; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005248 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005248
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold83:315816..319196
RNA-Seq ExpressionMS005248
SyntenyMS005248
Gene Ontology termsGO:0000076 - DNA replication checkpoint (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0043111 - replication fork arrest (biological process)
GO:0048478 - replication fork protection (biological process)
GO:0031298 - replication fork protection complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR012923 - Chromosome segregation in meiosis protein 3
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040038 - TIPIN/Csm3/Swi3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599343.1 TIMELESS-interacting protein, partial [Cucurbita argyrosperma subsp. sororia]1.1e-12084.7Show/hide
Query:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE
        +KDNAAVA PTGCYKCGKPGHWSRDCPSSAPNP    NSSRP SSS  A AAPSKVAEKPKKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE
Subjt:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE

Query:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN---EDVNNETEAKDSEDLFDNPEEASLRNNGTD
        +SDLEN IGLYREWHSHILPYY FEHFVHKVEQVAATKRVKM LGELRE+VARGGDPTKWRESP VN   +D+NNE EAKDSE LFDN EEAS +NNG D
Subjt:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN---EDVNNETEAKDSEDLFDNPEEASLRNNGTD

Query:  DMEEDMLQEIYEKAT-EEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA
        D+EEDMLQE+YEKAT EEPL NLQSDS TIGETMEGV NQEPN SNS+ET +TE+QR RMEANRLKALERAA+KARS  TA
Subjt:  DMEEDMLQEIYEKAT-EEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA

XP_004139395.1 TIMELESS-interacting protein [Cucumis sativus]7.4e-12083.57Show/hide
Query:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE
        EKDN AV  PTGC+KCGKPGHWSRDCPSSAPNP+ T NSS PS SS    AAPSK  EKPKKAPRTRPKLTPELLLS+DGLGYVLRHFPRAFKYRGRGHE
Subjt:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE

Query:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN---EDVNNETEAKDSEDLFDNPEEASLRNNGTD
        ++DLEN IGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKM LGELRERVARGGDPTKWRE+P +N   +DVNNE EAKD +D+FDN EEASLRNNG D
Subjt:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN---EDVNNETEAKDSEDLFDNPEEASLRNNGTD

Query:  DMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSET-QITEEQRVRMEANRLKALERAASKARSLQT
        D+EEDMLQE+YEKATEEPLQN QSDS TIG TMEGV+NQEP  SNSSET ++TEEQRVRMEANRLKALERAA+KARSL T
Subjt:  DMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSET-QITEEQRVRMEANRLKALERAASKARSLQT

XP_008456510.1 PREDICTED: TIMELESS-interacting protein [Cucumis melo]1.1e-12083.75Show/hide
Query:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE
        +KDN A+A PTGCYKCGKPGHWSRDCPSSAPNP+ T NSS+P  SS  A AAPSK  EKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE
Subjt:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE

Query:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN--EDVNNETEAKDSEDLFDNPEEASLRNNGTDD
        +SDLEN IGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKM LGELRERVARGGDPTKWRE+P +N  +DVNNE EAKD E +FDNPEEASLRNNG DD
Subjt:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN--EDVNNETEAKDSEDLFDNPEEASLRNNGTDD

Query:  MEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNR----SNSSET-QITEEQRVRMEANRLKALERAASKARSLQT
        +EEDMLQE+YEKATEEPLQN QSDS T G TMEGV+NQEPN+    SNSSET ++TEEQRVRMEANRLKALERAA+KARSL T
Subjt:  MEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNR----SNSSET-QITEEQRVRMEANRLKALERAASKARSLQT

XP_022143008.1 TIMELESS-interacting protein [Momordica charantia]1.3e-148100Show/hide
Query:  KEKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGH
        KEKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGH
Subjt:  KEKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGH

Query:  EVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSEDLFDNPEEASLRNNGTDDM
        EVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSEDLFDNPEEASLRNNGTDDM
Subjt:  EVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSEDLFDNPEEASLRNNGTDDM

Query:  EEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA
        EEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA
Subjt:  EEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA

XP_038889611.1 TIMELESS-interacting protein [Benincasa hispida]8.2e-11981.16Show/hide
Query:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSS----------RPSSSS-----GAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVL
        EKDNAAVA PTGCYKCGKPGHWSRDCPSSAPNP+ T NSS           P+S+S      +A AAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVL
Subjt:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSS----------RPSSSS-----GAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVL

Query:  RHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN-EDVNNETEAKDSEDLFD
        RHFPR FKYRGRGHE+SDL N IGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKM LGELRERVARGGDPTKWRE+P +N +DVNNE EAKD E +FD
Subjt:  RHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN-EDVNNETEAKDSEDLFD

