CuGenDBv2

Gene ID	MS005229
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	basic-leucine zipper transcription factor A
Genome location	scaffold83:153057..153530
RNA-Seq Expression	MS005229
Synteny	MS005229
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0063552.1 uncharacterized protein E6C27_scaffold329G00590 [Cucumis melo var. makuwa]

6.8e-62

81.82

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Query:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNG------HHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRSSP--ENKDRRPHFISRLGRHG
        MDDSNEHKGNSS S+LKEMLKSSLCLSCCLRKHRNG      HHHHHHH HHRRMSISSDGD P PL RCSSAKDKSRS    + KDR P+FISRLGRHG
Subjt:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNG------HHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRSSP--ENKDRRPHFISRLGRHG

Query:  RRHSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY
        RRHSASADF YDA SYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPK+ PSSS+  SRE+ TA+
Subjt:  RRHSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY

XP_008460859.1 PREDICTED: uncharacterized protein LOC103499607 [Cucumis melo]

6.8e-62

81.82

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Query:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNG------HHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRSSP--ENKDRRPHFISRLGRHG
        MDDSNEHKGNSS S+LKEMLKSSLCLSCCLRKHRNG      HHHHHHH HHRRMSISSDGD P PL RCSSAKDKSRS    + KDR P+FISRLGRHG
Subjt:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNG------HHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRSSP--ENKDRRPHFISRLGRHG

Query:  RRHSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY
        RRHSASADF YDA SYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPK+ PSSS+  SRE+ TA+
Subjt:  RRHSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY

XP_011650096.1 NEDD8-specific protease 1 [Cucumis sativus]

6.8e-62

83.44

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Query:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHH--HHHHHHHHRR-MSISSDGD-MPKPLMRCSSAKDKSRSSP--ENKDRRPHFISRLGRHGRR
        MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHH  HHHHHHHHRR MSISSDG+  P PLMRCSSAKDKSRS    + KDR P FISRLGRHGRR
Subjt:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHH--HHHHHHHHRR-MSISSDGD-MPKPLMRCSSAKDKSRSSP--ENKDRRPHFISRLGRHGRR

Query:  HSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY
        HSASADFHYDA SYSLNFDEGYDEGHVDD+FPLRNFSSRLPASPPK+ PS+++  SRE+ TA+
Subjt:  HSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY

XP_023536962.1 uncharacterized protein LOC111798189 [Cucurbita pepo subsp. pepo]

1.2e-58

80.75

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Query:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRS--SPENK-DRRPHFISRLGRHGRRH-S
        MDDSNEHK N+SPSSLK  +KSSLCLSCCLR+HRNGHHH   H H RRMS SSDGD+P PL RCSSAKDKSRS  SPE+K D RPHFISRLGRH RRH S
Subjt:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRS--SPENK-DRRPHFISRLGRHGRRH-S

Query:  ASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY
        AS DFHYDA SY+LNFDEGYDEGHVDD FPLRNFSSRLPASPPK+ P SSS TSRE+TTAY
Subjt:  ASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY

XP_038890730.1 homeobox protein MOX-2 [Benincasa hispida]

6.4e-68

88.75

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Query:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNG-HHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRS--SPENKDRRPHFISRLGRHGRRHSA
        MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNG HHHHHHHHHHRRMSISSDGD P PLMRCSSAKDKSRS  SPE KDRRPHFISRLGRHGRRHSA
Subjt:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNG-HHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRS--SPENKDRRPHFISRLGRHGRRHSA

Query:  SADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY
        SADF YDA SY+LNFDEGYDEGHVDD+FPLRNFSSRLPASP K+ P SSSN SRE+ TA+
Subjt:  SADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LL60 Uncharacterized protein

3.3e-62

83.44

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Query:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHH--HHHHHHHHRR-MSISSDGD-MPKPLMRCSSAKDKSRSSP--ENKDRRPHFISRLGRHGRR
        MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHH  HHHHHHHHRR MSISSDG+  P PLMRCSSAKDKSRS    + KDR P FISRLGRHGRR
Subjt:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHH--HHHHHHHHRR-MSISSDGD-MPKPLMRCSSAKDKSRSSP--ENKDRRPHFISRLGRHGRR

Query:  HSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY
        HSASADFHYDA SYSLNFDEGYDEGHVDD+FPLRNFSSRLPASPPK+ PS+++  SRE+ TA+
Subjt:  HSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY

A0A1S3CDF1 uncharacterized protein LOC103499607

3.3e-62

81.82

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Query:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNG------HHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRSSP--ENKDRRPHFISRLGRHG
        MDDSNEHKGNSS S+LKEMLKSSLCLSCCLRKHRNG      HHHHHHH HHRRMSISSDGD P PL RCSSAKDKSRS    + KDR P+FISRLGRHG
Subjt:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNG------HHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRSSP--ENKDRRPHFISRLGRHG

