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MS005138 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005138
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAT-hook motif nuclear-localized protein
Genome locationscaffold176:2971691..2972070
RNA-Seq ExpressionMS005138
SyntenyMS005138
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003680 - AT DNA binding (molecular function)
InterPro domainsIPR005175 - PPC domain
IPR039605 - AT-hook motif nuclear-localized protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606014.1 AT-hook motif nuclear-localized protein 10, partial [Cucurbita argyrosperma subsp. sororia]9.7e-2258Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL
        DIV+ ++ FS KG RAICI++A GSVS+V L Q  + P T  +FQGMFEILR++GSF+ Q    + K G ++ISLA P+GRVFGGVVA++LIAA PIQ++
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL

KAG7035963.1 AT-hook motif nuclear-localized protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-2258Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL
        DIV+ ++ FS KG RAICI++A GSVS+V L Q  + P T  +FQGMFEILR++GSF+ Q    + K G ++ISLA P+GRVFGGVVA++LIAA PIQ++
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL

XP_022140632.1 AT-hook motif nuclear-localized protein 9-like [Momordica charantia]4.1e-4496Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL
        DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTA TQIKKGHLT+SLAEPNGRVFGGVVANSLIAAGPIQ++
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL

XP_022958437.1 AT-hook motif nuclear-localized protein 9-like [Cucurbita moschata]9.7e-2258Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL
        DIV+ ++ FS KG RAICI++A GSVS+V L Q  + P T  +FQGMFEILR++GSF+ Q    + K G ++ISLA P+GRVFGGVVA++LIAA PIQ++
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL

XP_022996227.1 AT-hook motif nuclear-localized protein 9-like isoform X2 [Cucurbita maxima]9.7e-2258Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL
        DIV+ ++ FS KG RAICI++A GSVS+V L Q  + P T  +FQGMFEILR++GSF+ Q    + K G ++ISLA P+GRVFGGVVA++LIAA PIQ++
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL

TrEMBL top hitse value%identityAlignment
A0A6A6NAX2 AT-hook motif nuclear-localized protein5.2e-2155.45Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSF-IRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV
        DIV +++SF+ +GSRAICIL+ATG+VS+V++ QP S+   +LR++G+FEIL LSGSF + +T+    K G L +SLA+P+GRVFGG +  SLIA+GPIQ+
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSF-IRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV

Query:  L
        +
Subjt:  L

A0A6J1CHK6 AT-hook motif nuclear-localized protein2.0e-4496Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL
        DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTA TQIKKGHLT+SLAEPNGRVFGGVVANSLIAAGPIQ++
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL

A0A6J1H1U0 AT-hook motif nuclear-localized protein4.7e-2258Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL
        DIV+ ++ FS KG RAICI++A GSVS+V L Q  + P T  +FQGMFEILR++GSF+ Q    + K G ++ISLA P+GRVFGGVVA++LIAA PIQ++
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL

A0A6J1K1C1 AT-hook motif nuclear-localized protein4.7e-2258Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL
        DIV+ ++ FS KG RAICI++A GSVS+V L Q  + P T  +FQGMFEILR++GSF+ Q    + K G ++ISLA P+GRVFGGVVA++LIAA PIQ++
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL

A0A6J1K446 AT-hook motif nuclear-localized protein4.7e-2258Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL
        DIV+ ++ FS KG RAICI++A GSVS+V L Q  + P T  +FQGMFEILR++GSF+ Q    + K G ++ISLA P+GRVFGGVVA++LIAA PIQ++
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL

SwissProt top hitse value%identityAlignment
O49658 AT-hook motif nuclear-localized protein 24.0e-1850.5Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAH-TQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV
        D+ +R+ SFS +GS AIC+L A G VS+V L QP S+  T L ++G FEIL LSG+F+   +  T+ + G +++SLA P+GRV GG VA  L+AA PIQV
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAH-TQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV

Query:  L
        +
Subjt:  L

O80834 AT-hook motif nuclear-localized protein 91.8e-1847.52Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQT-AHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV
        DI  +V +FS +G RAIC+L+A+G+VST  L QP+++P  + +++G FEIL LS S+I  T    + + G+L++SLA P+GRV GG +   LIAA P+QV
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQT-AHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV

Query:  L
        +
Subjt:  L

Q4V3E0 AT-hook motif nuclear-localized protein 71.5e-1752.48Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIR-QTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV
        DI  R+ SFS +G RAICIL+A G +S V L QP S   T L ++G FEIL LSGSF+  +   ++ + G +++SLA P+GRV GG VA  LIAA PIQV
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIR-QTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV

Query:  L
        +
Subjt:  L

Q8VYJ2 AT-hook motif nuclear-localized protein 11.2e-1746.53Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFI-RQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV
        D+  ++ SFS +G R+IC+L+A G +S+V L QP S+  T L ++G FEIL LSGSF+   +  T+ + G +++SLA P+GRV GG +A  L+AA P+QV
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFI-RQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV

Query:  L
        +
Subjt:  L

Q9LVB0 AT-hook motif nuclear-localized protein 67.3e-2052.48Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFI-RQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV
        D+  +V  +S +GSRAICIL+ATGS+S V L QP +N    L ++G FEIL LSGSF+  +   T+ + G ++ISLA PNG +FGG +A  LIAAGP+QV
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFI-RQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV

Query:  L
        +
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT2G45850.1 AT hook motif DNA-binding family protein1.3e-1947.52Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQT-AHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV
        DI  +V +FS +G RAIC+L+A+G+VST  L QP+++P  + +++G FEIL LS S+I  T    + + G+L++SLA P+GRV GG +   LIAA P+QV
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQT-AHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV

Query:  L
        +
Subjt:  L

AT2G45850.2 AT hook motif DNA-binding family protein1.3e-1947.52Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQT-AHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV
        DI  +V +FS +G RAIC+L+A+G+VST  L QP+++P  + +++G FEIL LS S+I  T    + + G+L++SLA P+GRV GG +   LIAA P+QV
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQT-AHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV

Query:  L
        +
Subjt:  L

AT4G12080.1 AT-hook motif nuclear-localized protein 18.2e-1946.53Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFI-RQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV
        D+  ++ SFS +G R+IC+L+A G +S+V L QP S+  T L ++G FEIL LSGSF+   +  T+ + G +++SLA P+GRV GG +A  L+AA P+QV
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFI-RQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV

Query:  L
        +
Subjt:  L

AT4G22770.1 AT hook motif DNA-binding family protein2.8e-1950.5Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAH-TQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV
        D+ +R+ SFS +GS AIC+L A G VS+V L QP S+  T L ++G FEIL LSG+F+   +  T+ + G +++SLA P+GRV GG VA  L+AA PIQV
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAH-TQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV

Query:  L
        +
Subjt:  L

AT5G62260.1 AT hook motif DNA-binding family protein5.2e-2152.48Show/hide
Query:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFI-RQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV
        D+  +V  +S +GSRAICIL+ATGS+S V L QP +N    L ++G FEIL LSGSF+  +   T+ + G ++ISLA PNG +FGG +A  LIAAGP+QV
Subjt:  DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFI-RQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQV

Query:  L
        +
Subjt:  L


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATATAGTGGAGAGAGTAGCATCATTCTCAAGTAAAGGTAGTAGAGCAATATGCATACTTGCTGCAACTGGTTCAGTTTCCACCGTTCTACTCCATCAACCTGCTTCTAA
CCCTCCCACCGTCTTGAGATTCCAGGGTATGTTCGAGATTCTGCGTCTGTCTGGATCCTTTATCCGCCAAACGGCCCATACCCAAATCAAGAAGGGTCACCTCACCATCT
CCCTGGCCGAACCCAACGGTCGAGTTTTTGGTGGTGTCGTTGCTAATTCACTCATTGCTGCTGGCCCTATTCAGGTACTT
mRNA sequenceShow/hide mRNA sequence
GATATAGTGGAGAGAGTAGCATCATTCTCAAGTAAAGGTAGTAGAGCAATATGCATACTTGCTGCAACTGGTTCAGTTTCCACCGTTCTACTCCATCAACCTGCTTCTAA
CCCTCCCACCGTCTTGAGATTCCAGGGTATGTTCGAGATTCTGCGTCTGTCTGGATCCTTTATCCGCCAAACGGCCCATACCCAAATCAAGAAGGGTCACCTCACCATCT
CCCTGGCCGAACCCAACGGTCGAGTTTTTGGTGGTGTCGTTGCTAATTCACTCATTGCTGCTGGCCCTATTCAGGTACTT
Protein sequenceShow/hide protein sequence
DIVERVASFSSKGSRAICILAATGSVSTVLLHQPASNPPTVLRFQGMFEILRLSGSFIRQTAHTQIKKGHLTISLAEPNGRVFGGVVANSLIAAGPIQVL