Query:  NPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQT
        N EEA LRNNG DD+EEDMLQE+YEKATEEP QN+QSDS TIGET+EGV+NQEP  SNSSETQ+TEEQR RMEANRLKALERAA+KARSL T
Subjt:  NPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQT

TrEMBL top hitse value%identityAlignment
A0A0A0LI96 CCHC-type domain-containing protein3.6e-12083.57Show/hide
Query:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE
        EKDN AV  PTGC+KCGKPGHWSRDCPSSAPNP+ T NSS PS SS    AAPSK  EKPKKAPRTRPKLTPELLLS+DGLGYVLRHFPRAFKYRGRGHE
Subjt:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE

Query:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN---EDVNNETEAKDSEDLFDNPEEASLRNNGTD
        ++DLEN IGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKM LGELRERVARGGDPTKWRE+P +N   +DVNNE EAKD +D+FDN EEASLRNNG D
Subjt:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN---EDVNNETEAKDSEDLFDNPEEASLRNNGTD

Query:  DMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSET-QITEEQRVRMEANRLKALERAASKARSLQT
        D+EEDMLQE+YEKATEEPLQN QSDS TIG TMEGV+NQEP  SNSSET ++TEEQRVRMEANRLKALERAA+KARSL T
Subjt:  DMEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSET-QITEEQRVRMEANRLKALERAASKARSLQT

A0A1S3C4P4 TIMELESS-interacting protein5.5e-12183.75Show/hide
Query:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE
        +KDN A+A PTGCYKCGKPGHWSRDCPSSAPNP+ T NSS+P  SS  A AAPSK  EKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE
Subjt:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE

Query:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN--EDVNNETEAKDSEDLFDNPEEASLRNNGTDD
        +SDLEN IGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKM LGELRERVARGGDPTKWRE+P +N  +DVNNE EAKD E +FDNPEEASLRNNG DD
Subjt:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN--EDVNNETEAKDSEDLFDNPEEASLRNNGTDD

Query:  MEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNR----SNSSET-QITEEQRVRMEANRLKALERAASKARSLQT
        +EEDMLQE+YEKATEEPLQN QSDS T G TMEGV+NQEPN+    SNSSET ++TEEQRVRMEANRLKALERAA+KARSL T
Subjt:  MEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNR----SNSSET-QITEEQRVRMEANRLKALERAASKARSLQT

A0A5D3BGW4 TIMELESS-interacting protein5.5e-12183.75Show/hide
Query:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE
        +KDN A+A PTGCYKCGKPGHWSRDCPSSAPNP+ T NSS+P  SS  A AAPSK  EKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE
Subjt:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE

Query:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN--EDVNNETEAKDSEDLFDNPEEASLRNNGTDD
        +SDLEN IGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKM LGELRERVARGGDPTKWRE+P +N  +DVNNE EAKD E +FDNPEEASLRNNG DD
Subjt:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN--EDVNNETEAKDSEDLFDNPEEASLRNNGTDD

Query:  MEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNR----SNSSET-QITEEQRVRMEANRLKALERAASKARSLQT
        +EEDMLQE+YEKATEEPLQN QSDS T G TMEGV+NQEPN+    SNSSET ++TEEQRVRMEANRLKALERAA+KARSL T
Subjt:  MEEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNR----SNSSET-QITEEQRVRMEANRLKALERAASKARSLQT

A0A6J1CPN9 TIMELESS-interacting protein6.3e-149100Show/hide
Query:  KEKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGH
        KEKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGH
Subjt:  KEKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGH

Query:  EVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSEDLFDNPEEASLRNNGTDDM
        EVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSEDLFDNPEEASLRNNGTDDM
Subjt:  EVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSEDLFDNPEEASLRNNGTDDM

Query:  EEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA
        EEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA
Subjt:  EEDMLQEIYEKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA

A0A6J1G4B9 TIMELESS-interacting protein6.8e-11984.04Show/hide
Query:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE
        +KDNAAVA PTGCYKCGKPGHWSRDCPSSAPNP    NSS P SSS  A AAPSKVAEKPKKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE
Subjt:  EKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHE

Query:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN---EDVNNETEAKDSEDLFDNPEEASLRNNGTD
        +SDLEN IGLYREWHSHILPYY FEHFVHKVEQVAATKRVKM LGELRE+VARGGDPTKWRESP VN   +D+NNE EAKDSE LFDN EEAS +NNG D
Subjt:  VSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN---EDVNNETEAKDSEDLFDNPEEASLRNNGTD

