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MS005119 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005119
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold176:2823019..2823317
RNA-Seq ExpressionMS005119
SyntenyMS005119
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570826.1 hypothetical protein SDJN03_29741, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2898.48Show/hide
Query:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
KAG7010668.1 hypothetical protein SDJN02_27463, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-2898.48Show/hide
Query:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_008465426.1 PREDICTED: uncharacterized protein LOC103503042 [Cucumis melo]1.3e-2894.2Show/hide
Query:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M+RRRN+IVA GLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_022140323.1 uncharacterized protein LOC111011024 [Momordica charantia]6.7e-3097.1Show/hide
Query:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M+RRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_022944261.1 uncharacterized protein LOC111448766 [Cucurbita moschata]2.2e-2898.48Show/hide
Query:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
TrEMBL top hitse value%identityAlignment
A0A1S3CQB9 uncharacterized protein LOC1035030426.1e-2994.2Show/hide
Query:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M+RRRN+IVA GLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A2P5DD11 Transmembrane protein5.7e-2788.41Show/hide
Query:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MSR RN+IVA GL+AFA+AGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPD+QTY KK
Subjt:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1CHR8 uncharacterized protein LOC1110110243.2e-3097.1Show/hide
Query:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M+RRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1FTX8 uncharacterized protein LOC1114487661.0e-2898.48Show/hide
Query:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1JB19 uncharacterized protein LOC1114841573.0e-2896.97Show/hide
Query:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        R+NIIVATGLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G22875.1 unknown protein1.6e-2985.51Show/hide
Query:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M+  RNI+VATGL+ FASAGLAFPFYMASSK+PVIDP KPLPPQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
AT5G22875.2 unknown protein1.6e-2985.51Show/hide
Query:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M+  RNI+VATGL+ FASAGLAFPFYMASSK+PVIDP KPLPPQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACGTCGTCGAAATATTATCGTTGCCACTGGATTGATAGCCTTTGCATCTGCTGGGTTGGCATTTCCCTTTTACATGGCGTCTTCCAAAAAGCCAGTTATTGATCC
GGGAAAGCCACTTCCTCCGCAGGCAACTTTTCGAGGTCCTTACATAAACACTGGTTCTCGAGACGTCGGACCCGACCATCAAACTTATACTAAGAAG
mRNA sequenceShow/hide mRNA sequence
ATGTCACGTCGTCGAAATATTATCGTTGCCACTGGATTGATAGCCTTTGCATCTGCTGGGTTGGCATTTCCCTTTTACATGGCGTCTTCCAAAAAGCCAGTTATTGATCC
GGGAAAGCCACTTCCTCCGCAGGCAACTTTTCGAGGTCCTTACATAAACACTGGTTCTCGAGACGTCGGACCCGACCATCAAACTTATACTAAGAAG
Protein sequenceShow/hide protein sequence
MSRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVGPDHQTYTKK