CuGenDBv2

Gene ID	MS005165
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein BIC2
Genome location	scaffold176:3210523..3210825
RNA-Seq Expression	MS005165
Synteny	MS005165
Gene Ontology terms	GO:0009785 - blue light signaling pathway (biological process)
InterPro domains	IPR040374 - Protein BIC

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6570486.1 Protein HIRA, partial [Cucurbita argyrosperma subsp. sororia]

4.0e-23

75.27

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Query:  NPASAAAPESHDGS------GVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRR
        N   AAAP   DGS      G EKL    K  CG RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAA RIA+ARASL AEGRR
Subjt:  NPASAAAPESHDGS------GVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRR

KGN46948.1 hypothetical protein Csa_020684 [Cucumis sativus]

5.6e-25

72.55

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Query:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPA-LRVES
        +PA  +  +S  G G EKL    K   GVRERLKRHREEVAGKV VPEKWGKEELLKDWIDYSAFDRILAA RIA+ARASLAAEG+R  NSR +  RVES
Subjt:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPA-LRVES

Query:  RC
        RC
Subjt:  RC

TYK18920.1 uncharacterized protein E5676_scaffold28061G00010 [Cucumis melo var. makuwa]

5.0e-26

72.28

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Query:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR
        +PA A+  +S    G EKL    K  CGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAA RIA+ARASLAAEG++   +R   RVESR
Subjt:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR

Query:  C
        C
Subjt:  C

XP_008458586.1 PREDICTED: uncharacterized protein LOC103497945 [Cucumis melo]

1.1e-25

71.29

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Query:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR
        +PA A+  +S    G EKL    K  CGVRERLKRHREEVAGKVTVP+KWGKEELLKDWIDYSAFDRILAA RIA+ARASLAAEG++   +R   RVESR
Subjt:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR

Query:  C
        C
Subjt:  C

XP_022153004.1 protein BIC2 [Momordica charantia]

4.4e-46

100

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Query:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR
        NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR
Subjt:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR

Query:  C
        C
Subjt:  C

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBS7 Uncharacterized protein

2.7e-25

72.55

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Query:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPA-LRVES
        +PA  +  +S  G G EKL    K   GVRERLKRHREEVAGKV VPEKWGKEELLKDWIDYSAFDRILAA RIA+ARASLAAEG+R  NSR +  RVES
Subjt:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPA-LRVES

Query:  RC
        RC
Subjt:  RC

A0A1S3C9F3 uncharacterized protein LOC103497945

5.4e-26

71.29

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Query:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR
        +PA A+  +S    G EKL    K  CGVRERLKRHREEVAGKVTVP+KWGKEELLKDWIDYSAFDRILAA RIA+ARASLAAEG++   +R   RVESR
Subjt:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR

Query:  C
        C
Subjt:  C

A0A5A7STT7 Uncharacterized protein

5.4e-26

71.29

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Query:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR
        +PA A+  +S    G EKL    K  CGVRERLKRHREEVAGKVTVP+KWGKEELLKDWIDYSAFDRILAA RIA+ARASLAAEG++   +R   RVESR
Subjt:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR

Query:  C
        C
Subjt:  C

A0A5D3D5X1 Uncharacterized protein

2.4e-26

72.28

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Query:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR
        +PA A+  +S    G EKL    K  CGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAA RIA+ARASLAAEG++   +R   RVESR
Subjt:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR

Query:  C
        C
Subjt:  C

A0A6J1DHR5 protein BIC2

2.1e-46

100

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Query:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR
        NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR
Subjt:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESR

Query:  C
        C
Subjt:  C

SwissProt top hits

e value

%identity

Alignment

Q9LXJ1 Protein BIC1

5.1e-13

45.1

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Query:  ASAAAPESHDGSGVEKLLQPSKSSCGV---RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVES
        AS+ + +  D + +E+  + S+    V   RERLK+HR E+AG+V +PE WG+EELLKDWID S FD  L    I++AR +L  E RRAA++   L   +
Subjt:  ASAAAPESHDGSGVEKLLQPSKSSCGV---RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVES

Query:  RC
        RC
Subjt:  RC

Q9M280 Protein BIC2

6.6e-13

44.76

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Query:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEG---RRAANSRP-ALR
        +P S+   ++  G+   K   P  +    R+RLKRHREEVAGKV +P+ WGKE LL  W+D+S FD    + +I +ARA+L A+      A  SRP  LR
Subjt:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEG---RRAANSRP-ALR

Query:  VESRC
        VES C
Subjt:  VESRC

Arabidopsis top hits

e value

%identity

Alignment

AT3G44450.1 unknown protein

4.7e-14

44.76

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Query:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEG---RRAANSRP-ALR
        +P S+   ++  G+   K   P  +    R+RLKRHREEVAGKV +P+ WGKE LL  W+D+S FD    + +I +ARA+L A+      A  SRP  LR
Subjt:  NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEG---RRAANSRP-ALR

Query:  VESRC
        VES C
Subjt:  VESRC

AT3G52740.1 unknown protein

3.6e-14

45.1

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Query:  ASAAAPESHDGSGVEKLLQPSKSSCGV---RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVES
        AS+ + +  D + +E+  + S+    V   RERLK+HR E+AG+V +PE WG+EELLKDWID S FD  L    I++AR +L  E RRAA++   L   +
Subjt:  ASAAAPESHDGSGVEKLLQPSKSSCGV---RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVES

Query:  RC
        RC
Subjt:  RC

Sequences

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CDS sequence

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AACCCCGCCTCCGCGGCTGCTCCCGAGTCGCACGACGGCAGCGGAGTTGAGAAGTTGCTGCAGCCATCGAAGAGTTCTTGCGGGGTCCGCGAGCGGCTAAAGCGGCACCG
CGAGGAGGTGGCGGGGAAAGTCACCGTGCCGGAGAAATGGGGCAAGGAGGAGCTGCTTAAGGACTGGATCGACTACTCCGCGTTCGACAGAATCTTGGCCGCCAAGAGAA
TTGCGACGGCGAGGGCGTCGCTTGCGGCGGAGGGACGGCGGGCAGCCAATTCCCGGCCGGCGTTGAGGGTAGAGAGTAGGTGT

mRNA sequence

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Protein sequence

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NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC

MS005165 (gene) of Bitter gourd (TR) v1 genome