Query:  DMEEDMLQEIYEKAT-EEPLQNLQSDSHTIGETMEGVSNQ-EPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA
        D+EEDMLQE+YEKAT EEPL NLQSDS TIGETMEGV NQ EPN SNS+ET +TE+QR RMEANRLKALERAA+KARS  TA
Subjt:  DMEEDMLQEIYEKAT-EEPLQNLQSDSHTIGETMEGVSNQ-EPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA

SwissProt top hitse value%identityAlignment
Q3ZCC4 TIMELESS-interacting protein1.8e-0426.03Show/hide
Query:  PSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILPYYSFEH
        P+S    D         S  GA    P K     +   R  PKL  E L+SE GL   LRH     K++G+GHE  DL+  I     W   + P   FE 
Subjt:  PSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILPYYSFEH

Query:  FVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDV---NNETEAKDSEDL------------FDNPEEASLRNNGTDDMEEDMLQEIYEKA
        F+ +VE +   K V+  L  +R             + P ++ED    N+E E  +  D+            + + E AS  +    + E+  ++   + A
Subjt:  FVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDV---NNETEAKDSEDL------------FDNPEEASLRNNGTDDMEEDMLQEIYEKA

Query:  TEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQR
         E     L S+S ++G  +   S   P+   S      EEQ+
Subjt:  TEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQR

Q5F416 TIMELESS-interacting protein8.2e-0527.1Show/hide
Query:  PPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFI
        PPT       PG    +   +  +PD    S    SSS A            K   R+ PKL    L+SE GL   LRH     K++G+GHE  DL+  +
Subjt:  PPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFI

Query:  GLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSEDLFDNPEEASLRNNGTDDMEEDMLQEIY
             W   + P   F+ F+ +VE +   K V+  L  +R             + P ++ED             F   E     +NG D           
Subjt:  GLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSEDLFDNPEEASLRNNGTDDMEEDMLQEIY

Query:  EKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASK
          ATEE    + S S  +GE             +   T +TEEQ+ R++ NR  ALER  +K
Subjt:  EKATEEPLQNLQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASK

Q91WA1 TIMELESS-interacting protein7.4e-0628.63Show/hide
Query:  PSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILPYYSFEH
        P ++P  D     + P   SG+    P K     +   R  PKL    L SE GL   LRH     K++G+GHE  DL+  I     W   + P   FE 
Subjt:  PSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILPYYSFEH

Query:  FVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNED-VNNETEAKDSEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHT
        F+ +VE +   K V+  L  +R             + P V+ED VNN  E  ++              NG D                +P     SDS  
Subjt:  FVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNED-VNNETEAKDSEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNLQSDSHT

Query:  IGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARS
                   EP RS      +TEEQ+ R+E N+  ALER  +K  S
Subjt:  IGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARS

Q9BVW5 TIMELESS-interacting protein4.1e-0425.96Show/hide
Query:  PSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILPYYSFEH
        P+S    D         S +GA    P K     +   R  PKL  + L+SE GL   LRH     K++G+GHE  DL+  I     W   + P   FE 
Subjt:  PSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIGLYREWHSHILPYYSFEH

Query:  FVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDV--NNETEAKDSE------DLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQN
        F+ +VE + + K V+  L  +R  +     P    +  + N++V  NNE +   +E      +L ++   AS  +    + ++  ++   + A E     
Subjt:  FVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDV--NNETEAKDSE------DLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQN

Query:  LQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQR
        L S+S T+G  M       P      E    E+Q+
Subjt:  LQSDSHTIGETMEGVSNQEPNRSNSSETQITEEQR

Arabidopsis top hitse value%identityAlignment
AT3G02820.1 zinc knuckle (CCHC-type) family protein2.0e-5951.75Show/hide
Query:  PTGCYKCGKPGHWSRDCPSSAP--NPDSTFNSSRP----------SSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGR
        PTGC+KCG+PGHWSRDCPSSAP    +S  +SS P          SSS    + AP   A K  K    RPKLTPELLLSEDGLGYVLR+FP++FKYRGR
Subjt:  PTGCYKCGKPGHWSRDCPSSAP--NPDSTFNSSRP----------SSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGR

Query:  GHEVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN----EDVNNETEAKDSEDLFDNPEEASLRN
        G EVSDL N I LY EWH+H+LPYYSF+HFVHKV+QVA+TKRVK  + ELRERVA G DP K  E    N    +D + +  + D E++   P ++   +
Subjt:  GHEVSDLENFIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVN----EDVNNETEAKDSEDLFDNPEEASLRN