Query:  RRHSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY
        RRHSASADF YDA SYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPK+ PSSS+  SRE+ TA+
Subjt:  RRHSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY

A0A5D3BFQ4 Uncharacterized protein

3.3e-62

81.82

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Query:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNG------HHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRSSP--ENKDRRPHFISRLGRHG
        MDDSNEHKGNSS S+LKEMLKSSLCLSCCLRKHRNG      HHHHHHH HHRRMSISSDGD P PL RCSSAKDKSRS    + KDR P+FISRLGRHG
Subjt:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNG------HHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRSSP--ENKDRRPHFISRLGRHG

Query:  RRHSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY
        RRHSASADF YDA SYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPK+ PSSS+  SRE+ TA+
Subjt:  RRHSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY

A0A6J1FDP2 uncharacterized protein LOC111444439

1.3e-58

80.12

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Query:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRS--SPENK-DRRPHFISRLGRHGRRH-S
        MDDSNEHK N+SPSSLK  +KSSLCLSCCLR+HRNGHHH   H H RRMS SSDGD+P PL RCSSAKDKSRS  SPE+K D RPHFISRLGRH RRH S
Subjt:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRS--SPENK-DRRPHFISRLGRHGRRH-S

Query:  ASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY
        AS DFHYDA SY+LNFDEGYDEGHVDD FPLRNFSSRLPASPPK+ P SS+ TSRE+TTAY
Subjt:  ASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY

A0A6J1HQB7 uncharacterized protein LOC111465710

4.9e-58

80.12

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Query:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRS--SPENK-DRRPHFISRLGRHGRRH-S
        MDDSNEHK N+SPSSLK  +KSSLCLSCCLR+HRNGHHH   H H RRMS SSDGD+P PL RCSSAKDKSRS  SPE+K D RPHFISRLG H RRH S
Subjt:  MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRS--SPENK-DRRPHFISRLGRHGRRH-S

Query:  ASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY
        AS DFHYDA SY+LNFDEGYDEGHVDD FPLRNFSSRLPASPPK+ P SSS TSRE+TTAY
Subjt:  ASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)

9.7e-06

49.12

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Query:  GRHGRRHSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSS
        G    R S    F YD  SYSLNFD+G   GH DDEFP R++S R  A  P  P S+
Subjt:  GRHGRRHSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSS

AT5G14890.1 NHL domain-containing protein

7.4e-06

42.25

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Query:  FISRLGRH---------GRRHSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSS
        FI R GR+         G        F YD+ SYSLNFD+G   GH +DEFP R++S R  A  P  P S+
Subjt:  FISRLGRH---------GRRHSASADFHYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSS

AT5G35090.1 unknown protein

8.4e-10

34.69

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Query:  SLKEMLKSSLCLSCCLRKHRNGHHHHHHHHHHRRMSISSDGDMPKPL---MRCSSAKDKSRSSPENKDRRPHFISRL----------GRHGRRHSASADF
        SL++ LKS  C++ C R   N HHH +         ++++     P    M+  S +  +R+  ++ ++    I R+          G+H RRH  +ADF
Subjt:  SLKEMLKSSLCLSCCLRKHRNGHHHHHHHHHHRRMSISSDGDMPKPL---MRCSSAKDKSRSSPENKDRRPHFISRL----------GRHGRRHSASADF

Query:  HYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSN
        HYD  SY+LNFD+G ++ ++ D FPLRNFS+RLP SPP +  ++ S+
Subjt:  HYDAHSYSLNFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSN

Sequences

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CDS sequence

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ATGGACGATTCCAACGAACACAAGGGAAATTCCTCACCGTCTTCTCTCAAGGAGATGCTCAAATCCTCCCTGTGTTTGTCTTGCTGCCTCCGTAAGCACCGGAACGGCCA
CCACCACCACCATCACCACCACCACCACCGGCGGATGTCGATATCCTCCGACGGCGATATGCCAAAGCCGCTCATGCGGTGTTCCTCCGCCAAGGATAAGTCCAGATCCA
GTCCTGAGAACAAGGACAGGCGTCCGCATTTTATCTCCCGGCTCGGCCGCCATGGACGCCGTCACTCGGCGTCGGCTGATTTTCACTACGATGCGCACAGTTACTCGCTC
AATTTTGACGAAGGATACGATGAAGGCCATGTCGATGATGAGTTTCCGCTTAGGAACTTCTCGTCTAGGTTACCGGCTTCTCCGCCGAAGACACCGCCGTCTTCCTCGTC
AAATACGTCAAGGGAGATAACCACGGCGTACAGA

mRNA sequence

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Protein sequence

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MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHHHHHHHHHHRRMSISSDGDMPKPLMRCSSAKDKSRSSPENKDRRPHFISRLGRHGRRHSASADFHYDAHSYSL
NFDEGYDEGHVDDEFPLRNFSSRLPASPPKTPPSSSSNTSREITTAYR

MS005229 (gene) of Bitter gourd (TR) v1 genome