACGACGCCGATGAAGACAGAACCGAAACCACGAGTAGAAAAGCTAACAGCTCGAAATCGAAGAAAGTAAAGCGGAACCATGGG
AAGAAGGAAGAGAATGGTTACGAAGAAGAAGAAGAAGAAGAAGAACAAGTCGAGGAGAAGATTTACAAATTCCCAATGCATCGGATCAAAAAAATCATGAGGGACGAAAA
TTCTGATTTACGTATAAATCAGGAAGCCTTGTTTCTCGTCAACAAAGCCACGGAGATGTTTCTCGTACAATTTTGCAAAGATGCTTATGCTTGCTGTGCTCAGGATCGGA
AAAAGTCTCTTGCTTACAAGCATCTATCATCGGTAGTTTGTAAAAGGAAGAGGTATGACTTTCTTTCAGATTTTGTCCCAGAAAAATTAAAATTTGAAGATGCGTTAAAG
GAGAGAAGCATGGCGGAATCAGGGAAAGGC
Protein sequenceShow/hide protein sequence
MASSKKSSTEAKSKEAGTSKSATKTKAKAKTKTLSNATKSDKDVSKKNNNKKKISNKKHANNGSAEENDVFEISAPDSASREDDADEDRTETTSRKANSSKSKKVKRNHG
KKEENGYEEEEEEEEQVEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALK
ERSMAESGKG