Query:  NGTDDMEEDMLQEIYEKATEEPL--QNLQSDSHTIGETMEGVSNQEPNRSNSSE--TQITEEQRVRMEANRLKALERAASKARSLQ
           D  E+ ML EI++ A++ P   QN+   S     T E  +  E NR  + E    I+EEQRVRMEANRLKALERA ++ +  Q
Subjt:  NGTDDMEEDMLQEIYEKATEEPL--QNLQSDSHTIGETMEGVSNQEPNRSNSSE--TQITEEQRVRMEANRLKALERAASKARSLQ

AT3G42860.1 zinc knuckle (CCHC-type) family protein1.4e-0457.14Show/hide
Query:  CYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSG
        C+KCGKPGHWSRDC + + NP       + SSSSG
Subjt:  CYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGAGAAGGACAACGCCGCCGTCGCACCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCATTGGTCTCGAGATTGTCCCTCCTCCGCTCCTAATCCCGATTCCAC
TTTCAATTCTTCCAGACCTTCTTCCTCTTCTGGCGCTGCTGCTGCTGCGCCTTCGAAAGTTGCAGAGAAGCCCAAGAAGGCGCCCAGAACCAGGCCCAAGCTCACTCCCG
AGCTACTTCTCTCTGAGGATGGCCTCGGTTACGTTCTTCGCCATTTTCCTCGCGCTTTCAAATATCGCGGCCGTGGACACGAGGTCAGTGATTTGGAAAACTTTATTGGC
TTATACAGGGAATGGCATTCTCATATACTCCCTTACTACTCCTTCGAACATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTTAAGATGAGTCTTGGAGA
ACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGCGAGTCACCCACTGTAAATGAAGACGTCAATAATGAAACAGAAGCCAAAGACTCGGAGGACTTAT
TTGATAATCCGGAAGAGGCTTCTTTGAGGAATAATGGTACTGATGACATGGAAGAAGACATGCTTCAGGAAATTTACGAGAAAGCTACTGAAGAGCCTCTGCAGAACTTA
CAAAGTGATTCCCACACCATTGGGGAAACTATGGAAGGTGTGAGCAACCAAGAGCCAAATAGAAGCAATTCAAGTGAAACTCAGATCACAGAGGAACAGAGAGTTCGAAT
GGAAGCAAACAGGTTGAAGGCATTAGAAAGGGCTGCAAGCAAGGCCCGCTCCTTGCAGACTGCC
mRNA sequenceShow/hide mRNA sequence
AAGGAGAAGGACAACGCCGCCGTCGCACCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCATTGGTCTCGAGATTGTCCCTCCTCCGCTCCTAATCCCGATTCCAC
TTTCAATTCTTCCAGACCTTCTTCCTCTTCTGGCGCTGCTGCTGCTGCGCCTTCGAAAGTTGCAGAGAAGCCCAAGAAGGCGCCCAGAACCAGGCCCAAGCTCACTCCCG
AGCTACTTCTCTCTGAGGATGGCCTCGGTTACGTTCTTCGCCATTTTCCTCGCGCTTTCAAATATCGCGGCCGTGGACACGAGGTCAGTGATTTGGAAAACTTTATTGGC
TTATACAGGGAATGGCATTCTCATATACTCCCTTACTACTCCTTCGAACATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTTAAGATGAGTCTTGGAGA
ACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGCGAGTCACCCACTGTAAATGAAGACGTCAATAATGAAACAGAAGCCAAAGACTCGGAGGACTTAT
TTGATAATCCGGAAGAGGCTTCTTTGAGGAATAATGGTACTGATGACATGGAAGAAGACATGCTTCAGGAAATTTACGAGAAAGCTACTGAAGAGCCTCTGCAGAACTTA
CAAAGTGATTCCCACACCATTGGGGAAACTATGGAAGGTGTGAGCAACCAAGAGCCAAATAGAAGCAATTCAAGTGAAACTCAGATCACAGAGGAACAGAGAGTTCGAAT
GGAAGCAAACAGGTTGAAGGCATTAGAAAGGGCTGCAAGCAAGGCCCGCTCCTTGCAGACTGCC
Protein sequenceShow/hide protein sequence
KEKDNAAVAPPTGCYKCGKPGHWSRDCPSSAPNPDSTFNSSRPSSSSGAAAAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEVSDLENFIG
LYREWHSHILPYYSFEHFVHKVEQVAATKRVKMSLGELRERVARGGDPTKWRESPTVNEDVNNETEAKDSEDLFDNPEEASLRNNGTDDMEEDMLQEIYEKATEEPLQNL
QSDSHTIGETMEGVSNQEPNRSNSSETQITEEQRVRMEANRLKALERAASKARSLQTA