; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005186 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005186
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationscaffold176:3353007..3353837
RNA-Seq ExpressionMS005186
SyntenyMS005186
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035921.1 putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-12282.51Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF
        I +R+VWDFNL +EF LI +L  R+PF+SMDTEFPGVV+R  PA  PS  RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIW+FNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

XP_022957732.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]4.6e-12282.51Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF
        I +R+VWDFNL +EF LI +L  R+PF+SMDTEFPGVV+R  PA  PS  RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIW+FNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

XP_022995114.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]6.0e-12282.51Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF
        I +R+VWDFNL +EF LI  L  R+PF+SMDTEFPGVV+R  PA  PS  RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIW+FNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

XP_023534188.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo]4.6e-12282.51Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF
        I +R+VWDFNL +EF LI +L  R+PF+SMDTEFPGVV+R  PA  PS  RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIW+FNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

XP_038901771.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]2.9e-12484.03Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF
        IQIRQVWDFNL+YEF+LI  L HRFPF+SMDTEFPGVV+R  PA    R RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT N FIW+FNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSI+LLKRQGIDF+RN   GV S+RFA LLMSSGLLCNDSV+WVTFHSAYDFGYLVKILTR  LPARLHDFLKILR  FGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        FCD LYGGLDRVAKTL +DRAVGK HQAGSDSLLTW AFQKMRDVYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

TrEMBL top hitse value%identityAlignment
A0A2C9V215 Poly(A)-specific ribonuclease2.0e-11877.82Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPG--PAADPSR-RRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNF
        I IR+VW  NLE EF LI  L   FPF+SMDTEFPG+V RP   P    SR RRPSDHY++LKSNVD LNLIQVGLTLSD++GNLP LGT N FIW+FNF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPG--PAADPSR-RRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNF

Query:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH
        RDFD++RDAHAPDSIDLL+RQGIDF+RN  +GVDS  FA L+MSSGL+CNDSVSWVTFHSAYDFGYLVKILTRR LP  L +FL +LR+FFG +VYD+KH
Subjt:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH

Query:  MMRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        MMRFCDSLYGGLDRVA+TL+++RAVGKCHQAGSDSLLTWHAFQ+MRDVYFVKDGPEKHAGVLYGLE
Subjt:  MMRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

A0A5J5C461 Poly(A)-specific ribonuclease2.6e-11876.87Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSR-----RRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDF
        I IR+VW  NLE EF LI+ L  R+P++SMDTEFPGVV R  PA DP++     RRPSDHY++LKSNVD LNLIQ+GLTLSDA GNLP +GT + FIW+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSR-----RRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDF

Query:  NFRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDV
        NF DFD+ RD HAPDS++LLKRQGIDF RN  +GVDSARFA L+MSSGL+CNDSVSWVTFHSAYDFGYLVKILTRR LP  L DFL +LR+FFGN+VYDV
Subjt:  NFRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDV

Query:  KHMMRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        KH+M+FC+SLYGGLDRVA+TLE+DRAVGKCHQAGSDSLLTWHAFQKMRDVYFVK+GPEKHAGVLYGLE
Subjt:  KHMMRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

A0A6J1GZY2 Poly(A)-specific ribonuclease2.2e-12282.51Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF
        I +R+VWDFNL +EF LI +L  R+PF+SMDTEFPGVV+R  PA  PS  RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIW+FNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

A0A6J1K4S7 Poly(A)-specific ribonuclease2.9e-12282.51Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF
        I +R+VWDFNL +EF LI  L  R+PF+SMDTEFPGVV+R  PA  PS  RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIW+FNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

A0A6P3Z4L2 Poly(A)-specific ribonuclease2.7e-12078.11Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR--RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFR
        I IR+VW  NLE EF LI  L   FPF+SMDTEFPG+V RP P  DP+ R  RPSDHY LLKSNVD LNLIQVGLTLSD+ GNLP LG+ N FIW+FNF 
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR--RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFR

Query:  DFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHM
        DFD++RDAHAPDSIDLL+RQGIDF RN  +G+DS RFA L+MSSGL+CND+VSWVTFHSAYDFGYLVKILTRR+LP R+ +FL++LR+FFGN+VYD+KHM
Subjt:  DFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHM

Query:  MRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        MRFC SLYGGLDRVA+TLE+DRAVGKCHQAGSDSLLTWHAFQKMRDVYFV DGPEKHAGVLYGLE
Subjt:  MRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 111.6e-10469.66Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR-RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLG--TPNAFIWDFNF
        I IR VW +NLE EF LI  +   +PF+SMDTEFPGV+ +     D  RR  P+  Y LLKSNVD L+LIQVGLTLSDA GNLP LG      +IW+FNF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR-RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLG--TPNAFIWDFNF

Query:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH
        RDFD+ RD HAPDSI+LL+R GIDF+RN ++GV+S RFA L+MSSGL+CN+SVSWVTFHSAYDFGYLVKILTRR LP  L +FL +LR FFG++VYDVKH
Subjt:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH

Query:  MMRFCDS-LYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        +MRFC+  LYGGLDRVA++LE++RAVGKCHQAGSDSLLTW AFQ+MRD+YFV+DG EKHAGVLYGLE
Subjt:  MMRFCDS-LYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

Q9LEU4 Probable CCR4-associated factor 1 homolog 107.3e-7853.44Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF
        I IR+VWD+NL  EF+LI ++  +F +++MDTEFPGVVL+P       +     +YR LK NVD+L LIQVGLT SD +GNLPT GT    IW FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        ++  D +A +SI+LL++ GIDF++N + G+D  RF  L+MSSG++ ND++SWVTFH  YDFGYLVK+LT + LP +  DF K+L ++F   VYD+KH+M 
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGL
        FC+ L+GGL+R+A+ + ++R VG CHQAGSDSLLT  +F+K+++ YF     EK+ GVLYGL
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGL

Q9LXM2 Probable CCR4-associated factor 1 homolog 94.4e-10768.28Show/hide
Query:  IQIQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTP--NAFIWDFN
        + +  R+VW  NLE EF LI+++   +PF+SMDTEFPGV+ +    +D     P D Y LLK+NVD L+LIQVGLTLSD +GNLP LG      FIW+FN
Subjt:  IQIQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTP--NAFIWDFN

Query:  FRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVK
        FRDFD+ARDAHAPDSI+LL+RQGIDF+RN +DGV+S RFA L+MSSGL+CN+ VSWVTFHSAYDFGYL+KILTRR LP  L +F +++R+ FG +VYDVK
Subjt:  FRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVK

Query:  HMMRFCD-SLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        HMM+FC+  L+GGLDRVA+TLE++RAVGKCHQAGSDSLLTWHAFQ+MRD+YFV+DGPEKHAGVLYGLE
Subjt:  HMMRFCD-SLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

Q9SAI2 Probable CCR4-associated factor 1 homolog 63.3e-7855.13Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF
        IQIR+VW+ NL+ E  LI  +   FP+V+MDTEFPG+V+RP       +     HY  LK+NV++L +IQ+GLT S+  GNLPT GT    IW FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        DL  D  A DSI+LLK+ GID  +N  DG+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP    DF K++ ++F   VYD+KH+M+
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGL
        FC+SL+GGL+++A+ LE++R VG CHQAGSDSLLT   F+K+++ +FV  GP  K++GVLYGL
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGL

Q9SKZ2 Probable CCR4-associated factor 1 homolog 75.6e-7854.37Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAF-IWDFNFRD
        IQIR+VW+ NLE E +LI ++   FPFV+MDTEFPG+V RP       +     HY  LK+NV++L +IQ+GLT SD  GNLPT GT N + IW FNFR+
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAF-IWDFNFRD

Query:  FDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMM
        FDL  D +A DSI+LL++ GIDF +N + G+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP     F +++ ++F  +VYD+KH+M
Subjt:  FDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMM

Query:  RFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGL
        +FC+SL+GGL+++A+ L+++R VG CHQAGSDSLLT   F+K+++ +F+    EK++GVLYGL
Subjt:  RFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGL

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-7955.13Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF
        IQIR+VW+ NL+ E  LI  +   FP+V+MDTEFPG+V+RP       +     HY  LK+NV++L +IQ+GLT S+  GNLPT GT    IW FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        DL  D  A DSI+LLK+ GID  +N  DG+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP    DF K++ ++F   VYD+KH+M+
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGL
        FC+SL+GGL+++A+ LE++R VG CHQAGSDSLLT   F+K+++ +FV  GP  K++GVLYGL
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-7955.13Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF
        IQIR+VW+ NL+ E  LI  +   FP+V+MDTEFPG+V+RP       +     HY  LK+NV++L +IQ+GLT S+  GNLPT GT    IW FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        DL  D  A DSI+LLK+ GID  +N  DG+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP    DF K++ ++F   VYD+KH+M+
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGL
        FC+SL+GGL+++A+ LE++R VG CHQAGSDSLLT   F+K+++ +FV  GP  K++GVLYGL
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-7955.13Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF
        IQIR+VW+ NL+ E  LI  +   FP+V+MDTEFPG+V+RP       +     HY  LK+NV++L +IQ+GLT S+  GNLPT GT    IW FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        DL  D  A DSI+LLK+ GID  +N  DG+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP    DF K++ ++F   VYD+KH+M+
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGL
        FC+SL+GGL+++A+ LE++R VG CHQAGSDSLLT   F+K+++ +FV  GP  K++GVLYGL
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGL

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.1e-10868.28Show/hide
Query:  IQIQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTP--NAFIWDFN
        + +  R+VW  NLE EF LI+++   +PF+SMDTEFPGV+ +    +D     P D Y LLK+NVD L+LIQVGLTLSD +GNLP LG      FIW+FN
Subjt:  IQIQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTP--NAFIWDFN

Query:  FRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVK
        FRDFD+ARDAHAPDSI+LL+RQGIDF+RN +DGV+S RFA L+MSSGL+CN+ VSWVTFHSAYDFGYL+KILTRR LP  L +F +++R+ FG +VYDVK
Subjt:  FRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVK

Query:  HMMRFCD-SLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        HMM+FC+  L+GGLDRVA+TLE++RAVGKCHQAGSDSLLTWHAFQ+MRD+YFV+DGPEKHAGVLYGLE
Subjt:  HMMRFCD-SLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-10569.66Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR-RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLG--TPNAFIWDFNF
        I IR VW +NLE EF LI  +   +PF+SMDTEFPGV+ +     D  RR  P+  Y LLKSNVD L+LIQVGLTLSDA GNLP LG      +IW+FNF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR-RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLG--TPNAFIWDFNF

Query:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH
        RDFD+ RD HAPDSI+LL+R GIDF+RN ++GV+S RFA L+MSSGL+CN+SVSWVTFHSAYDFGYLVKILTRR LP  L +FL +LR FFG++VYDVKH
Subjt:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH

Query:  MMRFCDS-LYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE
        +MRFC+  LYGGLDRVA++LE++RAVGKCHQAGSDSLLTW AFQ+MRD+YFV+DG EKHAGVLYGLE
Subjt:  MMRFCDS-LYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAATCTTAAGCTTCACTTCAACCATGGTGATCCAAATCCAGATCCGTCAGGTTTGGGATTTCAATCTGGAATACGAATTCAGCCTCATCGCTCAACTCAACCATCGATT
CCCTTTCGTTTCCATGGATACGGAGTTTCCCGGCGTCGTCCTCCGCCCTGGCCCTGCCGCCGATCCATCTCGCCGACGCCCCTCCGACCACTACCGTCTCCTCAAGTCAA
ACGTCGACGTTTTGAACCTTATCCAGGTCGGCCTCACCCTCTCCGACGCCCACGGCAACCTCCCCACTCTCGGTACCCCCAACGCCTTCATTTGGGACTTCAACTTCAGG
GATTTCGACTTGGCGCGTGACGCCCACGCTCCCGATTCCATCGACCTCTTGAAACGCCAGGGGATCGACTTCCAACGGAACGCCAAGGACGGCGTCGACTCGGCCCGGTT
CGCCCACTTGCTCATGTCATCCGGTCTTCTCTGTAACGACTCCGTCAGCTGGGTCACGTTTCACAGCGCCTACGATTTCGGGTATCTGGTCAAGATCCTCACCCGCCGGA
ACTTGCCGGCTCGCCTCCACGACTTCTTGAAAATTCTCAGGCTCTTTTTCGGAAACAAAGTTTACGACGTCAAGCACATGATGCGGTTCTGTGATTCCCTCTACGGCGGC
TTGGACCGGGTCGCCAAGACCCTTGAGCTGGACCGCGCGGTTGGGAAGTGCCACCAGGCCGGTTCTGATAGCCTGCTGACCTGGCATGCCTTTCAGAAAATGAGGGATGT
GTATTTTGTAAAGGATGGGCCGGAGAAGCACGCCGGCGTCTTGTATGGATTAGAGCCACTG
mRNA sequenceShow/hide mRNA sequence
GCAATCTTAAGCTTCACTTCAACCATGGTGATCCAAATCCAGATCCGTCAGGTTTGGGATTTCAATCTGGAATACGAATTCAGCCTCATCGCTCAACTCAACCATCGATT
CCCTTTCGTTTCCATGGATACGGAGTTTCCCGGCGTCGTCCTCCGCCCTGGCCCTGCCGCCGATCCATCTCGCCGACGCCCCTCCGACCACTACCGTCTCCTCAAGTCAA
ACGTCGACGTTTTGAACCTTATCCAGGTCGGCCTCACCCTCTCCGACGCCCACGGCAACCTCCCCACTCTCGGTACCCCCAACGCCTTCATTTGGGACTTCAACTTCAGG
GATTTCGACTTGGCGCGTGACGCCCACGCTCCCGATTCCATCGACCTCTTGAAACGCCAGGGGATCGACTTCCAACGGAACGCCAAGGACGGCGTCGACTCGGCCCGGTT
CGCCCACTTGCTCATGTCATCCGGTCTTCTCTGTAACGACTCCGTCAGCTGGGTCACGTTTCACAGCGCCTACGATTTCGGGTATCTGGTCAAGATCCTCACCCGCCGGA
ACTTGCCGGCTCGCCTCCACGACTTCTTGAAAATTCTCAGGCTCTTTTTCGGAAACAAAGTTTACGACGTCAAGCACATGATGCGGTTCTGTGATTCCCTCTACGGCGGC
TTGGACCGGGTCGCCAAGACCCTTGAGCTGGACCGCGCGGTTGGGAAGTGCCACCAGGCCGGTTCTGATAGCCTGCTGACCTGGCATGCCTTTCAGAAAATGAGGGATGT
GTATTTTGTAAAGGATGGGCCGGAGAAGCACGCCGGCGTCTTGTATGGATTAGAGCCACTG
Protein sequenceShow/hide protein sequence
AILSFTSTMVIQIQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWDFNFR
DFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMRFCDSLYGG
LDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEPL