; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005096 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005096
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold176:2667412..2667708
RNA-Seq ExpressionMS005096
SyntenyMS005096
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035234.1 hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa]3.3e-2273.81Show/hide
Query:  MGARCVPPSAPSTIVEPL-----GTQDYHTLKPH-TNPKRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTD-STNT
        M ARCVPPSAPSTIV PL       +DY T+KP   N KRLVFGG ++KSCLPKGFRRSSAPSRFVNYHTSGGCS TTD S NT
Subjt:  MGARCVPPSAPSTIVEPL-----GTQDYHTLKPH-TNPKRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTD-STNT

KAE8646888.1 hypothetical protein Csa_020968, partial [Cucumis sativus]7.6e-2770.59Show/hide
Query:  MASLFPF---VLVLVLVLCSPRLSMGARCVPPSAPSTIVEPLGTQD----YHTLKPH-TNPKRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSGGCSST
        MASLFP+    L+ +L+L SP  SM ARCVPPSAPSTIV PL T D    Y T+KP   N KRLVFGG ++KSCLPKGFRRSSAPSRFVNYHTSGGCS T
Subjt:  MASLFPF---VLVLVLVLCSPRLSMGARCVPPSAPSTIVEPLGTQD----YHTLKPH-TNPKRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSGGCSST

Query:  TD
        TD
Subjt:  TD

KAF4346374.1 hypothetical protein G4B88_012912 [Cannabis sativa]3.0e-1559.04Show/hide
Query:  MGARCVPPSAPSTIVEPLGTQD---YHTLKPHTNP-KRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSG---GCSSTTDSTN
        MG R +P SAPST+V PL T D   Y T++PH NP ++ VF   D K CLPKGFR +SAPSRFVNYHT G   GCSS    TN
Subjt:  MGARCVPPSAPSTIVEPLGTQD---YHTLKPHTNP-KRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSG---GCSSTTDSTN

KAG6570806.1 hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sororia]8.7e-3174.29Show/hide
Query:  MASLFPFV--LVLVLVLCSPRLSMGARCVPPSAPSTIVEPLGT---QDYHTLKPHTNPKRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTD-
        MASLFPF+  L+ +L+L SP  SM ARCVPPSAPSTIV PL T   +DY T+KP  N KRLVFGG ++KSCLPKGFRRSSAPSRFVNYHTSGGCSSTTD 
Subjt:  MASLFPFV--LVLVLVLCSPRLSMGARCVPPSAPSTIVEPLGT---QDYHTLKPHTNPKRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTD-

Query:  STNTP
        S NTP
Subjt:  STNTP

PON66506.1 hypothetical protein PanWU01x14_109280, partial [Parasponia andersonii]6.7e-1552.48Show/hide
Query:  SLFPFVL---VLVLVLCSPRLSMGARCVPPSAPSTIVEPLGT---QDYHTLKPHTNP-KRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSG----GCSS
        SL+  +L   +++L+L S  +SM  R +P SAPST+V PL T   QDY +L+PH NP +  VF G + K CLPKGFR +SAPSRFVNYH  G    GCSS
Subjt:  SLFPFVL---VLVLVLCSPRLSMGARCVPPSAPSTIVEPLGT---QDYHTLKPHTNP-KRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSG----GCSS

Query:  T
        +
Subjt:  T

TrEMBL top hitse value%identityAlignment
A0A0A0KDD3 Uncharacterized protein6.3e-2770.09Show/hide
Query:  MASLFPF---VLVLVLVLCSPRLSMGARCVPPSAPSTIVEPLGTQD----YHTLKPH-TNPKRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSGGCSST
        MASLFP+    L+ +L+L SP  SM ARCVPPSAPSTIV PL T D    Y T+KP   N KRLVFGG ++KSCLPKGFRRSSAPSRFVNYHTSGGCS T
Subjt:  MASLFPF---VLVLVLVLCSPRLSMGARCVPPSAPSTIVEPLGTQD----YHTLKPH-TNPKRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSGGCSST

Query:  TD-STNT
        TD S NT
Subjt:  TD-STNT

A0A2P5CZN8 Uncharacterized protein (Fragment)3.2e-1552.48Show/hide
Query:  SLFPFVL---VLVLVLCSPRLSMGARCVPPSAPSTIVEPLGT---QDYHTLKPHTNP-KRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSG----GCSS
        SL+  +L   +++L+L S  +SM  R +P SAPST+V PL T   QDY +L+PH NP +  VF G + K CLPKGFR +SAPSRFVNYH  G    GCSS
Subjt:  SLFPFVL---VLVLVLCSPRLSMGARCVPPSAPSTIVEPLGT---QDYHTLKPHTNP-KRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSG----GCSS

Query:  T
        +
Subjt:  T

A0A5D3DGK4 Uncharacterized protein1.6e-2273.81Show/hide
Query:  MGARCVPPSAPSTIVEPL-----GTQDYHTLKPH-TNPKRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTD-STNT
        M ARCVPPSAPSTIV PL       +DY T+KP   N KRLVFGG ++KSCLPKGFRRSSAPSRFVNYHTSGGCS TTD S NT
Subjt:  MGARCVPPSAPSTIVEPL-----GTQDYHTLKPH-TNPKRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTD-STNT

A0A7J6FMM6 Uncharacterized protein1.5e-1559.04Show/hide
Query:  MGARCVPPSAPSTIVEPLGTQD---YHTLKPHTNP-KRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSG---GCSSTTDSTN
        MG R +P SAPST+V PL T D   Y T++PH NP ++ VF   D K CLPKGFR +SAPSRFVNYHT G   GCSS    TN
Subjt:  MGARCVPPSAPSTIVEPLGTQD---YHTLKPHTNP-KRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSG---GCSSTTDSTN

A0A803Q0F1 Uncharacterized protein5.3e-1856.7Show/hide
Query:  VLVLVLVLCSPRLSMGARCVPPSAPSTIVEPLGTQD---YHTLKPHTNP-KRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSG---GCSSTTDSTN
        V+VL+L++C   +SMG R +P SAPST+V PL T D   Y T++PH NP ++ VF   D K CLPKGFR +SAPSRFVNYHT G   GCSS    TN
Subjt:  VLVLVLVLCSPRLSMGARCVPPSAPSTIVEPLGTQD---YHTLKPHTNP-KRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSG---GCSSTTDSTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTCTTTTCCCATTTGTTCTCGTTCTGGTTCTGGTTCTGTGTTCTCCCAGGCTGTCCATGGGCGCGCGGTGCGTTCCCCCGAGCGCCCCCAGCACCATCGTCGA
GCCTCTCGGCACCCAAGACTACCACACCCTCAAGCCTCACACGAACCCAAAGAGGCTCGTCTTTGGCGGCACCGATCTCAAAAGTTGCCTCCCCAAAGGCTTCCGCCGCT
CCTCCGCCCCCAGCCGCTTCGTTAACTACCATACTTCCGGCGGTTGTTCTTCAACCACAGACTCCACCAACACCCCT
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCTCTTTTCCCATTTGTTCTCGTTCTGGTTCTGGTTCTGTGTTCTCCCAGGCTGTCCATGGGCGCGCGGTGCGTTCCCCCGAGCGCCCCCAGCACCATCGTCGA
GCCTCTCGGCACCCAAGACTACCACACCCTCAAGCCTCACACGAACCCAAAGAGGCTCGTCTTTGGCGGCACCGATCTCAAAAGTTGCCTCCCCAAAGGCTTCCGCCGCT
CCTCCGCCCCCAGCCGCTTCGTTAACTACCATACTTCCGGCGGTTGTTCTTCAACCACAGACTCCACCAACACCCCT
Protein sequenceShow/hide protein sequence
MASLFPFVLVLVLVLCSPRLSMGARCVPPSAPSTIVEPLGTQDYHTLKPHTNPKRLVFGGTDLKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDSTNTP