CuGenDBv2

Gene ID	MS005187
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DUF1279 domain-containing protein
Genome location	scaffold176:3355699..3356920
RNA-Seq Expression	MS005187
Synteny	MS005187
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009688 - Protein FAM210A/B-like domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6570471.1 Family With Sequence Similarity 210 Member B, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-69

78.17

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Query:  SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSP---------DEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSK
        S ICFSS FISSPASF D NFRF   S  R PKFN +  R RV+ALKEKTGEIERPSP         DEVTKKYGLEAGLWKIFSSKEEGE   GK KSK
Subjt:  SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSP---------DEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSK

Query:  GEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQ
        G+QAKELLAKYGGAYLATSITLSLISF+ CYALISAG+DVQALLQKVGIS +  GEKVGTFALAYAAHKA SPIRFPPTVALT +VA+WIGKKVE++
Subjt:  GEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQ

XP_022152952.1 uncharacterized protein LOC111020570 isoform X1 [Momordica charantia]

1.6e-97

100

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Query:  MASLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKEL
        MASLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKEL
Subjt:  MASLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKEL

Query:  LAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE
        LAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE
Subjt:  LAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE

XP_022152953.1 uncharacterized protein LOC111020570 isoform X2 [Momordica charantia]

2.0e-84

100

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Query:  RFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKELLAKYGGAYLATSITLSLISFSLC
        RFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKELLAKYGGAYLATSITLSLISFSLC
Subjt:  RFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKELLAKYGGAYLATSITLSLISFSLC

Query:  YALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE
        YALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE
Subjt:  YALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE

XP_022943302.1 uncharacterized protein LOC111448115 [Cucurbita moschata]

6.3e-70

78.17

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Query:  SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSP---------DEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSK
        S ICFSS FISSPASF D NFRF   S  R PKFN +  R RV+ALKEKTGEIERPSP         DEVTKKYGLEAGLWKIFSSKEEGE   GK KSK
Subjt:  SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSP---------DEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSK

Query:  GEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQ
        G+QAKELLAKYGGAYLATSITLSLISF++CYALISAG+DVQALLQKVGIS +  GEKVGTFALAYAAHKA SPIRFPPTVALT +VA+WIGKKVE++
Subjt:  GEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQ

XP_038901803.1 uncharacterized protein LOC120088508 [Benincasa hispida]

2.8e-70

79.4

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Query:  SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERP-----------SPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGK
        SLI FS    SS  SFAD NFRF    PN   KFNS+  RFRV+ALK+KTGEIERP           S DEVTKKYGLEAGLWKIFSSKEE E   GK K
Subjt:  SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERP-----------SPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGK

Query:  SKGEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQ
        SKG+QAKELLAKYGGAYLATSITLSLISFSLCYALISAG+DVQALLQKVGISA+ETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEK+
Subjt:  SKGEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KEW3 DUF1279 domain-containing protein

2.0e-69

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Query:  ASLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSP------DEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGE
        +SLI FSS   SS  SF   NFRFH   PN   KFNS+   FRV+ALK+KTGEIERPSP      DEVTKKYGLEAGLWKIFSSKEEGE   G  KSKG+
Subjt:  ASLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSP------DEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGE

Query:  QAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQ
        QAKELLAKYGGAYLATSITLSLISFSLCYALISAG+DVQ LLQKVGIS +ETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEK+
Subjt:  QAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQ

A0A6J1DG88 uncharacterized protein LOC111020570 isoform X2

9.8e-85

100

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Query:  RFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKELLAKYGGAYLATSITLSLISFSLC
        RFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKELLAKYGGAYLATSITLSLISFSLC
Subjt:  RFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKELLAKYGGAYLATSITLSLISFSLC

Query:  YALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE
        YALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE
Subjt:  YALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE

A0A6J1DHN1 uncharacterized protein LOC111020570 isoform X1

7.7e-98

100

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Query:  MASLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKEL
        MASLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKEL
Subjt:  MASLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKEL

Query:  LAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE
        LAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE
Subjt:  LAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE

A0A6J1FSN5 uncharacterized protein LOC111448115

3.1e-70

78.17

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Query:  SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSP---------DEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSK
        S ICFSS FISSPASF D NFRF   S  R PKFN +  R RV+ALKEKTGEIERPSP         DEVTKKYGLEAGLWKIFSSKEEGE   GK KSK
Subjt:  SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSP---------DEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSK

Query:  GEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQ
        G+QAKELLAKYGGAYLATSITLSLISF++CYALISAG+DVQALLQKVGIS +  GEKVGTFALAYAAHKA SPIRFPPTVALT +VA+WIGKKVE++
Subjt:  GEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQ

