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MS005184 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005184
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein GL2-INTERACTING REPRESSOR 1
Genome locationscaffold176:3346051..3346404
RNA-Seq ExpressionMS005184
SyntenyMS005184
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061725.1 hypothetical protein E6C27_scaffold212G001000 [Cucumis melo var. makuwa]2.6e-2160.5Show/hide
Query:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEG-DQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQC
        MSKRSRS EAEV     L +NLN+SP  SS      SS+ V       S S  S +SCEG DQ   R     E ITRSM LVGCPGCFMYVMLT+KSSQC
Subjt:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEG-DQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQC

Query:  PKCKNNVFLDFFKHHRQHN
        PKCKNNVFLDFFK   QH+
Subjt:  PKCKNNVFLDFFKHHRQHN

KAG6570472.1 NAC domain-containing protein 40, partial [Cucurbita argyrosperma subsp. sororia]9.1e-1957.76Show/hide
Query:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP
        MSKRSRS E +V     L +NLNR P          S A   LS S SSS  S + SC G +  V    + E ITRSM LVGCPGCFMYVMLT+KSSQCP
Subjt:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP

Query:  KCKNNVFLDFFKHHRQ
        KC NNVFLDFFKH +Q
Subjt:  KCKNNVFLDFFKHHRQ

KAG7010337.1 hypothetical protein SDJN02_27130, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-1957.76Show/hide
Query:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP
        MSKRSRS E +V     L +NLNR P          S A   LS S SSS  S + SC G +  V    + E ITRSM LVGCPGCFMYVMLT+KSSQCP
Subjt:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP

Query:  KCKNNVFLDFFKHHRQ
        KC NNVFLDFFKH +Q
Subjt:  KCKNNVFLDFFKHHRQ

KAG7035922.1 hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-1752.99Show/hide
Query:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP
        MSKR RS E EV    +L +++NRSP  SS        +  GL S +S  SS   +  +G+ E+     D   +TRSM LVGCPGCFMYVMLTDKSSQCP
Subjt:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP

Query:  KCKNNVFLDFFKHHRQH
        KCKNNVFLDFF   + H
Subjt:  KCKNNVFLDFFKHHRQH

KGN48041.1 hypothetical protein Csa_002820 [Cucumis sativus]5.7e-2158.97Show/hide
Query:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP
        MSKRSRS EAEV     L +NLNRSP  +S+   S+S+     S S   S  +S +SCEG++   R     E ITRSM LVGCPGCFMYVMLT+KSSQCP
Subjt:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP

Query:  KCKNNVFLDFFKHHRQH
        KCKNNVFLDFFK    H
Subjt:  KCKNNVFLDFFKHHRQH

TrEMBL top hitse value%identityAlignment
A0A0A0KJX5 Uncharacterized protein2.8e-2158.97Show/hide
Query:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP
        MSKRSRS EAEV     L +NLNRSP  +S+   S+S+     S S   S  +S +SCEG++   R     E ITRSM LVGCPGCFMYVMLT+KSSQCP
Subjt:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP

Query:  KCKNNVFLDFFKHHRQH
        KCKNNVFLDFFK    H
Subjt:  KCKNNVFLDFFKHHRQH

A0A0K9QVF9 Uncharacterized protein6.4e-1039.34Show/hide
Query:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSS----SLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKS
        MS+R+ +     G N  L+L LN SP         +   V+G  +    S SSS  S   SC   +E ++Y S  E  T SM LVGCP C MYVML++  
Subjt:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSS----SLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKS

Query:  SQCPKCKNNVFLDFFKHHRQHN
         +CPKCK+ V LDF +++  +N
Subjt:  SQCPKCKNNVFLDFFKHHRQHN

A0A5D3BBS4 Uncharacterized protein1.2e-2160.5Show/hide
Query:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEG-DQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQC
        MSKRSRS EAEV     L +NLN+SP  SS      SS+ V       S S  S +SCEG DQ   R     E ITRSM LVGCPGCFMYVMLT+KSSQC
Subjt:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEG-DQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQC

Query:  PKCKNNVFLDFFKHHRQHN
        PKCKNNVFLDFFK   QH+
Subjt:  PKCKNNVFLDFFKHHRQHN

A0A660KQ11 Uncharacterized protein1.4e-0942.74Show/hide
Query:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGD------QEQVRYCSDNETITRSMALVGCPGCFMYVMLTD
        MS+R  SP+        L L LN SP   +T  +   +      S+ SSSSSSSDMS EG        E   Y   N    +SM LVGCP C MYVML+D
Subjt:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGD------QEQVRYCSDNETITRSMALVGCPGCFMYVMLTD

Query:  KSSQCPKCKNNVFLDFFKHHRQHN
         + +CPKCK+ V LDF K     N
Subjt:  KSSQCPKCKNNVFLDFFKHHRQHN

S8CR85 Uncharacterized protein2.4e-0944.04Show/hide
Query:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP
        MS+R+  P+ E+ +NLS    + R  A    EEE    +  G   ++S SS+ S  SC   +E  RY S  ET T SM LVGCP C MYVML+++  +CP
Subjt:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP

Query:  KCKNNVFLD
        KCK+ V LD
Subjt:  KCKNNVFLD

SwissProt top hitse value%identityAlignment
Q9FMS4 Protein salt-induced and EIN3/EIL1-dependent 17.8e-0534.65Show/hide
Query:  EVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLT-DKSSQCPKCKNNVFLD
        E   NL L+L LN SP+               L SSL + SSSS + C  + E            +SM +VGCP C MY++ + +   +CP+C ++V LD
Subjt:  EVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLT-DKSSQCPKCKNNVFLD

Query:  F
        F
Subjt:  F

Q9FNI1 Protein GL2-INTERACTING REPRESSOR 11.4e-0944.09Show/hide
Query:  LNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCPKCKNNVFLDF
        L L LN SP  SS      S +    +S  S  SS        D+  VRY +  E  T SM LVGCP C MYVML++   +CPKCK+ V LDF
Subjt:  LNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCPKCKNNVFLDF

Q9SRN4 Protein GL2-INTERACTING REPRESSOR 26.1e-1041.23Show/hide
Query:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP
        MS+R+++     G  L L LNL+  P+ +S        ++V   +  +++S SS +S E +QE      +NETIT SM LVGCP C MYVML+D   +CP
Subjt:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP

Query:  KCKNNVFLDFFKHH
        KCK+ V LDF + +
Subjt:  KCKNNVFLDFFKHH

Arabidopsis top hitse value%identityAlignment
AT3G11600.1 unknown protein4.4e-1141.23Show/hide
Query:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP
        MS+R+++     G  L L LNL+  P+ +S        ++V   +  +++S SS +S E +QE      +NETIT SM LVGCP C MYVML+D   +CP
Subjt:  MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCP

Query:  KCKNNVFLDFFKHH
        KCK+ V LDF + +
Subjt:  KCKNNVFLDFFKHH

AT3G52561.1 unknown protein6.8e-0440.32Show/hide
Query:  SLSSSSSSSDMSC----EGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCPKCK
        S SS +SSS  SC    E  +E+V     +E     M ++GC  C MYVM+  +  +CPKCK
Subjt:  SLSSSSSSSDMSC----EGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCPKCK

AT5G06270.1 unknown protein9.7e-1144.09Show/hide
Query:  LNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCPKCKNNVFLDF
        L L LN SP  SS      S +    +S  S  SS        D+  VRY +  E  T SM LVGCP C MYVML++   +CPKCK+ V LDF
Subjt:  LNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCPKCKNNVFLDF

AT5G22270.1 unknown protein5.5e-0634.65Show/hide
Query:  EVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLT-DKSSQCPKCKNNVFLD
        E   NL L+L LN SP+               L SSL + SSSS + C  + E            +SM +VGCP C MY++ + +   +CP+C ++V LD
Subjt:  EVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLT-DKSSQCPKCKNNVFLD

Query:  F
        F
Subjt:  F


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAGAGATCCAGAAGCCCAGAGGCAGAGGTGGGGATGAACCTGAGCTTGAACCTGAACCTGAACCGGTCTCCGGCGTGGTCGTCCACGGAGGAGGAGTCGCTGAG
CAGCGCCGTTGTGGGGCTGTCGTCGTCGTTGTCGTCTTCGTCCTCGTCGTCGGATATGTCGTGTGAGGGAGATCAGGAGCAGGTGAGATATTGTTCGGATAATGAGACGA
TAACGAGGTCGATGGCGCTGGTGGGTTGCCCCGGATGCTTCATGTATGTGATGTTGACGGACAAGAGCTCCCAATGCCCAAAATGCAAGAACAATGTGTTCCTTGATTTC
TTCAAGCACCACCGTCAACATAAT
mRNA sequenceShow/hide mRNA sequence
ATGAGCAAGAGATCCAGAAGCCCAGAGGCAGAGGTGGGGATGAACCTGAGCTTGAACCTGAACCTGAACCGGTCTCCGGCGTGGTCGTCCACGGAGGAGGAGTCGCTGAG
CAGCGCCGTTGTGGGGCTGTCGTCGTCGTTGTCGTCTTCGTCCTCGTCGTCGGATATGTCGTGTGAGGGAGATCAGGAGCAGGTGAGATATTGTTCGGATAATGAGACGA
TAACGAGGTCGATGGCGCTGGTGGGTTGCCCCGGATGCTTCATGTATGTGATGTTGACGGACAAGAGCTCCCAATGCCCAAAATGCAAGAACAATGTGTTCCTTGATTTC
TTCAAGCACCACCGTCAACATAAT
Protein sequenceShow/hide protein sequence
MSKRSRSPEAEVGMNLSLNLNLNRSPAWSSTEEESLSSAVVGLSSSLSSSSSSSDMSCEGDQEQVRYCSDNETITRSMALVGCPGCFMYVMLTDKSSQCPKCKNNVFLDF
FKHHRQHN