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MS005183 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005183
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAC domain-containing protein 40
Genome locationscaffold176:3333716..3336648
RNA-Seq ExpressionMS005183
SyntenyMS005183
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010338.1 hypothetical protein SDJN02_27131, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-3483.65Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ
        MSRSMLLVFLFVILIITSQFEW+QQLVPEV+T  NSQKQQQIS REEAVKE+I+LSQERNIQRLNEVVRSLRE+LQQC+G  +NITNGT L+S HILEL+
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ

Query:  RLRV
        RL V
Subjt:  RLRV

XP_016900731.1 PREDICTED: NAC domain-containing protein 40 [Cucumis melo]9.2e-3481.48Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQK-QQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILEL
        MSRSMLLVFLFVILIITSQFEWRQQLVPEV+T  NSQK QQQIS REEAVKE+I+LSQERNIQRLNEVVRSLR++LQQC+G  +NITNGT L++ HILEL
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQK-QQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILEL

Query:  QRLRVLDD
        +RL VL+D
Subjt:  QRLRVLDD

XP_022153051.1 uncharacterized protein LOC111020647 [Momordica charantia]1.7e-43100Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ
        MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ

Query:  RLRV
        RLRV
Subjt:  RLRV

XP_022944563.1 uncharacterized protein LOC111448980 [Cucurbita moschata]2.2e-3583.18Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ
        MSRSMLLVFLFVILIITSQFEW+QQLVPEV+T  NSQKQQQIS REEAVKE+I+LSQERNIQRLNEVVRSLRE+LQQC+G  +NITNGT L+S HILEL+
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ

Query:  RLRVLDD
        RL VL+D
Subjt:  RLRVLDD

XP_023512164.1 uncharacterized protein LOC111776968 [Cucurbita pepo subsp. pepo]3.7e-3583.18Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ
        MSRSMLLVFLFVILIITSQFEW+QQLVPEV T  NSQKQQQIS REEAVKE+I+LSQERNIQRLNEVVRSLRE+LQQC+G  +NITNGT L+S HILEL+
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ

Query:  RLRVLDD
        RL VL+D
Subjt:  RLRVLDD

TrEMBL top hitse value%identityAlignment
A0A0A0KEF2 Uncharacterized protein4.4e-3481.48Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQK-QQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILEL
        MSRSMLLVFLFVILIITSQFEWRQQLVPEV++  NSQK QQQIS REEAVKE+I+LSQERNIQRLNEVVRSLR++LQQC+G  +NITNGT L+S+HILEL
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQK-QQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILEL

Query:  QRLRVLDD
        +RL VL+D
Subjt:  QRLRVLDD

A0A5A7V382 NAC domain-containing protein 404.4e-3481.48Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQK-QQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILEL
        MSRSMLLVFLFVILIITSQFEWRQQLVPEV+T  NSQK QQQIS REEAVKE+I+LSQERNIQRLNEVVRSLR++LQQC+G  +NITNGT L++ HILEL
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQK-QQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILEL

Query:  QRLRVLDD
        +RL VL+D
Subjt:  QRLRVLDD

A0A6J1DHW9 uncharacterized protein LOC1110206478.1e-44100Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ
        MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ

Query:  RLRV
        RLRV
Subjt:  RLRV

A0A6J1FY60 uncharacterized protein LOC1114489801.1e-3583.18Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ
        MSRSMLLVFLFVILIITSQFEW+QQLVPEV+T  NSQKQQQIS REEAVKE+I+LSQERNIQRLNEVVRSLRE+LQQC+G  +NITNGT L+S HILEL+
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ

Query:  RLRVLDD
        RL VL+D
Subjt:  RLRVLDD

A0A6J1J9H8 uncharacterized protein LOC1114838101.1e-3583.18Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ
        MSRSMLLVFLFVILIITSQFEW+QQLVPEV+T  NSQKQQQIS REEAVKE+I+LSQERNIQRLNEVVRSLRE+LQQC+G  +NITNGT L+S HILEL+
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQ

Query:  RLRVLDD
        RL VL+D
Subjt:  RLRVLDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G44280.1 unknown protein2.5e-2159.63Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETA-ENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTL--MSSHIL
        MS+ +LLV L VILI+TSQFEWRQ LV E++TA  +SQKQQQIS REEAVKE+II+SQER+IQRLNE+VRSL+ +L QCKG N+   N T    ++   +
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETA-ENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTL--MSSHIL

Query:  ELQRLRVLD
        E++R ++L+
Subjt:  ELQRLRVLD

AT5G06265.1 hyaluronan mediated motility receptor-related1.2e-1042.05Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAE-----NSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNK
        M+RS +L+F+ + +++TSQFEW +Q+  E ET+      + ++QQ I + +E+V+ + IL QE+ IQ+LNE+VR LR +L QC+  N+
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAE-----NSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNK

AT5G06265.2 hyaluronan mediated motility receptor-related1.2e-1042.05Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAE-----NSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNK
        M+RS +L+F+ + +++TSQFEW +Q+  E ET+      + ++QQ I + +E+V+ + IL QE+ IQ+LNE+VR LR +L QC+  N+
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAE-----NSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNK

AT5G22280.1 unknown protein1.7e-2257.8Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSN--KNITNGTTLMSSHILE
        MSR ++LVFL VILI+TSQFEWRQ L+        SQK QQI+KREEAVKE+IILSQER+IQRLN++VRSL+ +LQ+CKG N  +N T  T+  +   +E
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSN--KNITNGTTLMSSHILE

Query:  LQRLRVLDD
        L+R  +++D
Subjt:  LQRLRVLDD

AT5G22280.2 unknown protein2.4e-1651.52Show/hide
Query:  FVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSN--KNITNGTTLMSSHILELQRLRVLDD
        F   +I   FEWRQ L+        SQK QQI+KREEAVKE+IILSQER+IQRLN++VRSL+ +LQ+CKG N  +N T  T+  +   +EL+R  +++D
Subjt:  FVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSN--KNITNGTTLMSSHILELQRLRVLDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGATGTCCAGATCCATGTTGCTTGTCTTTTTGTTCGTTATTCTAATTATCACTTCTCAGTTCGAGTGGAGGCAACAACTGGTACCTGAGGTTGAGACTGCGGAGAACTC
CCAGAAGCAGCAACAAATATCAAAGAGGGAAGAAGCAGTGAAGGAGCAGATCATATTGTCACAAGAAAGGAACATCCAGAGGCTGAATGAAGTTGTGCGAAGCCTCCGGG
AGGAGTTACAGCAGTGCAAAGGCAGTAACAAAAACATTACAAATGGGACAACTCTGATGAGTTCACATATTCTTGAGCTCCAACGCCTTCGTGTATTAGACGAC
mRNA sequenceShow/hide mRNA sequence
AAGATGTCCAGATCCATGTTGCTTGTCTTTTTGTTCGTTATTCTAATTATCACTTCTCAGTTCGAGTGGAGGCAACAACTGGTACCTGAGGTTGAGACTGCGGAGAACTC
CCAGAAGCAGCAACAAATATCAAAGAGGGAAGAAGCAGTGAAGGAGCAGATCATATTGTCACAAGAAAGGAACATCCAGAGGCTGAATGAAGTTGTGCGAAGCCTCCGGG
AGGAGTTACAGCAGTGCAAAGGCAGTAACAAAAACATTACAAATGGGACAACTCTGATGAGTTCACATATTCTTGAGCTCCAACGCCTTCGTGTATTAGACGAC
Protein sequenceShow/hide protein sequence
KMSRSMLLVFLFVILIITSQFEWRQQLVPEVETAENSQKQQQISKREEAVKEQIILSQERNIQRLNEVVRSLREELQQCKGSNKNITNGTTLMSSHILELQRLRVLDD