A0A6J1JG12 uncharacterized protein LOC111484182

3.1e-70

78.17

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Query:  SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSP---------DEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSK
        S ICFSS FISSPASF D NFRF   S  R PKFN +  R RV+ALKEKTGEIERPSP         DEVTKKYGLEAGLWKIFSSKEEGE   GK KSK
Subjt:  SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSP---------DEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSK

Query:  GEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQ
        G+QAKELLAKYGGAYLATSITLSLISF++CYALISAG+DVQALLQKVGIS +  GEKVGTFALAYAAHKA SPIRFPPTVALT +VA+WIGKKVE++
Subjt:  GEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQ

SwissProt top hits

e value

%identity

Alignment

Q96KR6 Protein FAM210B, mitochondrial

4.2e-08

32.67

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Query:  KGKSKGEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKV----GTFALAYAAHKAASPIRFPPTVALTPIVASWIG
        K +SK +Q K++  +YG   ++  I +SLIS  + Y ++S+G+D+ A+L K+G   +    K+     TF +AYA HK  +P+R   T+   P++  +  
Subjt:  KGKSKGEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKV----GTFALAYAAHKAASPIRFPPTVALTPIVASWIG

Query:  K
        K
Subjt:  K

Q9D8B6 Protein FAM210B, mitochondrial

4.6e-07

32.65

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Query:  KGKSKGEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKV----GTFALAYAAHKAASPIRFPPTVALTPIVASW
        K  S+ +Q K++  +YG   ++  I +SL+S  + Y ++S+GID+ A+L K+G   +    K+     TF +AYA HK  +P+R   T+   P V  +
Subjt:  KGKSKGEQAKELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKV----GTFALAYAAHKAASPIRFPPTVALTPIVASW

Arabidopsis top hits

e value

%identity

Alignment

AT2G20940.1 Protein of unknown function (DUF1279)

2.9e-04

30.77

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Query:  KELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGI------------------------SANETGEKV----GTFALAYAAHKAASPIRF
        KE++ KYG   L    ++S +S S  Y  I   +DV++LL+K  I                        S N+T +      G  ALA   +KA  PIR 
Subjt:  KELLAKYGGAYLATSITLSLISFSLCYALISAGIDVQALLQKVGI------------------------SANETGEKV----GTFALAYAAHKAASPIRF

Query:  PPTVALTPIVASWIGKK
        P T+ALTP +A ++ ++
Subjt:  PPTVALTPIVASWIGKK

AT2G27290.1 Protein of unknown function (DUF1279)

1.6e-55

69.94

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Query:  RFRVKALKEKTGEIER-----------PSPDEVTKKYGLEAGLWKIFSSKEE--GEGDVGKGKSKGEQAKELLAKYGGAYLATSITLSLISFSLCYALIS
        +FR +A++EK  +I++           PS +EVTKKYGLE GLWKI SSK++   +GD  K KSK ++AKELLAKYGGAYLATSITLSLISFSLCY L++
Subjt:  RFRVKALKEKTGEIER-----------PSPDEVTKKYGLEAGLWKIFSSKEE--GEGDVGKGKSKGEQAKELLAKYGGAYLATSITLSLISFSLCYALIS

Query:  AGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE
        +G+DVQALL KVGIS NETGEKVG FALAYAAHKAASPIRFPPTVALTPIVA+WIGKKV+K++
Subjt:  AGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE

Sequences

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CDS sequence

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ATGGCCTCTCTAATTTGCTTTTCGTCTTGTTTCATTTCCTCTCCTGCTTCCTTTGCTGATGGAAATTTCAGATTTCACTTGAAATCTCCCAATCGATCTCCAAAATTCAA
TTCGGAACGATTCAGATTTAGGGTGAAAGCCCTTAAAGAGAAAACGGGCGAAATCGAACGCCCATCTCCAGATGAAGTTACCAAGAAGTACGGACTCGAAGCTGGTCTCT
GGAAGATATTTAGCTCAAAGGAGGAGGGAGAGGGCGATGTTGGGAAAGGCAAATCAAAGGGTGAGCAGGCAAAAGAGCTGCTTGCAAAATATGGAGGTGCATATTTAGCC
ACCTCCATAACTCTCTCCCTCATCTCCTTCTCTCTGTGCTATGCACTCATCAGTGCCGGTATCGATGTTCAAGCTCTTCTGCAGAAGGTAGGAATTTCGGCTAATGAGAC
TGGAGAGAAAGTTGGGACGTTTGCTTTGGCATACGCAGCGCATAAAGCAGCTTCTCCAATAAGGTTTCCTCCAACAGTAGCCCTCACTCCAATTGTTGCAAGTTGGATAG
GGAAAAAGGTTGAGAAACAGGAA

mRNA sequence

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Protein sequence

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MASLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKELLAKYGGAYLA
TSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKQE

MS005187 (gene) of Bitter gourd (TR) v1 genome